BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00001781
         (1952 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017223888.1| PREDICTED: rubisco accumulation factor 2, ch...   541   0.0  
ref|XP_017227749.1| PREDICTED: rubisco accumulation factor 1, ch...   521   e-178
ref|XP_007205174.1| rubisco accumulation factor 1.1, chloroplast...   505   e-171
ref|XP_012089314.1| rubisco accumulation factor 1.1, chloroplast...   501   e-169
ref|XP_021677217.1| rubisco accumulation factor 1.1, chloroplast...   499   e-169
gb|PON73478.1| Rubisco accumulation factor [Trema orientalis]         499   e-169
ref|XP_008370732.1| PREDICTED: rubisco accumulation factor 1, ch...   498   e-168
ref|XP_009372171.1| PREDICTED: rubisco accumulation factor 1, ch...   496   e-168
ref|XP_008218310.1| PREDICTED: rubisco accumulation factor 1, ch...   496   e-168
ref|XP_011465980.1| PREDICTED: LOW QUALITY PROTEIN: rubisco accu...   496   e-168
ref|XP_021624035.1| rubisco accumulation factor 1.1, chloroplast...   496   e-167
ref|XP_021811068.1| rubisco accumulation factor 1.1, chloroplast...   495   e-167
ref|XP_015875531.1| PREDICTED: rubisco accumulation factor 1, ch...   493   e-166
ref|XP_002521962.1| PREDICTED: rubisco accumulation factor 1, ch...   493   e-166
ref|XP_009364456.1| PREDICTED: rubisco accumulation factor 1, ch...   491   e-166
ref|XP_018824157.1| PREDICTED: rubisco accumulation factor 1, ch...   491   e-166
ref|XP_008350639.1| PREDICTED: rubisco accumulation factor 1, ch...   490   e-165
ref|XP_024189316.1| rubisco accumulation factor 1.1, chloroplast...   488   e-164
ref|XP_021677972.1| rubisco accumulation factor 1.1, chloroplast...   488   e-164
ref|XP_021888657.1| rubisco accumulation factor 1.1, chloroplast...   487   e-164

>ref|XP_017223888.1| PREDICTED: rubisco accumulation factor 2, chloroplastic-like [Daucus
            carota subsp. sativus]
 gb|KZM83404.1| hypothetical protein DCAR_030973 [Daucus carota subsp. sativus]
          Length = 431

 Score =  541 bits (1394), Expect = 0.0
 Identities = 288/438 (65%), Positives = 335/438 (76%), Gaps = 2/438 (0%)
 Frame = -3

Query: 1812 SVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQQKSHC-SRPISATIIPSKPNEPLQQLYXX 1636
            S ++NTL  STPFL           +P  P  KS C S PI +T  P+ P  P +Q+Y  
Sbjct: 3    SPSLNTLKFSTPFLP-----PPPPLTPLHPLHKSQCKSTPILSTFTPNPP--PQKQVYQP 55

Query: 1635 XXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGV 1456
                         SLDA  RLDIL+NRLGLW+DYAPLIPSLTQEGF APTIEEITG++GV
Sbjct: 56   FRPPPAPIPPQFRSLDAPARLDILSNRLGLWFDYAPLIPSLTQEGFSAPTIEEITGLTGV 115

Query: 1455 EQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFD 1276
            EQN+L+V AQVRDSLVQ+E++ E+L ++DLGG  LLYEIRLLSV QR AAARLI  E FD
Sbjct: 116  EQNQLIVGAQVRDSLVQAEVEDEVLRFYDLGGAQLLYEIRLLSVEQRAAAARLIARENFD 175

Query: 1275 AKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRDLELRNVGLEKAL 1096
             KGAQE+ARAIKDFPRR++E+GWE F+Y  PRDCL+F+YYRLALEH   E+R  GL KAL
Sbjct: 176  VKGAQEVARAIKDFPRRKREKGWECFEYRSPRDCLAFLYYRLALEHESFEVRKGGLVKAL 235

Query: 1095 AMAGSDRAVSKVLEELERKVGDVVGKE-NVAARVPVVRMKVGEVSEATTVTVLPVCRSEE 919
             MA S+RA  ++LE+LERK G   G++  VA +VPVVRMKVGEVSEAT+V VLPVCRSE 
Sbjct: 236  EMAESERAKKRILEDLERKGGGEKGEDVVVAVKVPVVRMKVGEVSEATSVAVLPVCRSEM 295

Query: 918  REKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALPWQ 739
            RE+EV++APWECGT GEFGVV AEK WSRWVVLPGWEPVVGLK+GGVVV F DARALPW+
Sbjct: 296  REEEVVDAPWECGTGGEFGVVVAEKPWSRWVVLPGWEPVVGLKKGGVVVGFPDARALPWK 355

Query: 738  VNRWYKEEAILVVXXXXXXXXXXXDEFYLVSKGDFGLKVERGSALKELGVEESLGTVVLV 559
            VN+WYKEE+ILVV           D FYLV K + GLKVERGSALK  G+EESLGTVVLV
Sbjct: 356  VNKWYKEESILVVADRKAKEVVTDDAFYLVCK-ENGLKVERGSALKGSGIEESLGTVVLV 414

Query: 558  VRPPREESEIQLAEEDWE 505
            VRPP+E++E QL EEDWE
Sbjct: 415  VRPPKEDTENQL-EEDWE 431


>ref|XP_017227749.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Daucus
            carota subsp. sativus]
 gb|KZN09522.1| hypothetical protein DCAR_002178 [Daucus carota subsp. sativus]
          Length = 392

 Score =  521 bits (1342), Expect = e-178
 Identities = 264/365 (72%), Positives = 305/365 (83%), Gaps = 2/365 (0%)
 Frame = -3

Query: 1593 LDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGVEQNRLVVAAQVRDS 1414
            LDANGRL+ILANRLGLW++YAPLIPSLTQEG  AP IEE+TG++GVEQN+L+V  QVRDS
Sbjct: 30   LDANGRLEILANRLGLWFEYAPLIPSLTQEGIAAPAIEEVTGLTGVEQNQLIVGCQVRDS 89

Query: 1413 LVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFDAKGAQELARAIKDF 1234
            LVQS+++ E+LG+FDLGG  LLYEIRLLSV QR  AARLI  EKFD KGAQELARAIKD+
Sbjct: 90   LVQSKLEDEVLGFFDLGGAQLLYEIRLLSVAQRAEAARLIAREKFDVKGAQELARAIKDY 149

Query: 1233 PRRRKERGWESFDYTVPRDCLSFMYYRLALEHRDLELRNVGLEKALAMAGSDRAVSKVLE 1054
            PRR+KE+GWE F+Y+ PRD L+FMYYRLALEH+ +E R  GLEKAL MA +++A  +VL 
Sbjct: 150  PRRKKEKGWECFEYSSPRDMLAFMYYRLALEHQGVEAREAGLEKALEMAETEKARERVLR 209

Query: 1053 ELERKVGDVVGKENV--AARVPVVRMKVGEVSEATTVTVLPVCRSEEREKEVMEAPWECG 880
            +L    GD  G+E+   A +VPVVRMKVGEVSEAT+V VLPVCR+EEREKEV++APWECG
Sbjct: 210  DLRGMSGDGGGEESAVKAVKVPVVRMKVGEVSEATSVAVLPVCRAEEREKEVVDAPWECG 269

Query: 879  TEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALPWQVNRWYKEEAILVV 700
            T GEFGVV AEKAWSRWVVLPGWEPVVGLK+GGVVV F+DARALPW+VN+WYKEE+ILVV
Sbjct: 270  TAGEFGVVVAEKAWSRWVVLPGWEPVVGLKKGGVVVGFSDARALPWKVNKWYKEESILVV 329

Query: 699  XXXXXXXXXXXDEFYLVSKGDFGLKVERGSALKELGVEESLGTVVLVVRPPREESEIQLA 520
                       D FYLV + D GLKVERGSALKE GV ESLG VVLVVRPPRE++E QL 
Sbjct: 330  ADRKVKEVTMDDGFYLVCRDD-GLKVERGSALKESGVVESLGAVVLVVRPPREDTENQL- 387

Query: 519  EEDWE 505
            EEDWE
Sbjct: 388  EEDWE 392


>ref|XP_007205174.1| rubisco accumulation factor 1.1, chloroplastic [Prunus persica]
 gb|ONI04923.1| hypothetical protein PRUPE_6G348600 [Prunus persica]
          Length = 454

 Score =  505 bits (1300), Expect = e-171
 Identities = 266/442 (60%), Positives = 319/442 (72%), Gaps = 6/442 (1%)
 Frame = -3

Query: 1812 SVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEPLQQLYXXX 1633
            + N N L  ST FL  H         P     K    +PISAT+ PS  ++  QQ+Y   
Sbjct: 22   NTNTNLLLFSTSFLNPH--------PPPLLYPKPSSLKPISATLTPSSSSQQ-QQVYQPF 72

Query: 1632 XXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGVE 1453
                        SLDANGRL+ILANRLGLWY++APLIPSL QEGF  PTIEE+TGISGVE
Sbjct: 73   RPPPSPVPAKFRSLDANGRLEILANRLGLWYEFAPLIPSLLQEGFTPPTIEEVTGISGVE 132

Query: 1452 QNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFDA 1273
            QNRLVVAAQVRDSLVQS+ DP+IL  FD GG  LLYEIRLLSV QR AAAR I+E K DA
Sbjct: 133  QNRLVVAAQVRDSLVQSKTDPKILAEFDTGGSELLYEIRLLSVQQRAAAARYIIENKLDA 192

Query: 1272 KGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNVGLEKAL 1096
            KG Q+LAR++KDFPRRR ++GWESFDY  P DCL F+YYR A EH++  E R   LE+AL
Sbjct: 193  KGTQDLARSMKDFPRRRGDKGWESFDYAHPGDCLGFIYYRQAREHKNPSEPRTAALEQAL 252

Query: 1095 AMAGSDRAVSKVLEELERKVGDVVGKEN---VAARVPVVRMKVGEVSEATTVTVLPVCRS 925
             +AG+D+A   +L +LE +  +  G+E       RVPVVR+K GEV+E++ V +LPVCR+
Sbjct: 253  KVAGTDKAKKIILTDLEGETDEKEGREGDVIDVVRVPVVRLKFGEVAESSKVVILPVCRA 312

Query: 924  EEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALP 745
            +E++KEV+EAPWEC +EGEFGVV AEK W RWVVLPGWEPVVGL +GGVVV+F+DAR LP
Sbjct: 313  DEKDKEVLEAPWECSSEGEFGVVVAEKGWKRWVVLPGWEPVVGLGKGGVVVSFSDARVLP 372

Query: 744  WQVNRWYKEEAILVVXXXXXXXXXXXDEFYL--VSKGDFGLKVERGSALKELGVEESLGT 571
            W+VNRWYKEE IL+V           D FYL  V  G  G KV RGSALKE GV+ESLGT
Sbjct: 373  WKVNRWYKEEPILLVADRSKKEVTADDGFYLAAVEGGGLGFKVVRGSALKETGVKESLGT 432

Query: 570  VVLVVRPPREESEIQLAEEDWE 505
            VV++VRPPR+E++ QL+EEDWE
Sbjct: 433  VVMIVRPPRDETDDQLSEEDWE 454


>ref|XP_012089314.1| rubisco accumulation factor 1.1, chloroplastic [Jatropha curcas]
 gb|KDP23700.1| hypothetical protein JCGZ_23533 [Jatropha curcas]
          Length = 452

 Score =  501 bits (1289), Expect = e-169
 Identities = 274/453 (60%), Positives = 324/453 (71%), Gaps = 15/453 (3%)
 Frame = -3

Query: 1818 VLSVNVNTLSLSTPFLTNHHHHQSIAFSPQ-------FPQQKSHCSRPISATIIPSKPNE 1660
            + S NVNT    + + + +    S   SP         P  K H  +PISAT+IPS P  
Sbjct: 1    MFSANVNTHVPLSLYNSKNKSFSSSFLSPNPPLFIFHLPSPKIHL-KPISATLIPSSPPP 59

Query: 1659 PL-QQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTI 1483
            P  QQLY               SLDA GRL+ILANRLGLWY+YAPLI SL +EGF   +I
Sbjct: 60   PASQQLYQPFRPPPNTLPPQYQSLDAAGRLEILANRLGLWYEYAPLITSLIREGFSPTSI 119

Query: 1482 EEITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAA 1303
            EE TGISGVEQNRLVVAAQVR+SL+QS+ DPEI+  FD GG  LLYEIRLLSV+QR AAA
Sbjct: 120  EESTGISGVEQNRLVVAAQVRESLIQSKTDPEIVAEFDTGGAELLYEIRLLSVSQRAAAA 179

Query: 1302 RLIVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRDL-E 1126
            R +++ K DAKGAQ+LARA+KDFPRRR ++ WE FDYT+P DCLSFMYYR + EH+DL E
Sbjct: 180  RFLIQHKLDAKGAQDLARAMKDFPRRRGDKAWEDFDYTLPGDCLSFMYYRQSREHKDLSE 239

Query: 1125 LRNVGLEKALAMAGSDRAVSKVLEELERKVGDVVGKENVAA---RVPVVRMKVGEVSEAT 955
             R   LE AL +A S++A + +L+EL+    D  G+E   A   RVPVVR+K+GEV+EA+
Sbjct: 240  QRTNALEMALDVAESEKAKNSILKELQGDSEDKDGEEGEMADSVRVPVVRLKLGEVAEAS 299

Query: 954  TVTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVV 775
             V VLPVCR+E+ EKE++EAPWEC TEGEFGVV AEK W RWVVLP WEPVVGL +GGVV
Sbjct: 300  NVVVLPVCRAEQIEKEILEAPWECRTEGEFGVVVAEKGWERWVVLPAWEPVVGLGKGGVV 359

Query: 774  VAFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVS---KGDFGLKVERGSAL 604
            VAF DAR LPW+VNRWYKEEA+LVV           D FYLV+    GD GLKVERGSAL
Sbjct: 360  VAFPDARVLPWKVNRWYKEEAVLVVADRGRKEVTIDDGFYLVAVDGSGDGGLKVERGSAL 419

Query: 603  KELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
            K  GVE SLGTVV VVRPP+EE++ QL +EDWE
Sbjct: 420  KAKGVEVSLGTVVTVVRPPKEETDDQLRDEDWE 452


>ref|XP_021677217.1| rubisco accumulation factor 1.1, chloroplastic-like [Hevea
            brasiliensis]
          Length = 452

 Score =  499 bits (1286), Expect = e-169
 Identities = 278/455 (61%), Positives = 328/455 (72%), Gaps = 17/455 (3%)
 Frame = -3

Query: 1818 VLSVNVNTLSLSTPFLTNHHHHQSIAF-SPQFP----QQKSHCS--RPISATIIPSKPNE 1660
            + S  VNTL+  T  L+N +   S +F  P FP    Q  S  +  +PISA++IP+ P  
Sbjct: 1    MFSATVNTLT--TIALSNSNKPFSSSFLGPCFPLFIFQSPSPKAPLKPISASLIPASP-P 57

Query: 1659 PLQQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIE 1480
            P QQLY               SLD   RLDILANRLGLWY+YAPLIP L +EGF  P+IE
Sbjct: 58   PKQQLYQPFRPPPSPLPSQYRSLDTASRLDILANRLGLWYEYAPLIPCLIREGFTPPSIE 117

Query: 1479 EITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAAR 1300
            E TGISGVEQNRLVVAAQVR+SLVQS  DPEI+  FD GG  LLYEIRLLS TQR A+AR
Sbjct: 118  EATGISGVEQNRLVVAAQVRESLVQSNTDPEIVSAFDTGGAELLYEIRLLSATQRAASAR 177

Query: 1299 LIVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LEL 1123
             I+E K D KGAQ+LARA+KD+PRRR E+ WESFDYT+P DCLSFMYYR + EH+   EL
Sbjct: 178  FIIEHKLDVKGAQDLARAVKDYPRRRGEKAWESFDYTLPGDCLSFMYYRQSREHKSPSEL 237

Query: 1122 RNVGLEKALAMAGSDRAVSKVLEELERKVGDVVGKE---NVAARVPVVRMKVGEVSEATT 952
            R   LE AL +A S++A S VL EL+ +     GKE       RVPVVR+++GEV+EAT+
Sbjct: 238  RKNALEMALDVAESEKAKSAVLSELQGEGEGEDGKEEEMGEGIRVPVVRLRIGEVAEATS 297

Query: 951  VTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVV 772
            V VLPVC +EERE+E++EAPWECGTEGEFGVV AEK W RWVVLP WEPVVGL++GGVVV
Sbjct: 298  VVVLPVCMAEEREREILEAPWECGTEGEFGVVVAEKGWKRWVVLPRWEPVVGLEKGGVVV 357

Query: 771  AFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVSKGDFG------LKVERGS 610
            AFADARALPW+VNRWYKEEAILVV           D FYL++  D G      LKVERGS
Sbjct: 358  AFADARALPWKVNRWYKEEAILVVADRGRKEVNVDDGFYLMAVDDNGDGRSGALKVERGS 417

Query: 609  ALKELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
             LK+ GV ESL TV+LVVRPP+EE++ QL++EDWE
Sbjct: 418  ELKKRGVGESLATVLLVVRPPKEETDDQLSDEDWE 452


>gb|PON73478.1| Rubisco accumulation factor [Trema orientalis]
          Length = 454

 Score =  499 bits (1286), Expect = e-169
 Identities = 276/459 (60%), Positives = 329/459 (71%), Gaps = 21/459 (4%)
 Frame = -3

Query: 1818 VLSVNVNTLSLSTPFLTNHHHHQSIA----FSPQFPQQKSHCS--------RPISATIIP 1675
            +LS+  NTL   +PF    HH + ++     +PQ P  +   S        +PISAT  P
Sbjct: 1    MLSLTANTLRPLSPF----HHDKLLSSFTFLTPQAPHLQHPRSTLHSKPSLKPISATFTP 56

Query: 1674 SKPNEPLQQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFI 1495
            S PN   QQLY               SLD   RL++LANRLGLW++YAP+IPSL QEGF 
Sbjct: 57   S-PNPQQQQLYQPFRPPPSPLPSQFRSLDTASRLEVLANRLGLWFEYAPIIPSLIQEGFT 115

Query: 1494 APTIEEITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQR 1315
             P+IEE TGISGVEQNRLVVAAQVRDSL+QS+ DPEI+  FDLGG  LLYEIRLLS  QR
Sbjct: 116  PPSIEEATGISGVEQNRLVVAAQVRDSLLQSKTDPEIVAAFDLGGAELLYEIRLLSAQQR 175

Query: 1314 TAAARLIVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHR 1135
            +AAA  I    FDAKGAQ+LARA+KDFPRRR ++GWESF Y  P DCLSFMYYR + EH+
Sbjct: 176  SAAAGYIAANGFDAKGAQDLARAMKDFPRRRGDKGWESFAYARPGDCLSFMYYRQSREHK 235

Query: 1134 D-LELRNVGLEKALAMAGSDRAVSKVLEELERKVGD---VVGKENVAARVPVVRMKVGEV 967
            +  E R   LE+AL +A ++ A S+VL++L+ + GD     G+   A RVPVVR+K+GEV
Sbjct: 236  NPSEQRTAALEQALKVAETEGAKSRVLQDLKDREGDREGAKGEIGEAVRVPVVRLKIGEV 295

Query: 966  SEATTVTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKR 787
            +EA+TV VLPVCR+EEREKEV+EAP EC TEGEFGVV AEK W RWVVLPGWEPVVGL +
Sbjct: 296  AEASTVAVLPVCRAEEREKEVLEAPGECRTEGEFGVVVAEKGWKRWVVLPGWEPVVGLGK 355

Query: 786  GGVVVAFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVS-----KGDFGLKV 622
            GGVV++F+DARALPW+ NRWYKEEAILVV           D FYLV+      G  GLKV
Sbjct: 356  GGVVISFSDARALPWKTNRWYKEEAILVVADRERKEVAADDGFYLVAANGEGDGGDGLKV 415

Query: 621  ERGSALKELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
             RGSALKE GV+ESLGTVVLVVRPPREE++ QL++EDWE
Sbjct: 416  VRGSALKETGVKESLGTVVLVVRPPREETDNQLSDEDWE 454


>ref|XP_008370732.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus
            domestica]
          Length = 449

 Score =  498 bits (1282), Expect = e-168
 Identities = 270/443 (60%), Positives = 318/443 (71%), Gaps = 7/443 (1%)
 Frame = -3

Query: 1812 SVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEPLQ-QLYXX 1636
            S N  T  LS+    N H    +   P  P       +PISAT+ PS   +  Q Q+Y  
Sbjct: 14   SFNPTTTFLSSTSFLNPHPPLLLHHKPSSP-------KPISATLTPSSSTQQQQKQVYQP 66

Query: 1635 XXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGV 1456
                         SLDANGRL+ILANRLGLW++YAPLIPSLTQEGF  PTIEEITGISGV
Sbjct: 67   FRPPPSPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLTQEGFTPPTIEEITGISGV 126

Query: 1455 EQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFD 1276
            EQNRLVVAAQVRDSLVQS  DPEI+  FDLGG  LLYEIRLLSV QR AA+R I+E K D
Sbjct: 127  EQNRLVVAAQVRDSLVQSNTDPEIVSEFDLGGSELLYEIRLLSVQQRAAASRFIIENKLD 186

Query: 1275 AKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNVGLEKA 1099
             KGAQ+LAR++KDFPRRR E+GWESFDY  P DCL FMY+R   EH++  E R   LE+A
Sbjct: 187  GKGAQDLARSMKDFPRRRTEKGWESFDYASPGDCLGFMYFRQGREHKNPSEPRTAALEQA 246

Query: 1098 LAMAGSDRAVSKVLEELERKVGD-VVGKENVAA--RVPVVRMKVGEVSEATTVTVLPVCR 928
            L +A +D+A   +L+ELE +  D    +E+VAA  RVPVVR+K GEV+E+T V +LPVCR
Sbjct: 247  LKVAQTDKAKKVILKELEGESEDKEEEEEDVAAGVRVPVVRLKFGEVAESTKVVILPVCR 306

Query: 927  SEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARAL 748
            +EE++KEVMEAPWEC +EGE GV+ AEK W RWVVLPGWEPVV L +GGVVV+F+DAR L
Sbjct: 307  AEEKDKEVMEAPWECTSEGELGVMVAEKGWKRWVVLPGWEPVVSLGKGGVVVSFSDARVL 366

Query: 747  PWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVSKGDFGL--KVERGSALKELGVEESLG 574
            PW+ NRWYKEE ILVV           D FYL +    GL  KV RGSALKE GVEESLG
Sbjct: 367  PWKANRWYKEEPILVVADRSKREVEADDGFYLAAXDGEGLGFKVVRGSALKEAGVEESLG 426

Query: 573  TVVLVVRPPREESEIQLAEEDWE 505
            TVVL+VRPPR+E++ QL++EDWE
Sbjct: 427  TVVLIVRPPRDETDDQLSDEDWE 449


>ref|XP_009372171.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like, partial
            [Pyrus x bretschneideri]
          Length = 450

 Score =  496 bits (1278), Expect = e-168
 Identities = 271/442 (61%), Positives = 316/442 (71%), Gaps = 6/442 (1%)
 Frame = -3

Query: 1812 SVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEPLQQ-LYXX 1636
            + +  T   ST FL  H        SP  P+ K    +PISATIIPS  ++  QQ +Y  
Sbjct: 17   TTSTTTFLSSTSFLNPHP-------SP-LPRPKPSSPKPISATIIPSSSSQQQQQQVYQP 68

Query: 1635 XXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGV 1456
                         SLDANGRL+ILANRLGLW++YAPLIPSLTQEGF  PTIEEITGISGV
Sbjct: 69   FRPPPSPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLTQEGFTPPTIEEITGISGV 128

Query: 1455 EQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFD 1276
            EQNRLVVAAQVRDSLVQS  DPEI+  FDLGG  LLYEIRLLSV QR AAAR IVE K D
Sbjct: 129  EQNRLVVAAQVRDSLVQSNTDPEIVSEFDLGGSELLYEIRLLSVQQRAAAARFIVENKLD 188

Query: 1275 AKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNVGLEKA 1099
            A+GAQ+LAR++KDFPRRR E+GWESFDY    DCL FMY+R   EH++  E R   LE+A
Sbjct: 189  AEGAQDLARSMKDFPRRRTEKGWESFDYASAGDCLGFMYFRQGREHKNPSEPRTAALEQA 248

Query: 1098 LAMAGSDRAVSKVLEELERKVGDVVGKENVA--ARVPVVRMKVGEVSEATTVTVLPVCRS 925
            L +A +D+A   +L+ELE +  D   +E+VA   RVPVVR+K GEV+E+T V +LPVCR+
Sbjct: 249  LKVAQTDKAKKVILKELEGESEDKEKEEDVAVGVRVPVVRLKFGEVAESTKVVILPVCRA 308

Query: 924  EEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALP 745
            EE++KEVMEAPWEC  EGE GV+ AEK W RWVVLPGWEPVV L +GGVVV+F+DAR LP
Sbjct: 309  EEKDKEVMEAPWECTGEGELGVMVAEKGWKRWVVLPGWEPVVSLGKGGVVVSFSDARVLP 368

Query: 744  WQVNRWYKEEAILVVXXXXXXXXXXXDEFYL--VSKGDFGLKVERGSALKELGVEESLGT 571
            W+VNRWY+EE ILVV           D FYL  V     G KV RGSAL   GVEE LGT
Sbjct: 369  WKVNRWYQEEPILVVADRSKREVEADDGFYLAAVDGEGLGFKVVRGSALTAAGVEECLGT 428

Query: 570  VVLVVRPPREESEIQLAEEDWE 505
            VVL+VRPPR E++ QL+EEDWE
Sbjct: 429  VVLIVRPPRHETDDQLSEEDWE 450


>ref|XP_008218310.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Prunus mume]
          Length = 450

 Score =  496 bits (1278), Expect = e-168
 Identities = 264/442 (59%), Positives = 315/442 (71%), Gaps = 6/442 (1%)
 Frame = -3

Query: 1812 SVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEPLQQLYXXX 1633
            + N N L  ST FL            P     K    +PISAT+ PS   +  QQ+Y   
Sbjct: 18   NTNTNLLLFSTSFLNPR--------PPPLLYPKPSSLKPISATLTPSSSFQQ-QQVYQPF 68

Query: 1632 XXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGVE 1453
                        SLDANGR++IL+NRLGLWY++APLIPSL QEGF  PTIEE TGISGVE
Sbjct: 69   RPPPSPVPAKFRSLDANGRIEILSNRLGLWYEFAPLIPSLLQEGFTPPTIEEATGISGVE 128

Query: 1452 QNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFDA 1273
            QNRLVVAAQVRDSLVQS+ DP+IL  FD GG  LLYEIRLLSV QR AAAR I+E K DA
Sbjct: 129  QNRLVVAAQVRDSLVQSKTDPQILAEFDTGGSELLYEIRLLSVQQRAAAARYIIENKLDA 188

Query: 1272 KGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNVGLEKAL 1096
            KG Q+LAR++KDFPRRR E+GWESFDY  P DCL FMYYR A EH++  E R   LE+AL
Sbjct: 189  KGTQDLARSMKDFPRRRGEKGWESFDYAHPGDCLGFMYYRQAREHKNPSEPRTAALEQAL 248

Query: 1095 AMAGSDRAVSKVLEELERKVGDVVGKE---NVAARVPVVRMKVGEVSEATTVTVLPVCRS 925
             +AG+D+A   +L + E +  +  G+E     A RVPVVR+K GEV+E++ V +LPVCR+
Sbjct: 249  KVAGTDKAKKIILTDFEGETDEKEGREWDVIDAVRVPVVRLKFGEVAESSKVVILPVCRA 308

Query: 924  EEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALP 745
            EE++KEV+EAPWEC +EGEFGVV AEK W RWVVLPGWEPVVGL +G VVV+F+DAR LP
Sbjct: 309  EEKDKEVLEAPWECSSEGEFGVVVAEKGWKRWVVLPGWEPVVGLGKGAVVVSFSDARVLP 368

Query: 744  WQVNRWYKEEAILVVXXXXXXXXXXXDEFYL--VSKGDFGLKVERGSALKELGVEESLGT 571
            W+VN+WYKEE ILVV           D FYL  V  G  G KV RGSALKE GV+ESLGT
Sbjct: 369  WKVNKWYKEEPILVVADRSKKEVAADDGFYLAAVEGGGLGFKVVRGSALKETGVKESLGT 428

Query: 570  VVLVVRPPREESEIQLAEEDWE 505
            VV++VRPPR++++ QL+EEDWE
Sbjct: 429  VVMIVRPPRDDTDDQLSEEDWE 450


>ref|XP_011465980.1| PREDICTED: LOW QUALITY PROTEIN: rubisco accumulation factor 1,
            chloroplastic [Fragaria vesca subsp. vesca]
          Length = 442

 Score =  496 bits (1277), Expect = e-168
 Identities = 268/447 (59%), Positives = 319/447 (71%), Gaps = 6/447 (1%)
 Frame = -3

Query: 1827 TMAVLSVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATI--IPSKPNEPL 1654
            T + L    +  + +T FL  H   + +   P          +PISA+I  +PS P +P 
Sbjct: 5    TSSTLKPTFSPFTSTTTFLNPHQPPRLLHPKPSL--------KPISASIQHLPSHP-KPN 55

Query: 1653 QQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEI 1474
            QQ+Y               SLD NGRL+ILANRLGLWY+YAPLIPSL Q+GF  PTIEEI
Sbjct: 56   QQVYQPFRPPPSPIPEQYSSLDVNGRLEILANRLGLWYEYAPLIPSLLQQGFTPPTIEEI 115

Query: 1473 TGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLI 1294
            TGISGVEQNRLVVAAQVR+SL+ S+ DPEI+  FD GG  LLYEIRLLSV QR AAAR I
Sbjct: 116  TGISGVEQNRLVVAAQVRESLIHSKTDPEIMAEFDTGGSELLYEIRLLSVQQRAAAARFI 175

Query: 1293 VEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRDL-ELRN 1117
            VE+K DAKGA +LARA KDFPRRR ++GWESFDYT P DCL+FMYYR A EH D+ E R 
Sbjct: 176  VEKKLDAKGAGDLARATKDFPRRRGDKGWESFDYTNPGDCLAFMYYRQAREHNDMSETRT 235

Query: 1116 VGLEKALAMAGSDRAVSKVLEELE-RKVGDVVGKENVAARVPVVRMKVGEVSEATTVTVL 940
              LE+AL + GS++A S ++ ELE   V D   +     +VPVVR+K GEV E++ V VL
Sbjct: 236  DALEEALKVVGSEKARSVIVRELEGASVRDEEEEVVAVVKVPVVRLKFGEVGESSRVVVL 295

Query: 939  PVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFAD 760
            PVC++EE++KEVMEAPWEC +EGE GVV AEK W RWVVLPGWEPVVGL +GGVVV+F+D
Sbjct: 296  PVCKAEEKDKEVMEAPWECESEGELGVVVAEKGWKRWVVLPGWEPVVGLGKGGVVVSFSD 355

Query: 759  ARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYL--VSKGDFGLKVERGSALKELGVE 586
            AR LPW+VNRWYKEE ILVV           D FYL  V     G KVERGSALKE GV+
Sbjct: 356  ARVLPWKVNRWYKEEPILVVADRSKKEVEADDGFYLAAVDGEGLGFKVERGSALKEAGVK 415

Query: 585  ESLGTVVLVVRPPREESEIQLAEEDWE 505
            ESLGTVVL+VRPP++++E +LAEEDWE
Sbjct: 416  ESLGTVVLIVRPPKDDTENELAEEDWE 442


>ref|XP_021624035.1| rubisco accumulation factor 1.1, chloroplastic-like [Manihot
            esculenta]
 gb|OAY42043.1| hypothetical protein MANES_09G149100 [Manihot esculenta]
          Length = 453

 Score =  496 bits (1277), Expect = e-167
 Identities = 264/409 (64%), Positives = 303/409 (74%), Gaps = 10/409 (2%)
 Frame = -3

Query: 1701 RPISATIIPSKPNEPLQQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLI 1522
            +PISAT+IP+ P+   QQLY               SLD   RLDIL NRLGLWY+YA LI
Sbjct: 45   KPISATLIPASPSPSNQQLYQPFRPPPSPIPSQYGSLDTASRLDILTNRLGLWYEYALLI 104

Query: 1521 PSLTQEGFIAPTIEEITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYE 1342
            PSL QEGF  P+IEE TGI GVEQNRLVVAAQVR+SLVQS  DPEI+  FD GG  LLYE
Sbjct: 105  PSLIQEGFTPPSIEESTGIPGVEQNRLVVAAQVRESLVQSNTDPEIVSAFDTGGAELLYE 164

Query: 1341 IRLLSVTQRTAAARLIVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFM 1162
            IRLLS TQR AAAR IVE K DAKGAQ+LARA+KD+PRRR E+ WESFDY +P DCLSFM
Sbjct: 165  IRLLSATQRNAAARFIVEHKLDAKGAQDLARAMKDYPRRRGEKAWESFDYNLPGDCLSFM 224

Query: 1161 YYRLALEHRD-LELRNVGLEKALAMAGSDRAVSKVLEELERKVGDVVGKENV---AARVP 994
            YYR A EH +  ELR   LE A+ +A S++A S VL EL+R+      KE       RVP
Sbjct: 225  YYRQAREHNNPSELRTNTLEMAMDVAESEKAKSAVLGELKREGEGEDAKEEETGDGVRVP 284

Query: 993  VVRMKVGEVSEATTVTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPG 814
            VVR+++GEV+EAT V VLPVC++EERE+E++EAPWEC TEGEFGVVAAEK W RWVVLP 
Sbjct: 285  VVRLRIGEVAEATRVVVLPVCKAEEREREILEAPWECRTEGEFGVVAAEKGWKRWVVLPS 344

Query: 813  WEPVVGLKRGGVVVAFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVSKGDF 634
            WEP+VGL++GGVVVAFADARALPW+ NRWYKEEAILVV             FYL++  D 
Sbjct: 345  WEPLVGLEKGGVVVAFADARALPWKANRWYKEEAILVVADRGRKEVNVDSGFYLMAVADN 404

Query: 633  G------LKVERGSALKELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
            G      LKVERGS LKE GV ESLGTVVLVVRPP+EE++ QL +EDWE
Sbjct: 405  GDGRSGALKVERGSELKERGVGESLGTVVLVVRPPKEETDDQLNDEDWE 453


>ref|XP_021811068.1| rubisco accumulation factor 1.1, chloroplastic-like [Prunus avium]
          Length = 450

 Score =  495 bits (1275), Expect = e-167
 Identities = 261/442 (59%), Positives = 314/442 (71%), Gaps = 6/442 (1%)
 Frame = -3

Query: 1812 SVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEPLQQLYXXX 1633
            + N N L   T FL  H         P     K    +PISAT+ PS  ++  QQ+Y   
Sbjct: 18   NTNTNLLLFPTSFLNPH--------PPPLLYPKPSSLKPISATLTPSSSSQQ-QQVYQPF 68

Query: 1632 XXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGVE 1453
                        SLD NGRL+IL+NRLGLWY++APLIPSL QEGF  PTIEE+TGISG+E
Sbjct: 69   RPPPSTVPAKFRSLDTNGRLEILSNRLGLWYEFAPLIPSLLQEGFTPPTIEEVTGISGIE 128

Query: 1452 QNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFDA 1273
            QNRLVVAAQVRDSLVQS+ DP+IL  FD GG  LLYEIRLLS  QR AAA  I+E K DA
Sbjct: 129  QNRLVVAAQVRDSLVQSKTDPQILAEFDTGGSELLYEIRLLSAQQRAAAACYIIENKLDA 188

Query: 1272 KGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNVGLEKAL 1096
             G Q+LAR++KDFPRRR ++GWESFDY  P DCL FMYYR A EH++  E R   LE+AL
Sbjct: 189  LGTQDLARSMKDFPRRRGDKGWESFDYAHPGDCLGFMYYRQAREHKNPSEPRTAALEQAL 248

Query: 1095 AMAGSDRAVSKVLEELERKVGDVVGKEN---VAARVPVVRMKVGEVSEATTVTVLPVCRS 925
             +AG+D+A   +L +LE +  +  G+E    VA RVPVVR+K GEV+E++ V +LPVCR+
Sbjct: 249  KVAGTDKAKKIILTDLEGETDEKEGREGDVIVAVRVPVVRLKFGEVAESSKVVILPVCRA 308

Query: 924  EEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALP 745
            EE++KEV+EAPWEC  EGEFGVV A+K W RWVVLPGWEPVVGL +GGVVV+F+DAR LP
Sbjct: 309  EEKDKEVLEAPWECSGEGEFGVVVADKGWKRWVVLPGWEPVVGLGKGGVVVSFSDARVLP 368

Query: 744  WQVNRWYKEEAILVVXXXXXXXXXXXDEFYL--VSKGDFGLKVERGSALKELGVEESLGT 571
            W+VNRWYKEE ILVV           D  YL  V  G  G KV RGSALKE GV+ESLGT
Sbjct: 369  WKVNRWYKEEPILVVADRSKKEVAADDGIYLAAVEGGGLGFKVVRGSALKETGVKESLGT 428

Query: 570  VVLVVRPPREESEIQLAEEDWE 505
            VV++VRPPR++++ QL+EEDWE
Sbjct: 429  VVMIVRPPRDDTDDQLSEEDWE 450


>ref|XP_015875531.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like
            [Ziziphus jujuba]
          Length = 457

 Score =  493 bits (1270), Expect = e-166
 Identities = 267/458 (58%), Positives = 325/458 (70%), Gaps = 20/458 (4%)
 Frame = -3

Query: 1818 VLSVNVNTLSLSTPFLTNHHHHQSIAFSPQF------PQQKSHCS-----RPISATIIPS 1672
            +LS+  N++  S+ F++N++++ +  FS         P   SH       +PISAT+ PS
Sbjct: 1    MLSLTANSVKPSSSFISNNNNNNNKPFSSSSFLNAHRPLLISHSKPLPSPKPISATLNPS 60

Query: 1671 -----KPNEPLQQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQ 1507
                  P    Q LY               +LD   R+++LANRLGLW+DYAPLIP+L Q
Sbjct: 61   PTPSSSPQHQQQNLYQPFRPPPSPLPSQFRNLDTASRIEVLANRLGLWFDYAPLIPTLIQ 120

Query: 1506 EGFIAPTIEEITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLS 1327
            EGF  P IEE TGISGVEQN LVVAA+VRDSLVQS+IDPEI+  FDLGG  LLYEIRLL+
Sbjct: 121  EGFSPPFIEEATGISGVEQNCLVVAAKVRDSLVQSKIDPEIVSAFDLGGAELLYEIRLLN 180

Query: 1326 VTQRTAAARLIVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLA 1147
              QR AAAR I E + DAKGAQ+LARA+KDFPRRR +RGWESFDY +P DCLSFM+YR +
Sbjct: 181  GQQRFAAARYIAENRLDAKGAQDLARAMKDFPRRRGDRGWESFDYALPGDCLSFMFYRQS 240

Query: 1146 LEHRD-LELRNVGLEKALAMAGSDRAVSKVLEELER---KVGDVVGKENVAARVPVVRMK 979
             EH++  E R   LE+AL +A S++A S+VL ELER       V G      RVP+VRM 
Sbjct: 241  REHKNPSEQRTAALEQALEVAESEKAKSRVLRELERGGEAKDGVEGNVEEGVRVPIVRMM 300

Query: 978  VGEVSEATTVTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVV 799
            +GEV+EA++V VLPVCR+EEREKEV+EAPWEC  EGEFGVV AEK W+RWVVLPGWEPVV
Sbjct: 301  IGEVAEASSVVVLPVCRAEEREKEVLEAPWECRNEGEFGVVLAEKGWTRWVVLPGWEPVV 360

Query: 798  GLKRGGVVVAFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVSKGDFGLKVE 619
            GL++GGVVV+F DARALPW+ NRWYKEE ILVV             FYLV+  D GLKV 
Sbjct: 361  GLEKGGVVVSFVDARALPWRTNRWYKEEPILVVADRSKKEVEADGGFYLVAVDD-GLKVV 419

Query: 618  RGSALKELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
            RGSALKE  V+ESLGTVVLV+RPP+E+ + QL++EDWE
Sbjct: 420  RGSALKEKDVKESLGTVVLVIRPPKEDIDDQLSDEDWE 457


>ref|XP_002521962.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Ricinus
            communis]
 gb|EEF40366.1| conserved hypothetical protein [Ricinus communis]
          Length = 450

 Score =  493 bits (1269), Expect = e-166
 Identities = 274/454 (60%), Positives = 327/454 (72%), Gaps = 16/454 (3%)
 Frame = -3

Query: 1818 VLSVNVNT---LSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEPLQQ 1648
            +LS  VNT   +SLS P         +  F+   P  +    +PISA +IPS P    QQ
Sbjct: 1    MLSATVNTHIPISLSNPNKPFSSSFITPLFTYVSPSSQKTQLKPISAALIPSTPPPSNQQ 60

Query: 1647 LYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITG 1468
            LY               SLD  GRL++LANRLGLWY+YAPLIPSL QEGF  P+IEE TG
Sbjct: 61   LYQPFRPPPSPIPSQFSSLDTAGRLEVLANRLGLWYEYAPLIPSLIQEGFSPPSIEESTG 120

Query: 1467 ISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVE 1288
            ISGVEQNRLVVAA+VR+SL QS+   EI+  FD GG  LLYEIRLLS  QR AAAR IVE
Sbjct: 121  ISGVEQNRLVVAAKVRESLTQSQTAAEIVSEFDTGGAELLYEIRLLSAPQRAAAARFIVE 180

Query: 1287 EKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHR-DLELRNVG 1111
             + DAKGA++LARA+KDFPRRR ++GWESFDYT+P DCLSFMYYR + EH+   E R   
Sbjct: 181  NRLDAKGAEDLARAMKDFPRRRGDKGWESFDYTLPGDCLSFMYYRQSREHKTPSEPRTNA 240

Query: 1110 LEKALAMAGSDRAVSKVLEELERKVGDVVGKENV------AARVPVVRMKVGEVSEATTV 949
            LE+AL +A S++A ++VL+ELE   GD  GKE        A RVPVVR+++GEV+EAT+V
Sbjct: 241  LERALDVAESEKAKNEVLKELE---GDSEGKEEKEGEVGDATRVPVVRLRIGEVAEATSV 297

Query: 948  TVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVA 769
             VLPVCR+ ++EKE+ EAPWEC +EGEFGVV AEK W RWVVLPGWEPVVGL++GGVVVA
Sbjct: 298  VVLPVCRALQKEKEIWEAPWECKSEGEFGVVVAEKGWERWVVLPGWEPVVGLEKGGVVVA 357

Query: 768  FADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVS---KGD---FGLKVERGSA 607
            F DARALPW+VNRWYKEEAILVV           D FYLV+    GD    GL+VERGS 
Sbjct: 358  FPDARALPWKVNRWYKEEAILVVADRGSKEVNANDGFYLVAVDGSGDGRSGGLEVERGSI 417

Query: 606  LKELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
            LKE GVEESLGTVVLVVRPP+E+++ QL++E+WE
Sbjct: 418  LKERGVEESLGTVVLVVRPPKEQTD-QLSDENWE 450


>ref|XP_009364456.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Pyrus x
            bretschneideri]
          Length = 452

 Score =  491 bits (1265), Expect = e-166
 Identities = 264/439 (60%), Positives = 311/439 (70%), Gaps = 8/439 (1%)
 Frame = -3

Query: 1797 TLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPN-EPLQQLYXXXXXXX 1621
            T   ST FL  H         P     K    +PISAT+ PS  + +  QQ+Y       
Sbjct: 22   TFLSSTTFLNPH--------PPPLHHPKPLSPKPISATLTPSSSSKQQQQQVYQPFRPPP 73

Query: 1620 XXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGVEQNRL 1441
                    SLDANGRL+ILANRLGLW++YAPLIPSLTQEGF  PTIEEITGIS VEQNRL
Sbjct: 74   SPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLTQEGFTPPTIEEITGISSVEQNRL 133

Query: 1440 VVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFDAKGAQ 1261
            VVAA+VRDSL+QS  DPEI+  FDLGG  LLYEIRLLSV QR AAAR I+E K DAKG Q
Sbjct: 134  VVAAKVRDSLIQSNTDPEIVSDFDLGGSELLYEIRLLSVQQRAAAARFIIENKLDAKGTQ 193

Query: 1260 ELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNVGLEKALAMAG 1084
            +LAR+IKDFPRRR E+GWESFDY+   DCL FMY+R A EH++  E R   LE+AL +A 
Sbjct: 194  DLARSIKDFPRRRTEKGWESFDYSSAGDCLGFMYFRQAREHKNPSEPRTAALEQALKVAQ 253

Query: 1083 SDRAVSKVLEEL----ERKVGDVVGKENVAARVPVVRMKVGEVSEATTVTVLPVCRSEER 916
            +D+A   +L+EL    E K G+      V  RVPVVR+K GEV+E+T V + PVCR+EE+
Sbjct: 254  TDKAKKVILKELEGEGEEKEGEGEDDVAVGVRVPVVRLKFGEVAESTKVVIFPVCRAEEK 313

Query: 915  EKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALPWQV 736
             K+VMEAPWEC +EGE GV+ AEK W RWVVLPGWEPVV L++GGVVV+F+DAR LPW+V
Sbjct: 314  NKDVMEAPWECRSEGELGVMVAEKGWKRWVVLPGWEPVVSLEKGGVVVSFSDARVLPWKV 373

Query: 735  NRWYKEEAILVVXXXXXXXXXXXDEFYL--VSKGDFGLKVERGSALKELGVEESLGTVVL 562
            NRWYKEE ILVV           D FYL  V     G +V RGSALKE GVEESLGTVVL
Sbjct: 374  NRWYKEEPILVVADRSRREVEADDGFYLAAVDGEGLGFRVVRGSALKETGVEESLGTVVL 433

Query: 561  VVRPPREESEIQLAEEDWE 505
            +VRPP++E++ QL+EEDWE
Sbjct: 434  IVRPPKDETDDQLSEEDWE 452


>ref|XP_018824157.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Juglans
            regia]
          Length = 443

 Score =  491 bits (1263), Expect = e-166
 Identities = 271/449 (60%), Positives = 324/449 (72%), Gaps = 11/449 (2%)
 Frame = -3

Query: 1818 VLSVNVNTLS--LSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIP-SKPNEPLQQ 1648
            ++SV VNT     S+ FL N H   S+     FP+Q     +PISAT  P SKP    +Q
Sbjct: 1    MVSVTVNTFKPLFSSTFL-NPHPALSLPLHSPFPKQPH---KPISATFTPPSKPQH--RQ 54

Query: 1647 LYXXXXXXXXXXXXXXXS-LDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEIT 1471
            LY                 LD + R+DILANRLGLW++YAPLIP+L +EGF   +IEE T
Sbjct: 55   LYQPFRPPPTSPLPAQFRSLDLSSRIDILANRLGLWFEYAPLIPTLIREGFSPSSIEEST 114

Query: 1470 GISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIV 1291
            GISGVEQNRLVVAAQVRDSL+QS  DPEIL  FD GG  LLYEIRLLS  QR AAA  IV
Sbjct: 115  GISGVEQNRLVVAAQVRDSLLQSNTDPEILSSFDTGGAELLYEIRLLSAQQRAAAASYIV 174

Query: 1290 EEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNV 1114
            E++FDAKGAQ+LARA+KDFPRRR ++GWESFDY +P DCLSFMYYR + EH+D  E R  
Sbjct: 175  EQRFDAKGAQDLARAMKDFPRRRGDKGWESFDYALPGDCLSFMYYRQSREHKDPSEERTA 234

Query: 1113 GLEKALAMAGSDRAVSKVLEELERK---VGDVVGKENVAARVPVVRMKVGEVSEATTVTV 943
             LE+AL +A +++A S++LE+LE K    G + G      RVPVVR+K+GEV+EA++V V
Sbjct: 235  SLEQALRVAQTEKAKSRILEDLEGKGEGKGGMEGDMEYGVRVPVVRLKIGEVAEASSVVV 294

Query: 942  LPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFA 763
            LPVCR+EE E  ++EAPWEC +EGEFGVV AEKAW RWVVLPGW PV+ L +GGV V+F 
Sbjct: 295  LPVCRAEEMEGGILEAPWECRSEGEFGVVVAEKAWKRWVVLPGWTPVMELGKGGVAVSFG 354

Query: 762  DARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLV---SKGDFGLKVERGSALKELG 592
            DARALPW+ NRWYKEEAILVV           D FYLV   S G   LKVERGSALKE+G
Sbjct: 355  DARALPWKANRWYKEEAILVVADRGRKEVAADDGFYLVAVDSDGRGALKVERGSALKEMG 414

Query: 591  VEESLGTVVLVVRPPREESEIQLAEEDWE 505
            V+ESLGTVVLVVRPPRE+++ QL++EDWE
Sbjct: 415  VKESLGTVVLVVRPPREDTDDQLSDEDWE 443


>ref|XP_008350639.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus
            domestica]
          Length = 450

 Score =  490 bits (1261), Expect = e-165
 Identities = 265/437 (60%), Positives = 311/437 (71%), Gaps = 6/437 (1%)
 Frame = -3

Query: 1797 TLSLSTPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEPLQQ-LYXXXXXXX 1621
            T   ST FL  H         P     K    +PISAT+ PS  ++  QQ LY       
Sbjct: 22   TFLSSTTFLNPH--------PPPLHHTKPLSPKPISATLTPSSSSQQQQQQLYQPFRPPP 73

Query: 1620 XXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEEITGISGVEQNRL 1441
                    SLDANGRL+ILANRLGLW+++APLIPSLTQEGF APTIEEITGIS VEQNRL
Sbjct: 74   SPIPSKFRSLDANGRLEILANRLGLWFEFAPLIPSLTQEGFTAPTIEEITGISSVEQNRL 133

Query: 1440 VVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARLIVEEKFDAKGAQ 1261
            VVAA+VRDSL+QS  DPEI+  FD+ G  LLYEIRLLSV QR AAAR I+E K DAKG Q
Sbjct: 134  VVAAKVRDSLIQSNTDPEIVSEFDVRGSELLYEIRLLSVQQRAAAARFIIENKLDAKGTQ 193

Query: 1260 ELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELRNVGLEKALAMAG 1084
            +LAR+IKDFPRR  E GWESFDY    DCL FMY+R A EH++  E R   LE+AL +A 
Sbjct: 194  DLARSIKDFPRRGTENGWESFDYASAGDCLGFMYFRQAREHKNPSEPRTAALEQALKVAQ 253

Query: 1083 SDRAVSKVLEELERKVGDVVGKENVA--ARVPVVRMKVGEVSEATTVTVLPVCRSEEREK 910
            +D+A   +L+ELE +  +   +++VA   RVPVVR+K GEV+E+T V +LPVCR+EE++K
Sbjct: 254  TDKAKKVILKELEGESEEKEEEDDVAVGVRVPVVRLKFGEVAESTKVVILPVCRAEEKDK 313

Query: 909  EVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVVAFADARALPWQVNR 730
            EVMEAPWEC +EGE GV+ AEK W RWVVLPGWEPVV L +GGVVV+F DAR LPW+VNR
Sbjct: 314  EVMEAPWECRSEGELGVMVAEKGWKRWVVLPGWEPVVSLGKGGVVVSFGDARVLPWKVNR 373

Query: 729  WYKEEAILVVXXXXXXXXXXXDEFYL--VSKGDFGLKVERGSALKELGVEESLGTVVLVV 556
            WYKEE ILVV           D FYL  V     G KV RGSALKE GVEESLGTVVL+V
Sbjct: 374  WYKEEPILVVADRSRREVEADDGFYLAAVDGEGLGFKVVRGSALKETGVEESLGTVVLIV 433

Query: 555  RPPREESEIQLAEEDWE 505
            RPPR+E++ QL+EEDWE
Sbjct: 434  RPPRDEADDQLSEEDWE 450


>ref|XP_024189316.1| rubisco accumulation factor 1.1, chloroplastic-like [Rosa chinensis]
          Length = 448

 Score =  488 bits (1256), Expect = e-164
 Identities = 263/451 (58%), Positives = 323/451 (71%), Gaps = 13/451 (2%)
 Frame = -3

Query: 1818 VLSVNVNTLSLSTPFLTNHHHHQSIAFSPQFPQ--QKSHCSRPISATI------IPSKPN 1663
            +LS+  NTL    PF +      +   +P  P         +PISA+I       P    
Sbjct: 1    MLSLTSNTLK---PFFSPFTSTSTTTLNPHPPHLLYPKPSLKPISASIQNFPSSTPKPKP 57

Query: 1662 EPLQQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTI 1483
            +P QQ+Y               SLDANGRL+ILANRLGLWY+ APLIPSL Q+GF  PTI
Sbjct: 58   KPNQQVYQPFRPPPSPIPEKYRSLDANGRLEILANRLGLWYELAPLIPSLLQQGFTPPTI 117

Query: 1482 EEITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAA 1303
            EEITG+S VEQNRLVVAA+VRDSL+ S+ DPEI+  FD GG  LLYEIRLLSV QR AAA
Sbjct: 118  EEITGMSSVEQNRLVVAAKVRDSLIHSKTDPEIVAEFDTGGSELLYEIRLLSVQQRAAAA 177

Query: 1302 RLIVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LE 1126
            R I+E+K DAKGA++LARA KDFPRRR ++GWESFDYT P DCL+FMYYR A EH++  E
Sbjct: 178  RFILEKKLDAKGAEDLARATKDFPRRRGDKGWESFDYTHPGDCLAFMYYRQAREHKNPSE 237

Query: 1125 LRNVGLEKALAMAGSDRAVSKVLEELERKVGDVVGKENVAA--RVPVVRMKVGEVSEATT 952
             R   LE+AL +  S++A + +L+EL  + G+   + +V A  +VPVVR++ GEV+E++ 
Sbjct: 238  PRTSALEEALKVVESEKARNVILKELGGESGESEEEGDVVAGVKVPVVRLQFGEVAESSR 297

Query: 951  VTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGVVV 772
            V +LPVC++EE++KEVMEAPWEC +EGEFGVV AEK W RWVVLPGWEPVVGL +GGVVV
Sbjct: 298  VVILPVCKAEEKDKEVMEAPWECESEGEFGVVVAEKGWKRWVVLPGWEPVVGLGKGGVVV 357

Query: 771  AFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVSK--GDFGLKVERGSALKE 598
            +F+DAR LPW+VNRWYKEE ILVV           D FYL +   GD G KVERGSALKE
Sbjct: 358  SFSDARVLPWKVNRWYKEEPILVVADRSKKDVEADDGFYLAAMDGGDMGFKVERGSALKE 417

Query: 597  LGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
             GV ESLGTVVL+VRPP++E+E +LA+EDWE
Sbjct: 418  AGVTESLGTVVLIVRPPKDETENELADEDWE 448


>ref|XP_021677972.1| rubisco accumulation factor 1.1, chloroplastic-like [Hevea
            brasiliensis]
          Length = 452

 Score =  488 bits (1255), Expect = e-164
 Identities = 274/457 (59%), Positives = 321/457 (70%), Gaps = 19/457 (4%)
 Frame = -3

Query: 1818 VLSVNVNT---LSLST---PFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSKPNEP 1657
            +LS  VN    +SLS    PF ++   H S  F    P  K+   +PISAT+IP+ P   
Sbjct: 1    MLSATVNAHMLISLSNSNKPFSSSFLSHYSSLFISLSPSPKTPL-KPISATLIPASPPPS 59

Query: 1656 LQQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAPTIEE 1477
             QQLY               SLD   RLDILANRLGLWY+YA LIPSL QEGF  P+IEE
Sbjct: 60   NQQLYQPFRPPPSPLPSQYRSLDTASRLDILANRLGLWYEYATLIPSLIQEGFTPPSIEE 119

Query: 1476 ITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTAAARL 1297
             TGISGVEQNRLVVAAQVR+SLVQS  +P+I+  FD GG  LLYEIRLLS TQR AAAR 
Sbjct: 120  CTGISGVEQNRLVVAAQVRESLVQSNTEPQIVSAFDTGGAELLYEIRLLSATQRAAAARF 179

Query: 1296 IVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD-LELR 1120
            I+E K DAKGAQ+LAR++KD+PRRR E+ WESFDYT+P DCLSFMYYR A EH++  E R
Sbjct: 180  IIERKLDAKGAQDLARSMKDYPRRRGEKAWESFDYTLPGDCLSFMYYRQAREHKNPSEQR 239

Query: 1119 NVGLEKALAMAGSDRAVSKVLEELERKVGDVVGKENV------AARVPVVRMKVGEVSEA 958
               LE AL +A S++A S VL EL   +G+  G++          RVPVVR+K+GEV+EA
Sbjct: 240  TNALEMALDVAVSEKAKSAVLSEL---LGEGEGEDEKEEEIRDGVRVPVVRLKIGEVAEA 296

Query: 957  TTVTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGGV 778
            T+V VLPVCR+EERE+E++EAPWEC TEGEFGVV AEK W RWVVLP W+PVVGL++ GV
Sbjct: 297  TSVVVLPVCRAEEREREILEAPWECRTEGEFGVVVAEKGWKRWVVLPRWQPVVGLEK-GV 355

Query: 777  VVAFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVSKGDFG------LKVER 616
            VVAF DAR LPW+VNR YKEEAILVV             FYLV+  D G      LKVER
Sbjct: 356  VVAFTDARVLPWKVNRLYKEEAILVVADRGRKKVNVDGGFYLVAVDDNGDGRSNALKVER 415

Query: 615  GSALKELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
            GS LKE GV ES GTVVLVVRPP+EE++ QL +EDWE
Sbjct: 416  GSELKERGVGESFGTVVLVVRPPKEETDDQLCDEDWE 452


>ref|XP_021888657.1| rubisco accumulation factor 1.1, chloroplastic [Carica papaya]
          Length = 446

 Score =  487 bits (1253), Expect = e-164
 Identities = 265/455 (58%), Positives = 319/455 (70%), Gaps = 17/455 (3%)
 Frame = -3

Query: 1818 VLSVNVNTLSL--------STPFLTNHHHHQSIAFSPQFPQQKSHCSRPISATIIPSK-- 1669
            +LSV  NT  L        +T FLT H         P  P  K    RPISAT+IP+   
Sbjct: 1    MLSVTTNTFKLIISSPIHSTTNFLTTHQ--------PPSPNLKPSL-RPISATLIPAPTP 51

Query: 1668 PNEPLQQLYXXXXXXXXXXXXXXXSLDANGRLDILANRLGLWYDYAPLIPSLTQEGFIAP 1489
            P+   QQLY               SLDA GRLD+LA+RLGLW++YAPLIPSL QEGF +P
Sbjct: 52   PSNQQQQLYQPFRPPPSPVPSQFKSLDAAGRLDVLASRLGLWFEYAPLIPSLYQEGFASP 111

Query: 1488 TIEEITGISGVEQNRLVVAAQVRDSLVQSEIDPEILGYFDLGGDALLYEIRLLSVTQRTA 1309
            +IEE TGISGVEQNRLVVAAQVR+SLVQS  DP+++  FD GG  LLYE+RLLS  QR A
Sbjct: 112  SIEEYTGISGVEQNRLVVAAQVRESLVQSNTDPDLVAEFDTGGAELLYELRLLSAAQRAA 171

Query: 1308 AARLIVEEKFDAKGAQELARAIKDFPRRRKERGWESFDYTVPRDCLSFMYYRLALEHRD- 1132
            AAR I+E +FDAKGAQ+LARA+KD+PRRR +RGW+ FDY++P DCLSFMYYR + EH++ 
Sbjct: 172  AARFIIENRFDAKGAQDLARAMKDYPRRRGDRGWDFFDYSLPGDCLSFMYYRQSREHQNP 231

Query: 1131 LELRNVGLEKALAMAGSDRAVSKVLEELERKVGDVVGKEN---VAARVPVVRMKVGEVSE 961
               R   L++AL +A S++A  +V  ELE       GKE+      RVPVVRMK+GEV+E
Sbjct: 232  SSERTAALQQALEVAESEKAKGEVSRELEGDSEKKGGKEDGVEGTVRVPVVRMKIGEVAE 291

Query: 960  ATTVTVLPVCRSEEREKEVMEAPWECGTEGEFGVVAAEKAWSRWVVLPGWEPVVGLKRGG 781
            A++V VLPVCR+EE E E++E PWEC ++GEFGVV +EK W RWVVLPGWEPV GL  GG
Sbjct: 292  ASSVVVLPVCRAEESEAELLEVPWECKSKGEFGVVVSEKGWKRWVVLPGWEPVAGLGNGG 351

Query: 780  VVVAFADARALPWQVNRWYKEEAILVVXXXXXXXXXXXDEFYLVSKGD---FGLKVERGS 610
            VVVAF DARALPW+  RWYKEE +LVV           D FYLV+  D    GLK+ERG 
Sbjct: 352  VVVAFGDARALPWKTKRWYKEEPVLVVADRGRKEVKADDGFYLVNVADDNGAGLKIERGL 411

Query: 609  ALKELGVEESLGTVVLVVRPPREESEIQLAEEDWE 505
            +LKE GVEESLGTVVLVVRPP+EE + QL++EDWE
Sbjct: 412  SLKEAGVEESLGTVVLVVRPPKEEIDDQLSDEDWE 446