BLASTX nr result

ID: Acanthopanax21_contig00003696 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003696
         (1434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPD85045.1| hypothetical protein GOBAR_DD17998 [Gossypium bar...    67   5e-09
gb|PKI45596.1| hypothetical protein CRG98_033912 [Punica granatum]     68   1e-08

>gb|PPD85045.1| hypothetical protein GOBAR_DD17998 [Gossypium barbadense]
          Length = 194

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 36/62 (58%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
 Frame = +3

Query: 648 TAFFFFLAKQKRPNARNARKNAPPSEAHTTITVVWLLPPP---DGGGTKTSDM--GGTEL 812
           T FFF LAKQ  P  RNARKNAPP +  T I VVWL PPP     GGT TSD   G  EL
Sbjct: 2   TGFFFLLAKQMNPTRRNARKNAPPRDTQTAIIVVWLPPPPPPGSDGGTVTSDSDDGDREL 61

Query: 813 NE 818
            +
Sbjct: 62  KD 63


>gb|PKI45596.1| hypothetical protein CRG98_033912 [Punica granatum]
          Length = 373

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
 Frame = +3

Query: 600 PY*LLSWPYA-------AAAGIKTAFFFFLAKQKRPNARNARKNAPPSEAHTTITVVWLL 758
           P  +LSW  +       AAAG  T FFFFLA+Q RP ARNARK   P E  T I VVW  
Sbjct: 8   PMVILSWTTSCSSTITGAAAGTITGFFFFLARQNRPAARNARKKTDPKETQTMIIVVWW- 66

Query: 759 PPPDGGGTKTSDMGGTE 809
            PP+GG T + + GG +
Sbjct: 67  -PPEGGATISVEEGGRD 82


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