BLASTX nr result
ID: Acanthopanax21_contig00001561
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00001561
(1004 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094249.1| replication protein A 32 kDa subunit B isofo... 118 2e-27
ref|XP_011094248.1| replication protein A 32 kDa subunit B isofo... 118 2e-27
ref|XP_011094247.1| replication protein A 32 kDa subunit B isofo... 118 2e-27
gb|PIN06588.1| Single-stranded DNA-binding replication protein A... 115 2e-26
ref|XP_019254534.1| PREDICTED: replication protein A 32 kDa subu... 115 2e-26
ref|XP_016475008.1| PREDICTED: replication protein A 32 kDa subu... 115 2e-26
ref|XP_019254536.1| PREDICTED: replication protein A 32 kDa subu... 115 2e-26
ref|XP_016475019.1| PREDICTED: replication protein A 32 kDa subu... 114 2e-26
ref|XP_009770104.1| PREDICTED: replication protein A 32 kDa subu... 115 3e-26
ref|XP_009770105.1| PREDICTED: replication protein A 32 kDa subu... 114 4e-26
ref|XP_017255842.1| PREDICTED: replication protein A 32 kDa subu... 113 1e-25
ref|XP_016475001.1| PREDICTED: replication protein A 32 kDa subu... 111 4e-25
ref|XP_016475015.1| PREDICTED: replication protein A 32 kDa subu... 111 5e-25
ref|XP_009589405.1| PREDICTED: replication protein A 32 kDa subu... 111 6e-25
ref|XP_009589406.1| PREDICTED: replication protein A 32 kDa subu... 111 9e-25
ref|XP_015055540.1| PREDICTED: replication protein A 32 kDa subu... 109 2e-24
ref|NP_001316348.1| replication protein A 32 kDa subunit B [Sola... 109 3e-24
ref|XP_015055539.1| PREDICTED: replication protein A 32 kDa subu... 109 4e-24
ref|XP_023905624.1| replication protein A 32 kDa subunit A-like ... 102 1e-23
ref|XP_010261781.1| PREDICTED: replication protein A 32 kDa subu... 108 1e-23
>ref|XP_011094249.1| replication protein A 32 kDa subunit B isoform X3 [Sesamum indicum]
Length = 276
Score = 118 bits (295), Expect = 2e-27
Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 11/100 (11%)
Frame = +2
Query: 20 GHIPNSA-----------PSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQ 166
GH+PNSA PSN S V Y+MDG+ GIDKIVLNYLQQPSC+A E GVHR++
Sbjct: 178 GHMPNSAVNTPSKGYQPTPSNHHS-VQYNMDGVKGIDKIVLNYLQQPSCIAREKGVHRNE 236
Query: 167 IARDLNIPTEKLMDSIAALEAEGLIYSSVDEYHFRSTHNG 286
+A+ LNIP K+ ++I +LE+EGLIYS++DE+H++ST NG
Sbjct: 237 LAQQLNIPDRKISEAIESLESEGLIYSTIDEFHYKSTANG 276
>ref|XP_011094248.1| replication protein A 32 kDa subunit B isoform X2 [Sesamum indicum]
Length = 278
Score = 118 bits (295), Expect = 2e-27
Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 11/100 (11%)
Frame = +2
Query: 20 GHIPNSA-----------PSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQ 166
GH+PNSA PSN S V Y+MDG+ GIDKIVLNYLQQPSC+A E GVHR++
Sbjct: 180 GHMPNSAVNTPSKGYQPTPSNHHS-VQYNMDGVKGIDKIVLNYLQQPSCIAREKGVHRNE 238
Query: 167 IARDLNIPTEKLMDSIAALEAEGLIYSSVDEYHFRSTHNG 286
+A+ LNIP K+ ++I +LE+EGLIYS++DE+H++ST NG
Sbjct: 239 LAQQLNIPDRKISEAIESLESEGLIYSTIDEFHYKSTANG 278
>ref|XP_011094247.1| replication protein A 32 kDa subunit B isoform X1 [Sesamum indicum]
Length = 279
Score = 118 bits (295), Expect = 2e-27
Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 11/100 (11%)
Frame = +2
Query: 20 GHIPNSA-----------PSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQ 166
GH+PNSA PSN S V Y+MDG+ GIDKIVLNYLQQPSC+A E GVHR++
Sbjct: 181 GHMPNSAVNTPSKGYQPTPSNHHS-VQYNMDGVKGIDKIVLNYLQQPSCIAREKGVHRNE 239
Query: 167 IARDLNIPTEKLMDSIAALEAEGLIYSSVDEYHFRSTHNG 286
+A+ LNIP K+ ++I +LE+EGLIYS++DE+H++ST NG
Sbjct: 240 LAQQLNIPDRKISEAIESLESEGLIYSTIDEFHYKSTANG 279
>gb|PIN06588.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit [Handroanthus impetiginosus]
Length = 279
Score = 115 bits (289), Expect = 2e-26
Identities = 55/92 (59%), Positives = 75/92 (81%)
Frame = +2
Query: 11 PTAGHIPNSAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIP 190
P+ G+ P PSN FS V Y++DG+ G+DKIVLNYLQQPSC+A E GVHR+++A+ LNIP
Sbjct: 191 PSKGYQPT--PSNHFS-VQYNVDGVKGLDKIVLNYLQQPSCIAREKGVHRNELAQQLNIP 247
Query: 191 TEKLMDSIAALEAEGLIYSSVDEYHFRSTHNG 286
K+ ++I +LE+EGLIYS+VDE+H++ST NG
Sbjct: 248 EHKISEAIESLESEGLIYSTVDEFHYKSTANG 279
>ref|XP_019254534.1| PREDICTED: replication protein A 32 kDa subunit B isoform X1
[Nicotiana attenuata]
Length = 282
Score = 115 bits (289), Expect = 2e-26
Identities = 52/101 (51%), Positives = 77/101 (76%), Gaps = 11/101 (10%)
Frame = +2
Query: 17 AGHIPNSA-----------PSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRD 163
+G +P+SA PS QF Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+
Sbjct: 182 SGQVPSSAANTPLKGYQASPSTQFQFPGYNMDGIRGVDKMVLDYLQQPSCLAREKGVHRN 241
Query: 164 QIARDLNIPTEKLMDSIAALEAEGLIYSSVDEYHFRSTHNG 286
++A+ L +P+EK++++I +LE+EGL+YS++DEYH++ST NG
Sbjct: 242 ELAQQLKVPSEKILEAIESLESEGLVYSTIDEYHYKSTANG 282
>ref|XP_016475008.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X2
[Nicotiana tabacum]
Length = 255
Score = 115 bits (287), Expect = 2e-26
Identities = 48/84 (57%), Positives = 72/84 (85%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
++PS QF Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I
Sbjct: 172 ASPSTQFQFPGYNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAI 231
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE+EGL+YS++DEYH++ST NG
Sbjct: 232 ESLESEGLVYSTIDEYHYKSTANG 255
>ref|XP_019254536.1| PREDICTED: replication protein A 32 kDa subunit B isoform X2
[Nicotiana attenuata]
gb|OIS97857.1| replication protein a 32 kda subunit b [Nicotiana attenuata]
Length = 280
Score = 115 bits (288), Expect = 2e-26
Identities = 53/101 (52%), Positives = 78/101 (77%), Gaps = 11/101 (10%)
Frame = +2
Query: 17 AGHIPNSA-----------PSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRD 163
+G +P+SA PS QF G Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+
Sbjct: 182 SGQVPSSAANTPLKGYQASPSTQFPG--YNMDGIRGVDKMVLDYLQQPSCLAREKGVHRN 239
Query: 164 QIARDLNIPTEKLMDSIAALEAEGLIYSSVDEYHFRSTHNG 286
++A+ L +P+EK++++I +LE+EGL+YS++DEYH++ST NG
Sbjct: 240 ELAQQLKVPSEKILEAIESLESEGLVYSTIDEYHYKSTANG 280
>ref|XP_016475019.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X4
[Nicotiana tabacum]
Length = 253
Score = 114 bits (286), Expect = 2e-26
Identities = 49/84 (58%), Positives = 73/84 (86%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
++PS QF G Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I
Sbjct: 172 ASPSTQFPG--YNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAI 229
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE+EGL+YS++DEYH++ST NG
Sbjct: 230 ESLESEGLVYSTIDEYHYKSTANG 253
>ref|XP_009770104.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X1
[Nicotiana sylvestris]
Length = 282
Score = 115 bits (287), Expect = 3e-26
Identities = 48/84 (57%), Positives = 72/84 (85%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
++PS QF Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I
Sbjct: 199 ASPSTQFQFPGYNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAI 258
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE+EGL+YS++DEYH++ST NG
Sbjct: 259 ESLESEGLVYSTIDEYHYKSTANG 282
>ref|XP_009770105.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X2
[Nicotiana sylvestris]
Length = 280
Score = 114 bits (286), Expect = 4e-26
Identities = 49/84 (58%), Positives = 73/84 (86%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
++PS QF G Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I
Sbjct: 199 ASPSTQFPG--YNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAI 256
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE+EGL+YS++DEYH++ST NG
Sbjct: 257 ESLESEGLVYSTIDEYHYKSTANG 280
>ref|XP_017255842.1| PREDICTED: replication protein A 32 kDa subunit B [Daucus carota
subsp. sativus]
Length = 280
Score = 113 bits (283), Expect = 1e-25
Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 11/106 (10%)
Frame = +2
Query: 2 GGAPTAGHIPNSA-----------PSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEM 148
GG P AGH+P A PSNQF GV YS G+DK+VL +LQQPSC++ E
Sbjct: 175 GGGPVAGHMPTPAASMPFQGHQATPSNQFPGVQYSSGDFGGVDKMVLEFLQQPSCVSLET 234
Query: 149 GVHRDQIARDLNIPTEKLMDSIAALEAEGLIYSSVDEYHFRSTHNG 286
GVH+D IA+ L IP E ++ SI L EGL+YSSVDE+HF+ST NG
Sbjct: 235 GVHQDVIAKGLRIPREAVIKSIDVLVQEGLVYSSVDEFHFKSTTNG 280
>ref|XP_016475001.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X1
[Nicotiana tabacum]
Length = 255
Score = 111 bits (278), Expect = 4e-25
Identities = 47/81 (58%), Positives = 69/81 (85%)
Frame = +2
Query: 44 SNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSIAAL 223
S QF Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I +L
Sbjct: 175 STQFQFPGYNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAIESL 234
Query: 224 EAEGLIYSSVDEYHFRSTHNG 286
E+EGL+YS++DEYH++ST NG
Sbjct: 235 ESEGLVYSTIDEYHYKSTANG 255
>ref|XP_016475015.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X3
[Nicotiana tabacum]
Length = 253
Score = 111 bits (277), Expect = 5e-25
Identities = 48/81 (59%), Positives = 70/81 (86%)
Frame = +2
Query: 44 SNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSIAAL 223
S QF G Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I +L
Sbjct: 175 STQFPG--YNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAIESL 232
Query: 224 EAEGLIYSSVDEYHFRSTHNG 286
E+EGL+YS++DEYH++ST NG
Sbjct: 233 ESEGLVYSTIDEYHYKSTANG 253
>ref|XP_009589405.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X1
[Nicotiana tomentosiformis]
Length = 282
Score = 111 bits (278), Expect = 6e-25
Identities = 47/81 (58%), Positives = 69/81 (85%)
Frame = +2
Query: 44 SNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSIAAL 223
S QF Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I +L
Sbjct: 202 STQFQFPGYNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAIESL 261
Query: 224 EAEGLIYSSVDEYHFRSTHNG 286
E+EGL+YS++DEYH++ST NG
Sbjct: 262 ESEGLVYSTIDEYHYKSTANG 282
>ref|XP_009589406.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X2
[Nicotiana tomentosiformis]
Length = 280
Score = 111 bits (277), Expect = 9e-25
Identities = 48/81 (59%), Positives = 70/81 (86%)
Frame = +2
Query: 44 SNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSIAAL 223
S QF G Y+MDG+ G+DK+VL+YLQQPSCLA E GVHR+++A+ L +P+EK++++I +L
Sbjct: 202 STQFPG--YNMDGIRGVDKMVLDYLQQPSCLAREKGVHRNELAQQLKVPSEKILEAIESL 259
Query: 224 EAEGLIYSSVDEYHFRSTHNG 286
E+EGL+YS++DEYH++ST NG
Sbjct: 260 ESEGLVYSTIDEYHYKSTANG 280
>ref|XP_015055540.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X2
[Solanum pennellii]
Length = 242
Score = 109 bits (272), Expect = 2e-24
Identities = 48/84 (57%), Positives = 71/84 (84%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
++ SNQF G YSMDG+ G+DK+VL+YLQQPSCLA E GVHR+Q+ + L +P+EK+ +++
Sbjct: 161 ASASNQFPG--YSMDGIRGVDKMVLDYLQQPSCLALEKGVHRNQLVQQLQLPSEKISEAL 218
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE+EGLIY+++DE+H++ST NG
Sbjct: 219 DSLESEGLIYTTIDEFHYKSTGNG 242
>ref|NP_001316348.1| replication protein A 32 kDa subunit B [Solanum lycopersicum]
gb|ALP75899.1| RPA32b [Solanum lycopersicum]
Length = 280
Score = 109 bits (273), Expect = 3e-24
Identities = 48/84 (57%), Positives = 71/84 (84%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
++ SNQF G YSMDG+ G+DK+VL+YLQQPSCLA E GVHR+Q+ + L +P+EK+ +++
Sbjct: 199 ASASNQFPG--YSMDGIRGVDKMVLDYLQQPSCLALEKGVHRNQLVQQLQLPSEKISEAL 256
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE+EGLIY+++DE+H++ST NG
Sbjct: 257 ESLESEGLIYTTIDEFHYKSTGNG 280
>ref|XP_015055539.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X1
[Solanum pennellii]
Length = 279
Score = 109 bits (272), Expect = 4e-24
Identities = 48/84 (57%), Positives = 71/84 (84%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
++ SNQF G YSMDG+ G+DK+VL+YLQQPSCLA E GVHR+Q+ + L +P+EK+ +++
Sbjct: 198 ASASNQFPG--YSMDGIRGVDKMVLDYLQQPSCLALEKGVHRNQLVQQLQLPSEKISEAL 255
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE+EGLIY+++DE+H++ST NG
Sbjct: 256 DSLESEGLIYTTIDEFHYKSTGNG 279
>ref|XP_023905624.1| replication protein A 32 kDa subunit A-like [Quercus suber]
Length = 92
Score = 102 bits (255), Expect = 1e-23
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
+APS+Q SG +S+DGL D++VL+YLQQPS + E G+HRD+++R L P EK+M+SI
Sbjct: 10 TAPSSQLSG-QFSIDGLKSCDQLVLDYLQQPSSIGQEKGIHRDELSRQLKFPVEKIMESI 68
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE EGLIYS++DE+H++ST +G
Sbjct: 69 RSLEEEGLIYSTIDEFHYKSTASG 92
>ref|XP_010261781.1| PREDICTED: replication protein A 32 kDa subunit A [Nelumbo
nucifera]
Length = 280
Score = 108 bits (269), Expect = 1e-23
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +2
Query: 35 SAPSNQFSGVPYSMDGLNGIDKIVLNYLQQPSCLAPEMGVHRDQIARDLNIPTEKLMDSI 214
+A NQFSG +S DGL GID++VL+YLQQPS LA E GVHRD+IAR L IP +K+M+SI
Sbjct: 198 AAIPNQFSG-QFSSDGLKGIDQMVLDYLQQPSNLAQEKGVHRDEIARQLKIPLDKIMESI 256
Query: 215 AALEAEGLIYSSVDEYHFRSTHNG 286
+LE EGLIYS++DE H++ST NG
Sbjct: 257 RSLEEEGLIYSTIDECHYKSTGNG 280