BLASTX nr result
ID: Acanthopanax21_contig00003414
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00003414
(494 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|POO03063.1| Lupus La protein [Trema orientalis] 81 9e-15
gb|PON49188.1| Lupus La protein [Parasponia andersonii] 81 9e-15
gb|KZN04027.1| hypothetical protein DCAR_004825 [Daucus carota s... 80 1e-14
gb|OVA10491.1| RNA recognition motif domain [Macleaya cordata] 79 2e-14
ref|XP_010647782.1| PREDICTED: la-related protein 6C isoform X2 ... 80 2e-14
ref|XP_002281817.1| PREDICTED: la-related protein 6C isoform X1 ... 80 2e-14
ref|XP_017233002.1| PREDICTED: la-related protein 6C [Daucus car... 80 2e-14
emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera] 80 2e-14
ref|XP_015576464.1| PREDICTED: la-related protein 6C isoform X2 ... 80 2e-14
ref|XP_002521842.1| PREDICTED: la-related protein 6C isoform X1 ... 80 2e-14
ref|XP_024167986.1| la-related protein 6C [Rosa chinensis] >gi|1... 79 4e-14
ref|XP_004292453.1| PREDICTED: la-related protein 6C [Fragaria v... 79 4e-14
gb|PPD81980.1| hypothetical protein GOBAR_DD21108 [Gossypium bar... 77 2e-13
gb|KVH93263.1| Ataxin-2, C-terminal [Cynara cardunculus var. sco... 77 2e-13
gb|PPR84688.1| hypothetical protein GOBAR_AA36025 [Gossypium bar... 77 2e-13
ref|XP_017632446.1| PREDICTED: la-related protein 6C [Gossypium ... 77 2e-13
ref|XP_016714523.1| PREDICTED: la-related protein 6C-like [Gossy... 77 2e-13
ref|XP_021651645.1| la-related protein 6C-like [Hevea brasiliensis] 77 2e-13
ref|XP_012480272.1| PREDICTED: la-related protein 6C [Gossypium ... 77 2e-13
ref|XP_010930389.1| PREDICTED: la-related protein 6C isoform X2 ... 77 3e-13
>gb|POO03063.1| Lupus La protein [Trema orientalis]
Length = 404
Score = 80.9 bits (198), Expect = 9e-15
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICT 149
Q+H+GRGL++PSPQ S QCEGS TK +KGPRMPDGTRGFTMGRGKP+ T
Sbjct: 343 QNHSGRGLIAPSPQSSTGIQCEGS-TKHGSKGPRMPDGTRGFTMGRGKPLST 393
>gb|PON49188.1| Lupus La protein [Parasponia andersonii]
Length = 404
Score = 80.9 bits (198), Expect = 9e-15
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICT 149
Q+H+GRGL++PSPQ S QCEGS TK +KGPRMPDGTRGFTMGRGKP+ T
Sbjct: 343 QNHSGRGLIAPSPQSSSGIQCEGS-TKHGSKGPRMPDGTRGFTMGRGKPLST 393
>gb|KZN04027.1| hypothetical protein DCAR_004825 [Daucus carota subsp. sativus]
Length = 366
Score = 80.1 bits (196), Expect = 1e-14
Identities = 38/52 (73%), Positives = 40/52 (76%)
Frame = -2
Query: 292 GRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISA 137
GRG L SP S S CEGSSTK TKGPRMPDGTRGFT+GRGKPICT +A
Sbjct: 311 GRGSLLSSPMSSSSPLCEGSSTKQATKGPRMPDGTRGFTLGRGKPICTSSAA 362
>gb|OVA10491.1| RNA recognition motif domain [Macleaya cordata]
Length = 309
Score = 79.3 bits (194), Expect = 2e-14
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -2
Query: 307 TQSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPI 155
+Q+H+GRGL++PSPQ S QCE S+ K +GPRMPDGTRGFTMGRGKP+
Sbjct: 246 SQNHSGRGLIAPSPQSCSSIQCEASTNKHTPRGPRMPDGTRGFTMGRGKPL 296
>ref|XP_010647782.1| PREDICTED: la-related protein 6C isoform X2 [Vitis vinifera]
Length = 406
Score = 80.1 bits (196), Expect = 2e-14
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = -2
Query: 307 TQSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISAGPM 128
TQ +GRGLL+PSPQ S S Q E S+ K +TKGPRMPDGTRGFTMGRGKPI T A P+
Sbjct: 346 TQITSGRGLLAPSPQSSGSNQFEASA-KQITKGPRMPDGTRGFTMGRGKPISTPALASPL 404
>ref|XP_002281817.1| PREDICTED: la-related protein 6C isoform X1 [Vitis vinifera]
emb|CBI32464.3| unnamed protein product, partial [Vitis vinifera]
Length = 412
Score = 80.1 bits (196), Expect = 2e-14
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = -2
Query: 307 TQSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISAGPM 128
TQ +GRGLL+PSPQ S S Q E S+ K +TKGPRMPDGTRGFTMGRGKPI T A P+
Sbjct: 352 TQITSGRGLLAPSPQSSGSNQFEASA-KQITKGPRMPDGTRGFTMGRGKPISTPALASPL 410
>ref|XP_017233002.1| PREDICTED: la-related protein 6C [Daucus carota subsp. sativus]
Length = 441
Score = 80.1 bits (196), Expect = 2e-14
Identities = 38/52 (73%), Positives = 40/52 (76%)
Frame = -2
Query: 292 GRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISA 137
GRG L SP S S CEGSSTK TKGPRMPDGTRGFT+GRGKPICT +A
Sbjct: 386 GRGSLLSSPMSSSSPLCEGSSTKQATKGPRMPDGTRGFTLGRGKPICTSSAA 437
>emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
Length = 941
Score = 80.1 bits (196), Expect = 2e-14
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = -2
Query: 307 TQSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISAGPM 128
TQ +GRGLL+PSPQ S S Q E S+ K +TKGPRMPDGTRGFTMGRGKPI T A P+
Sbjct: 336 TQITSGRGLLAPSPQSSGSNQFEASA-KQITKGPRMPDGTRGFTMGRGKPISTPALASPL 394
>ref|XP_015576464.1| PREDICTED: la-related protein 6C isoform X2 [Ricinus communis]
Length = 434
Score = 79.7 bits (195), Expect = 2e-14
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISAGPM 128
QSH GRGLL+PSPQ S QCE S+ K +KGPRMPDGTRGFTMGRGKP+ T A M
Sbjct: 375 QSHGGRGLLAPSPQSVSSPQCEASA-KHTSKGPRMPDGTRGFTMGRGKPLGTPTLASSM 432
>ref|XP_002521842.1| PREDICTED: la-related protein 6C isoform X1 [Ricinus communis]
gb|EEF40478.1| lupus la ribonucleoprotein, putative [Ricinus communis]
Length = 440
Score = 79.7 bits (195), Expect = 2e-14
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISAGPM 128
QSH GRGLL+PSPQ S QCE S+ K +KGPRMPDGTRGFTMGRGKP+ T A M
Sbjct: 381 QSHGGRGLLAPSPQSVSSPQCEASA-KHTSKGPRMPDGTRGFTMGRGKPLGTPTLASSM 438
>ref|XP_024167986.1| la-related protein 6C [Rosa chinensis]
gb|PRQ23238.1| putative lupus La protein [Rosa chinensis]
Length = 400
Score = 79.0 bits (193), Expect = 4e-14
Identities = 46/103 (44%), Positives = 55/103 (53%)
Frame = -2
Query: 448 EVPGLGLSEDSSQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTQSHNGRGLLSPS 269
+ P +EDSSQP R+ S +GRGL++PS
Sbjct: 298 DTPHYESAEDSSQPSHIDLVIDSMNAEENSMGSKKGWAWGRGKARGRSASQSGRGLIAPS 357
Query: 268 PQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQIS 140
PQ SC+ QCE S+ K TKGPRMPDGTRGFTMGRGKP+ T S
Sbjct: 358 PQSSCAIQCEASA-KPNTKGPRMPDGTRGFTMGRGKPLKTTSS 399
>ref|XP_004292453.1| PREDICTED: la-related protein 6C [Fragaria vesca subsp. vesca]
Length = 401
Score = 79.0 bits (193), Expect = 4e-14
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -2
Query: 301 SHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQIS 140
S +GRGL++PSPQ SC+ QCE S+ K TKGPRMPDGTRGFTMGRGKP+ T S
Sbjct: 348 SQSGRGLIAPSPQSSCAIQCEASA-KPNTKGPRMPDGTRGFTMGRGKPLRTSSS 400
>gb|PPD81980.1| hypothetical protein GOBAR_DD21108 [Gossypium barbadense]
Length = 358
Score = 77.0 bits (188), Expect = 2e-13
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPI 155
Q+H+GRGLL+ SPQ S + QCE +S K +TKGPRMPDGTRGFTMGRGKP+
Sbjct: 305 QNHSGRGLLAASPQPSNAVQCE-ASVKQITKGPRMPDGTRGFTMGRGKPL 353
>gb|KVH93263.1| Ataxin-2, C-terminal [Cynara cardunculus var. scolymus]
Length = 418
Score = 77.0 bits (188), Expect = 2e-13
Identities = 39/54 (72%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -2
Query: 307 TQSHNGRGLLSPSPQLSCST-QCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICT 149
T SH+ RGLLSPSPQ S S E SSTK KGPRMPDGTRGFTMGRGKPI +
Sbjct: 356 TPSHSSRGLLSPSPQTSSSVVHLEASSTKQSAKGPRMPDGTRGFTMGRGKPIAS 409
>gb|PPR84688.1| hypothetical protein GOBAR_AA36025 [Gossypium barbadense]
Length = 429
Score = 77.0 bits (188), Expect = 2e-13
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPI 155
Q+H+GRGLL+ SPQ S + QCE +S K +TKGPRMPDGTRGFTMGRGKP+
Sbjct: 376 QNHSGRGLLAASPQPSNAVQCE-ASVKQITKGPRMPDGTRGFTMGRGKPL 424
>ref|XP_017632446.1| PREDICTED: la-related protein 6C [Gossypium arboreum]
Length = 431
Score = 77.0 bits (188), Expect = 2e-13
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPI 155
Q+H+GRGLL+ SPQ S + QCE +S K +TKGPRMPDGTRGFTMGRGKP+
Sbjct: 378 QNHSGRGLLAASPQPSNAVQCE-ASVKQITKGPRMPDGTRGFTMGRGKPL 426
>ref|XP_016714523.1| PREDICTED: la-related protein 6C-like [Gossypium hirsutum]
Length = 431
Score = 77.0 bits (188), Expect = 2e-13
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPI 155
Q+H+GRGLL+ SPQ S + QCE +S K +TKGPRMPDGTRGFTMGRGKP+
Sbjct: 378 QNHSGRGLLAASPQPSNAVQCE-ASVKQITKGPRMPDGTRGFTMGRGKPL 426
>ref|XP_021651645.1| la-related protein 6C-like [Hevea brasiliensis]
Length = 434
Score = 77.0 bits (188), Expect = 2e-13
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISAGPM 128
QSH GRGLL+PSPQ S QCE S K +GPRMPDGTRGFTMGRGKP+ + PM
Sbjct: 375 QSHGGRGLLAPSPQSVSSPQCEASG-KHTFRGPRMPDGTRGFTMGRGKPLGSPAVGSPM 432
>ref|XP_012480272.1| PREDICTED: la-related protein 6C [Gossypium raimondii]
gb|KJB32421.1| hypothetical protein B456_005G240000 [Gossypium raimondii]
Length = 435
Score = 77.0 bits (188), Expect = 2e-13
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPI 155
Q+H+GRGLL+ SPQ S + QCE +S K +TKGPRMPDGTRGFTMGRGKP+
Sbjct: 382 QNHSGRGLLAASPQPSNAVQCE-ASVKQITKGPRMPDGTRGFTMGRGKPL 430
>ref|XP_010930389.1| PREDICTED: la-related protein 6C isoform X2 [Elaeis guineensis]
Length = 412
Score = 76.6 bits (187), Expect = 3e-13
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = -2
Query: 304 QSHNGRGLLSPSPQLSCSTQCEGSSTKLVTKGPRMPDGTRGFTMGRGKPICTQISAGPM 128
Q+HNGRGLLS +PQ C Q E SS +++ +GPRMPDGTRGFTMGRGKP+ + A P+
Sbjct: 345 QNHNGRGLLSQTPQPGCLGQSEASSKQML-QGPRMPDGTRGFTMGRGKPLTPVLPASPL 402