BLASTX nr result
ID: Acanthopanax21_contig00003090
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00003090
(438 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23183.3| unnamed protein product, partial [Vitis vinifera] 83 1e-15
ref|XP_019078215.1| PREDICTED: polyadenylation and cleavage fact... 83 1e-15
ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage fact... 83 1e-15
ref|XP_006606037.1| PREDICTED: polyadenylation and cleavage fact... 80 9e-15
ref|XP_018837816.1| PREDICTED: polyadenylation and cleavage fact... 76 1e-14
ref|XP_008224793.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 79 3e-14
ref|XP_021821490.1| polyadenylation and cleavage factor homolog ... 79 3e-14
ref|XP_020417206.1| polyadenylation and cleavage factor homolog ... 79 3e-14
ref|XP_009340948.1| PREDICTED: polyadenylation and cleavage fact... 78 6e-14
gb|KRH35572.1| hypothetical protein GLYMA_10G251100 [Glycine max] 78 8e-14
gb|KRH35570.1| hypothetical protein GLYMA_10G251100 [Glycine max] 78 8e-14
gb|KRH35571.1| hypothetical protein GLYMA_10G251100 [Glycine max] 78 8e-14
ref|XP_006589602.1| PREDICTED: polyadenylation and cleavage fact... 78 8e-14
gb|KHN02687.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Glycin... 78 8e-14
ref|XP_024024698.1| polyadenylation and cleavage factor homolog ... 77 1e-13
ref|XP_024024697.1| polyadenylation and cleavage factor homolog ... 77 1e-13
ref|XP_024024696.1| polyadenylation and cleavage factor homolog ... 77 1e-13
ref|XP_017236138.1| PREDICTED: polyadenylation and cleavage fact... 77 1e-13
ref|XP_017236137.1| PREDICTED: polyadenylation and cleavage fact... 77 1e-13
ref|XP_006383938.1| hypothetical protein POPTR_0004s01970g [Popu... 77 1e-13
>emb|CBI23183.3| unnamed protein product, partial [Vitis vinifera]
Length = 1003
Score = 82.8 bits (203), Expect = 1e-15
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
Y+N+ GSAAGMDRS LGPIVHAKCRSESNVVS ED ++E G +EEGS+ KRMR
Sbjct: 948 YLNAPEGSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1002
>ref|XP_019078215.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Vitis vinifera]
Length = 1033
Score = 82.8 bits (203), Expect = 1e-15
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
Y+N+ GSAAGMDRS LGPIVHAKCRSESNVVS ED ++E G +EEGS+ KRMR
Sbjct: 978 YLNAPEGSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1032
>ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Vitis vinifera]
Length = 1046
Score = 82.8 bits (203), Expect = 1e-15
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
Y+N+ GSAAGMDRS LGPIVHAKCRSESNVVS ED ++E G +EEGS+ KRMR
Sbjct: 991 YLNAPEGSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1045
>ref|XP_006606037.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Glycine max]
gb|KRG91241.1| hypothetical protein GLYMA_20G142500 [Glycine max]
Length = 937
Score = 80.5 bits (197), Expect = 9e-15
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ TG+ AGMDR+ LGPI+HAKCRSESN+ +SEDL +E G EEGSQ KRMR+
Sbjct: 882 YLNAPTGTTAGMDRTQLGPIIHAKCRSESNMATSEDLGPDEKGADEEGSQRKRMRS 937
>ref|XP_018837816.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Juglans regia]
Length = 151
Score = 75.9 bits (185), Expect = 1e-14
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
Y+N +G AGMDRS LGPIVHAKCRSES+VVS ED ++E G EGSQ KRMR
Sbjct: 95 YLNMPSGLTAGMDRSQLGPIVHAKCRSESSVVSPEDFRQDERGITAEGSQSKRMR 149
>ref|XP_008224793.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Prunus mume]
Length = 1002
Score = 79.0 bits (193), Expect = 3e-14
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ GS GMDRS LGPIVHAKCRSES+VVSS L ++E G IEEGSQ KR+R+
Sbjct: 947 YLNAPDGSTGGMDRSQLGPIVHAKCRSESSVVSSGGLGQDEVGIIEEGSQRKRLRS 1002
>ref|XP_021821490.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Prunus
avium]
Length = 1017
Score = 79.0 bits (193), Expect = 3e-14
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ GS GMDRS LGPIVHAKCRSES+VVSS L ++E G IEEGSQ KR+R+
Sbjct: 962 YLNAPDGSTGGMDRSQLGPIVHAKCRSESSVVSSGGLGQDEVGIIEEGSQRKRLRS 1017
>ref|XP_020417206.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Prunus
persica]
gb|ONI10047.1| hypothetical protein PRUPE_4G024700 [Prunus persica]
Length = 1017
Score = 79.0 bits (193), Expect = 3e-14
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ GS GMDRS LGPIVHAKCRSES+VVSS L ++E G IEEGSQ KR+R+
Sbjct: 962 YLNAPDGSTGGMDRSQLGPIVHAKCRSESSVVSSGGLGQDEVGIIEEGSQRKRLRS 1017
>ref|XP_009340948.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Pyrus x bretschneideri]
Length = 975
Score = 78.2 bits (191), Expect = 6e-14
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
YMN+ G+ GMDRS LGPIVHAKCRSESNVVS E +++ G IEEGSQ KR+R+
Sbjct: 920 YMNAPDGATGGMDRSQLGPIVHAKCRSESNVVSPEGFGQDQGGIIEEGSQRKRLRS 975
>gb|KRH35572.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 614
Score = 77.8 bits (190), Expect = 8e-14
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ G AGMDRS LGPI+HAKCRSESN+ +SEDL +E G EEGSQ KRMR+
Sbjct: 559 YLNAPLGITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 614
>gb|KRH35570.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 713
Score = 77.8 bits (190), Expect = 8e-14
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ G AGMDRS LGPI+HAKCRSESN+ +SEDL +E G EEGSQ KRMR+
Sbjct: 658 YLNAPLGITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 713
>gb|KRH35571.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 823
Score = 77.8 bits (190), Expect = 8e-14
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ G AGMDRS LGPI+HAKCRSESN+ +SEDL +E G EEGSQ KRMR+
Sbjct: 768 YLNAPLGITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 823
>ref|XP_006589602.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Glycine max]
gb|KRH35569.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 922
Score = 77.8 bits (190), Expect = 8e-14
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ G AGMDRS LGPI+HAKCRSESN+ +SEDL +E G EEGSQ KRMR+
Sbjct: 867 YLNAPLGITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 922
>gb|KHN02687.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Glycine soja]
Length = 928
Score = 77.8 bits (190), Expect = 8e-14
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+N+ G AGMDRS LGPI+HAKCRSESN+ +SEDL +E G EEGSQ KRMR+
Sbjct: 873 YLNAPLGITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 928
>ref|XP_024024698.1| polyadenylation and cleavage factor homolog 4 isoform X3 [Morus
notabilis]
Length = 871
Score = 77.4 bits (189), Expect = 1e-13
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
Y+N++ GS GMDRS LGPIVHAKCRSES+V SE +NE G EEGSQ KR+R
Sbjct: 816 YLNAMNGSTTGMDRSQLGPIVHAKCRSESSVAPSEGFGQNEGGATEEGSQRKRLR 870
>ref|XP_024024697.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Morus
notabilis]
Length = 873
Score = 77.4 bits (189), Expect = 1e-13
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
Y+N++ GS GMDRS LGPIVHAKCRSES+V SE +NE G EEGSQ KR+R
Sbjct: 818 YLNAMNGSTTGMDRSQLGPIVHAKCRSESSVAPSEGFGQNEGGATEEGSQRKRLR 872
>ref|XP_024024696.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Morus
notabilis]
Length = 877
Score = 77.4 bits (189), Expect = 1e-13
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
Y+N++ GS GMDRS LGPIVHAKCRSES+V SE +NE G EEGSQ KR+R
Sbjct: 822 YLNAMNGSTTGMDRSQLGPIVHAKCRSESSVAPSEGFGQNEGGATEEGSQRKRLR 876
>ref|XP_017236138.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Daucus carota subsp. sativus]
Length = 922
Score = 77.4 bits (189), Expect = 1e-13
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
YMN+ GS AGMDRS LGPIVH KC+S+SNV ++ED KNE Y E+G +MKR+R
Sbjct: 867 YMNAPAGSTAGMDRSQLGPIVHTKCKSDSNVTTAEDSRKNEMVYTEDGGRMKRLR 921
>ref|XP_017236137.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Daucus carota subsp. sativus]
gb|KZN07292.1| hypothetical protein DCAR_008129 [Daucus carota subsp. sativus]
Length = 986
Score = 77.4 bits (189), Expect = 1e-13
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMR 166
YMN+ GS AGMDRS LGPIVH KC+S+SNV ++ED KNE Y E+G +MKR+R
Sbjct: 931 YMNAPAGSTAGMDRSQLGPIVHTKCKSDSNVTTAEDSRKNEMVYTEDGGRMKRLR 985
>ref|XP_006383938.1| hypothetical protein POPTR_0004s01970g [Populus trichocarpa]
Length = 852
Score = 77.0 bits (188), Expect = 1e-13
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 2 YMNSLTGSAAGMDRSHLGPIVHAKCRSESNVVSSEDLSKNETGYIEEGSQMKRMRT 169
Y+NS GS AGMDRS LGPIVHAKCRS+S+VV ED +E G EEG+Q KRMR+
Sbjct: 797 YLNSSNGSTAGMDRSQLGPIVHAKCRSDSSVVPPEDFGHDEGGNSEEGNQRKRMRS 852