BLASTX nr result

ID: Acanthopanax21_contig00003682 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003682
         (634 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020423565.1| leucine-rich repeat extensin-like protein 4 ...    67   3e-09

>ref|XP_020423565.1| leucine-rich repeat extensin-like protein 4 isoform X1 [Prunus
           persica]
          Length = 833

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 49/112 (43%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
 Frame = -3

Query: 632 HPQYTYLHRHQFITTPHLHHRLHRQFTIIHHHRHPQFTTIXXXXXXXXXXXXXHVKILPH 453
           HPQ+ ++ RH  I   H HHR HR  TI H HR   F T+                   H
Sbjct: 702 HPQF-HVKRHHLIH--HHHHRRHRFTTIPHPHR---FLTV-------------------H 736

Query: 452 PRRSS-MGAHHLHLQYMKGHCRQSSEFHTHL--HHPHLSIDSFSDF-PLTFP 309
            RR   M AH L L YM+ HC  S EFHT L  HHP +  DSF +F PLTFP
Sbjct: 737 QRRQLFMKAHRLPLLYMRAHCHPSLEFHTRLLRHHPSID-DSFENFPPLTFP 787


Top