BLASTX nr result

ID: Acanthopanax21_contig00003504 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003504
         (961 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004222334.1| hypothetical protein BevumaM_p100 (mitochond...    65   5e-09
dbj|BAD66717.1| orf169 (mitochondrion) [Beta vulgaris subsp. vul...    65   5e-09
ref|NP_064093.1| orf211 gene product (mitochondrion) [Beta vulga...    65   1e-08

>ref|YP_004222334.1| hypothetical protein BevumaM_p100 (mitochondrion) [Beta vulgaris
           subsp. maritima]
 ref|YP_004842140.1| hypothetical protein BemaM_p096 (mitochondrion) [Beta macrocarpa]
 emb|CBJ14065.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBJ17556.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBJ20726.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBX24945.1| hypothetical protein (mitochondrion) [Beta macrocarpa]
 emb|CBL51974.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 169

 Score = 65.1 bits (157), Expect = 5e-09
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +3

Query: 597 PRSVGPTTTRGNHTRTNEISLSLTLWRQKPVSPAKAHRGVSR 722
           P+SVGPTTTR NHTRTNEI LSL  +  KPVSPA+AHRGVSR
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSPARAHRGVSR 101


>dbj|BAD66717.1| orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 169

 Score = 65.1 bits (157), Expect = 5e-09
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +3

Query: 597 PRSVGPTTTRGNHTRTNEISLSLTLWRQKPVSPAKAHRGVSR 722
           P+SVGPTTTR NHTRTNEI LSL  +  KPVSPA+AHRGVSR
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSPARAHRGVSR 101


>ref|NP_064093.1| orf211 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
 dbj|BAA99486.1| orf211 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 211

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +3

Query: 597 PRSVGPTTTRGNHTRTNEISLSLTLWRQKPVSPAKAHRGVSR 722
           P+SVGPTTTR NHTRTNEI LSL  +  KPVSPA+AHRGVSR
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSPARAHRGVSR 101


Top