BLASTX nr result

ID: Acanthopanax21_contig00001837 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00001837
         (707 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017240458.1| PREDICTED: uncharacterized protein LOC108213...    70   2e-11

>ref|XP_017240458.1| PREDICTED: uncharacterized protein LOC108213198 [Daucus carota
           subsp. sativus]
 gb|KZN00943.1| hypothetical protein DCAR_009697 [Daucus carota subsp. sativus]
          Length = 143

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
 Frame = -3

Query: 522 KFLSEFKSCYGGGLIV-AAAEDTADKLPQQQPPV-MAINHAVPASRTTAATNRG----RL 361
           KF SE K CYGGG    + AEDT   LPQ +  V ++I +A          + G    RL
Sbjct: 3   KFFSELKLCYGGGSNTDSTAEDTTMTLPQPEKVVPLSIYYATGKKEIDTYASSGKISRRL 62

Query: 360 KKVQSSSAGNWKPVLSVIAENSVVVSDV----SKQMSIRXXXXXXXXXXXSTVRXXXXXX 193
           KK+ S  A NWKPVLS I EN+V+VSDV    +++ +              +        
Sbjct: 63  KKLHS--AANWKPVLSDILENNVIVSDVAFPRTRKQTTVVRSEVKASGKRKSAGSSASFY 120

Query: 192 XXXXXXSIHPMALPAFSPTPFLF 124
                 S  P +LPAFSPTP++F
Sbjct: 121 SDKYRKSTDPASLPAFSPTPYVF 143


Top