BLASTX nr result

ID: Acanthopanax21_contig00003123 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003123
         (623 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KUM45565.1| hypothetical protein ABT39_MTgene2400 (mitochondr...   100   9e-33

>gb|KUM45565.1| hypothetical protein ABT39_MTgene2400 (mitochondrion) [Picea
           glauca]
 gb|KUM45572.1| hypothetical protein ABT39_MTgene2407 (mitochondrion) [Picea
           glauca]
 gb|KUM46366.1| hypothetical protein ABT39_MTgene1465 (mitochondrion) [Picea
           glauca]
 gb|KUM47451.1| hypothetical protein ABT39_MTgene5637 (mitochondrion) [Picea
           glauca]
          Length = 152

 Score =  100 bits (249), Expect(2) = 9e-33
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = -1

Query: 314 DWFSYSSIPGEKESALLLPIFIASSSDLRVRLGDIFFLAQSLSPDLDSTGKKNYRVR 144
           DWFSYSSIPGEKES LLL IFIASSSDLRVRLGDIFFLAQSLSPDLDSTGK+ + +R
Sbjct: 94  DWFSYSSIPGEKESQLLLQIFIASSSDLRVRLGDIFFLAQSLSPDLDSTGKRLFAMR 150



 Score = 68.2 bits (165), Expect(2) = 9e-33
 Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
 Frame = -3

Query: 513 KRASQDFHKKAGLGWVKPLLGTKVSHKKGLSGY*L---LPCRYYRGLLSTKSDLLTGFGK 343
           K++     +++   WVKP LGTKVSHKK  +       LP    RGLLSTK+DLLTGFGK
Sbjct: 25  KKSKPRLSQESWTWWVKPPLGTKVSHKKQGAKRVFTPPLPLLPARGLLSTKADLLTGFGK 84

Query: 342 AYKDYSKTM 316
           AY DYSKTM
Sbjct: 85  AYLDYSKTM 93


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