BLASTX nr result

ID: Acanthopanax21_contig00003481 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003481
         (499 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPS08355.1| hypothetical protein GOBAR_AA12284 [Gossypium bar...    75   5e-18
gb|PNY05945.1| hypothetical protein L195_g002405 [Trifolium prat...    54   2e-06

>gb|PPS08355.1| hypothetical protein GOBAR_AA12284 [Gossypium barbadense]
          Length = 555

 Score = 74.7 bits (182), Expect(3) = 5e-18
 Identities = 37/40 (92%), Positives = 37/40 (92%)
 Frame = +3

Query: 378 PLLITSHRTQNGLIVNGIRTAIPSPTSACTPERGAPLASD 497
           PLLITSHRTQNGLIVNGIRTAIPSPTSAC  ER APLASD
Sbjct: 413 PLLITSHRTQNGLIVNGIRTAIPSPTSACMLERRAPLASD 452



 Score = 38.5 bits (88), Expect(3) = 5e-18
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +1

Query: 178 KKLIIELDRKDERRAKVAIA 237
           KKLIIELDRKDE RAKVAIA
Sbjct: 373 KKLIIELDRKDEHRAKVAIA 392



 Score = 25.0 bits (53), Expect(3) = 5e-18
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 251 GAENEVKVSVD 283
           GAENEVKVSVD
Sbjct: 397 GAENEVKVSVD 407


>gb|PNY05945.1| hypothetical protein L195_g002405 [Trifolium pratense]
          Length = 109

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +1

Query: 82  DGYPSGPEDTSDDEVPTMMTCNVISVRTD 168
           DGY SGPEDT DDEVP MMTC VISVRTD
Sbjct: 81  DGYLSGPEDTCDDEVPMMMTCYVISVRTD 109


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