BLASTX nr result
ID: Acanthopanax21_contig00003036
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00003036
(770 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ARJ61676.1| RNA polymerase beta' subunit (plastid) [Eleuthero... 319 e-142
gb|ANS71847.1| RpoC1 (chloroplast) [Eleutherococcus gracilistylus] 318 e-142
ref|YP_004935543.1| RNA polymerase beta' subunit (chloroplast) [... 317 e-142
ref|YP_009161670.1| RNA polymerase beta (chloroplast) [Fatsia ja... 317 e-142
ref|YP_009122716.1| RNA polymerase beta' subunit (chloroplast) [... 317 e-142
gb|ANS71760.1| RpoC1 (chloroplast) [Eleutherococcus sessiliflorus] 316 e-141
ref|YP_009241043.1| RNA polymerase beta' subunit (chloroplast) [... 317 e-141
ref|YP_008814934.1| RNA polymerase beta (chloroplast) [Brassaiop... 315 e-141
gb|AKZ29737.1| RNA polymerase beta (chloroplast) [Panax quinquef... 312 e-140
ref|YP_086957.1| RNA polymerase beta' subunit [Panax ginseng] >g... 312 e-140
sp|Q68S15.2|RPOC1_PANGI RecName: Full=DNA-directed RNA polymeras... 312 e-140
ref|YP_009121164.1| RNA polymerase beta (chloroplast) [Panax not... 310 e-139
ref|YP_009266509.1| RpoC1 (chloroplast) [Panax stipuleanatus] >g... 310 e-139
gb|AMR97440.1| RpoC1 (chloroplast) [Panax vietnamensis] 309 e-139
ref|YP_009191931.1| RNA polymerase beta' subunit (chloroplast) [... 309 e-139
ref|YP_009191844.1| RNA polymerase beta' subunit (chloroplast) [... 309 e-139
ref|YP_009330682.1| RNA polymerase beta (chloroplast) [Viburnum ... 308 e-136
gb|AII17877.1| RNA polymerase beta subunit, partial (chloroplast... 310 e-136
gb|AII17883.1| RNA polymerase beta subunit, partial (chloroplast... 310 e-135
gb|AII17896.1| RNA polymerase beta subunit, partial (chloroplast... 309 e-135
>gb|ARJ61676.1| RNA polymerase beta' subunit (plastid) [Eleutherococcus senticosus]
Length = 689
Score = 319 bits (818), Expect(2) = e-142
Identities = 154/154 (100%), Positives = 154/154 (100%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 216 bits (551), Expect(2) = e-142
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>gb|ANS71847.1| RpoC1 (chloroplast) [Eleutherococcus gracilistylus]
Length = 689
Score = 318 bits (815), Expect(2) = e-142
Identities = 153/154 (99%), Positives = 154/154 (100%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVM+GHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN
Sbjct: 435 SKIREKEPIVWEILQEVMEGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 216 bits (551), Expect(2) = e-142
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>ref|YP_004935543.1| RNA polymerase beta' subunit (chloroplast) [Eleutherococcus
senticosus]
gb|AEO92609.1| RNA polymerase beta' subunit (chloroplast) [Eleutherococcus
senticosus]
Length = 689
Score = 317 bits (813), Expect(2) = e-142
Identities = 153/154 (99%), Positives = 153/154 (99%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPT DMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTHDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 216 bits (551), Expect(2) = e-142
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>ref|YP_009161670.1| RNA polymerase beta (chloroplast) [Fatsia japonica]
gb|AKS10944.1| RNA polymerase beta (chloroplast) [Fatsia japonica]
Length = 689
Score = 317 bits (812), Expect(2) = e-142
Identities = 153/154 (99%), Positives = 153/154 (99%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 216 bits (551), Expect(2) = e-142
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>ref|YP_009122716.1| RNA polymerase beta' subunit (chloroplast) [Dendropanax dentiger]
ref|YP_009159529.1| RpoC1 (chloroplast) [Dendropanax morbifer]
gb|AJK29847.1| RNA polymerase beta' subunit (chloroplast) [Dendropanax dentiger]
gb|AKQ20719.1| RpoC1 (chloroplast) [Dendropanax morbifer]
Length = 689
Score = 317 bits (812), Expect(2) = e-142
Identities = 153/154 (99%), Positives = 153/154 (99%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 216 bits (551), Expect(2) = e-142
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>gb|ANS71760.1| RpoC1 (chloroplast) [Eleutherococcus sessiliflorus]
Length = 689
Score = 316 bits (809), Expect(2) = e-141
Identities = 152/154 (98%), Positives = 153/154 (99%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNY+YTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYRYTKKKEP 588
Score = 216 bits (551), Expect(2) = e-141
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>ref|YP_009241043.1| RNA polymerase beta' subunit (chloroplast) [Schefflera heptaphylla]
gb|AMK46168.1| RNA polymerase beta' subunit (chloroplast) [Schefflera heptaphylla]
Length = 690
Score = 317 bits (812), Expect(2) = e-141
Identities = 153/154 (99%), Positives = 153/154 (99%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN
Sbjct: 436 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 495
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 496 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 555
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 556 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 589
Score = 214 bits (546), Expect(2) = e-141
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 585 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 644
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAI GFCQACSYGP
Sbjct: 645 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIHGFCQACSYGP 690
>ref|YP_008814934.1| RNA polymerase beta (chloroplast) [Brassaiopsis hainla]
gb|AGG39034.1| RNA polymerase beta (chloroplast) [Brassaiopsis hainla]
Length = 689
Score = 315 bits (807), Expect(2) = e-141
Identities = 152/154 (98%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAF PVLVEGRAICLHPLVCKGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFHPVLVEGRAICLHPLVCKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 215 bits (547), Expect(2) = e-141
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHIS YREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISFYREIEEAIQGFCQACSYGP 689
>gb|AKZ29737.1| RNA polymerase beta (chloroplast) [Panax quinquefolius]
Length = 692
Score = 312 bits (800), Expect(2) = e-140
Identities = 152/154 (98%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 438 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 497
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 498 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 557
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 558 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 591
Score = 216 bits (551), Expect(2) = e-140
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 587 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 646
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 647 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 692
>ref|YP_086957.1| RNA polymerase beta' subunit [Panax ginseng]
ref|YP_009155419.1| RpoC1 (chloroplast) [Panax quinquefolius]
gb|AAT98500.1| RNA polymerase beta I subunit (chloroplast) [Panax ginseng]
gb|AGM15016.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AGM15102.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AGM15188.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AGW31948.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AIX97880.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX97967.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98050.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98135.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98220.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98305.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98390.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98560.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AJC99479.1| RpoC1 (chloroplast) [Panax quinquefolius]
gb|AJC99564.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AJC99649.1| RpoC1 (chloroplast) [Panax ginseng]
Length = 689
Score = 312 bits (800), Expect(2) = e-140
Identities = 152/154 (98%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 216 bits (551), Expect(2) = e-140
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>sp|Q68S15.2|RPOC1_PANGI RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gb|AIX98475.1| RpoC1 (chloroplast) [Panax ginseng]
Length = 682
Score = 312 bits (800), Expect(2) = e-140
Identities = 152/154 (98%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 428 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 487
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 488 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 547
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 548 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 581
Score = 216 bits (551), Expect(2) = e-140
Identities = 104/106 (98%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY
Sbjct: 577 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 636
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 637 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 682
>ref|YP_009121164.1| RNA polymerase beta (chloroplast) [Panax notoginseng]
gb|AIA24318.1| RNA polymerase beta (chloroplast) [Panax notoginseng]
gb|AKB99063.1| RNA polymerase beta' subunit (chloroplast) [Panax notoginseng]
gb|AKG26591.1| RNA polymerase beta' subunit (chloroplast) [Panax notoginseng]
gb|AKU70766.1| RNA polymerase beta (chloroplast) [Panax notoginseng]
Length = 689
Score = 310 bits (795), Expect(2) = e-139
Identities = 151/154 (98%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSG+R
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGSR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 588
Score = 215 bits (547), Expect(2) = e-139
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKE PLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEVPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>ref|YP_009266509.1| RpoC1 (chloroplast) [Panax stipuleanatus]
gb|ANK78321.1| RpoC1 (chloroplast) [Panax japonicus var. bipinnatifidus]
gb|ANK78407.1| RpoC1 (chloroplast) [Panax stipuleanatus]
gb|ATI20852.1| RpoC1 (chloroplast) [Panax stipuleanatus]
gb|ATJ26028.1| RpoC1 (chloroplast) [Panax japonicus var. bipinnatifidus]
gb|ATJ26200.1| RpoC1 (chloroplast) [Panax stipuleanatus]
Length = 692
Score = 310 bits (793), Expect(2) = e-139
Identities = 151/154 (98%), Positives = 151/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 438 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 497
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 498 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 557
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNR NYQNERIYDNNYKYTKKKEP
Sbjct: 558 RGICVNRYNPCNRGNYQNERIYDNNYKYTKKKEP 591
Score = 215 bits (548), Expect(2) = e-139
Identities = 103/106 (97%), Positives = 104/106 (98%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVI+AKEAPLEVHYESLGTYYEIY
Sbjct: 587 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVIAAKEAPLEVHYESLGTYYEIY 646
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 647 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 692
>gb|AMR97440.1| RpoC1 (chloroplast) [Panax vietnamensis]
Length = 692
Score = 309 bits (791), Expect(2) = e-139
Identities = 151/154 (98%), Positives = 151/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 438 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 497
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 498 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 557
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRN QNERIYDNNYKYTKKKEP
Sbjct: 558 RGICVNRYNPCNRRNCQNERIYDNNYKYTKKKEP 591
Score = 215 bits (547), Expect(2) = e-139
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKE PLEVHYESLGTYYEIY
Sbjct: 587 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEVPLEVHYESLGTYYEIY 646
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 647 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 692
>ref|YP_009191931.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
gb|AKB99237.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
gb|AKB99324.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
gb|ATJ26118.1| RNA polymerase beta' subunit (chloroplast) [Panax sp. VM-2017]
gb|ATJ26285.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
Length = 689
Score = 309 bits (791), Expect(2) = e-139
Identities = 151/154 (98%), Positives = 151/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRN QNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNCQNERIYDNNYKYTKKKEP 588
Score = 215 bits (547), Expect(2) = e-139
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKE PLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEVPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>ref|YP_009191844.1| RNA polymerase beta' subunit (chloroplast) [Panax japonicus]
gb|AKB99150.1| RNA polymerase beta' subunit (chloroplast) [Panax japonicus]
Length = 689
Score = 309 bits (791), Expect(2) = e-139
Identities = 151/154 (98%), Positives = 151/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RGICVNRYNPCNRRN QNERIYDNNYKYTKKKEP
Sbjct: 555 RGICVNRYNPCNRRNCQNERIYDNNYKYTKKKEP 588
Score = 214 bits (544), Expect(2) = e-139
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
KKK FFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKE PLEVHYESLGTYYEIY
Sbjct: 584 KKKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEVPLEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEA+QGFCQACSYGP
Sbjct: 644 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAMQGFCQACSYGP 689
>ref|YP_009330682.1| RNA polymerase beta (chloroplast) [Viburnum utile]
gb|APD79284.1| RNA polymerase beta (chloroplast) [Viburnum utile]
Length = 689
Score = 308 bits (788), Expect(2) = e-136
Identities = 149/154 (96%), Positives = 151/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 435 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 494
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 495 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 554
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RG+CVNRYNPCNR NYQNERIYDNNYKYTK+KEP
Sbjct: 555 RGVCVNRYNPCNRGNYQNERIYDNNYKYTKEKEP 588
Score = 205 bits (521), Expect(2) = e-136
Identities = 97/106 (91%), Positives = 102/106 (96%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
K+K FF NSYDAIGAYRQKRINLDSPLWLRWRLDQRVI+A+EAP+EVHYESLGTYYEIY
Sbjct: 584 KEKEPFFSNSYDAIGAYRQKRINLDSPLWLRWRLDQRVIAAREAPIEVHYESLGTYYEIY 643
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 768
G YL+VRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP
Sbjct: 644 GHYLMVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYGP 689
>gb|AII17877.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
acerifolium]
gb|AII17882.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
cylindricum]
gb|AII17884.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
dilatatum]
gb|AII17887.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
lantanoides]
gb|AII17891.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
opulus]
Length = 540
Score = 310 bits (795), Expect(2) = e-136
Identities = 150/154 (97%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 287 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 346
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 347 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 406
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RG+CVNRYNPCNRRNYQNERIYDNNYKYTK+KEP
Sbjct: 407 RGVCVNRYNPCNRRNYQNERIYDNNYKYTKEKEP 440
Score = 202 bits (514), Expect(2) = e-136
Identities = 96/105 (91%), Positives = 101/105 (96%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
K+K FF NSYDAIGAYRQKRINLDSPLWLRWRLDQRVI+A+EAP+EVHYESLGTYYEIY
Sbjct: 436 KEKEPFFSNSYDAIGAYRQKRINLDSPLWLRWRLDQRVIAAREAPIEVHYESLGTYYEIY 495
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYG 765
G YL+VRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYG
Sbjct: 496 GHYLMVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYG 540
>gb|AII17883.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
dentatum]
gb|AII17890.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum molle]
gb|AII17897.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
triphyllum]
Length = 540
Score = 310 bits (795), Expect(2) = e-135
Identities = 150/154 (97%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 287 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 346
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNR
Sbjct: 347 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 406
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RG+CVNRYNPCNRRNYQNERIYDNNYKYTK+KEP
Sbjct: 407 RGVCVNRYNPCNRRNYQNERIYDNNYKYTKEKEP 440
Score = 202 bits (513), Expect(2) = e-135
Identities = 95/105 (90%), Positives = 101/105 (96%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
K+K FF NSYDAIGAYRQKRINLDSPLWLRWRLDQRVI+A+EAP+EVHYESLGTYYEIY
Sbjct: 436 KEKEPFFSNSYDAIGAYRQKRINLDSPLWLRWRLDQRVIAAREAPIEVHYESLGTYYEIY 495
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYG 765
G YL+VRSIKKEILYIYIRTTVGHISLYREIEEA+QGFCQACSYG
Sbjct: 496 GHYLMVRSIKKEILYIYIRTTVGHISLYREIEEAVQGFCQACSYG 540
>gb|AII17896.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum tinus]
Length = 540
Score = 309 bits (791), Expect(2) = e-135
Identities = 148/154 (96%), Positives = 152/154 (98%)
Frame = +3
Query: 3 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFN 182
SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLV KGFN
Sbjct: 287 SKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFN 346
Query: 183 ADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNR 362
ADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPIS+PTQDMLIGLYVLTSGNR
Sbjct: 347 ADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPTQDMLIGLYVLTSGNR 406
Query: 363 RGICVNRYNPCNRRNYQNERIYDNNYKYTKKKEP 464
RG+CVNRYNPCNRRNYQNER+YDNNYKYTK+KEP
Sbjct: 407 RGVCVNRYNPCNRRNYQNERMYDNNYKYTKEKEP 440
Score = 203 bits (517), Expect(2) = e-135
Identities = 97/105 (92%), Positives = 101/105 (96%)
Frame = +1
Query: 451 KKKNLFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQRVISAKEAPLEVHYESLGTYYEIY 630
K+K FF NSYDAIGAYRQKRINLDSPLWLRWRLDQRVI+AKEAP+EVHYESLGTYYEIY
Sbjct: 436 KEKEPFFSNSYDAIGAYRQKRINLDSPLWLRWRLDQRVIAAKEAPIEVHYESLGTYYEIY 495
Query: 631 GQYLIVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYG 765
G YL+VRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYG
Sbjct: 496 GHYLMVRSIKKEILYIYIRTTVGHISLYREIEEAIQGFCQACSYG 540