BLASTX nr result
ID: Acanthopanax21_contig00001395
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00001395
(444 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020251881.1| ribulose bisphosphate carboxylase small chai... 115 6e-44
ref|XP_020251882.1| ribulose bisphosphate carboxylase small chai... 114 1e-43
ref|XP_008807113.1| PREDICTED: ribulose bisphosphate carboxylase... 108 1e-40
ref|XP_010926041.1| PREDICTED: ribulose bisphosphate carboxylase... 107 5e-40
gb|AQM56815.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 107 2e-39
ref|XP_008797838.1| PREDICTED: ribulose bisphosphate carboxylase... 105 2e-39
sp|P19312.1|RBS6_LEMGI RecName: Full=Ribulose bisphosphate carbo... 106 4e-39
ref|XP_009390221.1| PREDICTED: ribulose bisphosphate carboxylase... 108 5e-39
sp|O24045.1|RBS_MUSAC RecName: Full=Ribulose bisphosphate carbox... 107 1e-38
ref|XP_020082204.1| ribulose bisphosphate carboxylase small chai... 104 3e-38
ref|XP_010916368.1| PREDICTED: ribulose bisphosphate carboxylase... 108 3e-38
gb|ABQ42552.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 106 3e-38
gb|ABA46879.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 106 3e-38
gb|ABA46887.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 106 3e-38
sp|P19311.1|RBS5_LEMGI RecName: Full=Ribulose bisphosphate carbo... 102 4e-38
ref|WP_053077049.1| hypothetical protein [Streptomyces sp. HNS054] 100 6e-38
gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 106 1e-37
sp|P19308.1|RBS2_LEMGI RecName: Full=Ribulose bisphosphate carbo... 100 2e-37
sp|P00872.2|RBS1_LEMGI RecName: Full=Ribulose bisphosphate carbo... 102 3e-37
gb|ABA46878.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 106 5e-37
>ref|XP_020251881.1| ribulose bisphosphate carboxylase small chain, chloroplastic-like
[Asparagus officinalis]
gb|ONK81510.1| uncharacterized protein A4U43_C01F29950 [Asparagus officinalis]
Length = 179
Score = 115 bits (287), Expect(2) = 6e-44
Identities = 52/69 (75%), Positives = 62/69 (89%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P QTNMVAAF+GLKST+AFP TR+ +L+KLPSNG RVQCMKVWP+EG+KKFETLSYLP
Sbjct: 18 PAQTNMVAAFSGLKSTSAFPATRRASADLAKLPSNGGRVQCMKVWPVEGIKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+++EQLIK
Sbjct: 78 TLSIEQLIK 86
Score = 90.5 bits (223), Expect(2) = 6e-44
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
N WIPCLEFC GFVYRKYHASPGYYDGRYWTMWKLPMF
Sbjct: 94 NGWIPCLEFCHEGFVYRKYHASPGYYDGRYWTMWKLPMF 132
>ref|XP_020251882.1| ribulose bisphosphate carboxylase small chain, chloroplastic-like
[Asparagus officinalis]
gb|ONK81511.1| uncharacterized protein A4U43_C01F29960 [Asparagus officinalis]
Length = 179
Score = 114 bits (284), Expect(2) = 1e-43
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P QTNMVA+F+GLKST+AFP TR+ +L+KLPSNG RVQCMKVWP+EG+KKFETLSYLP
Sbjct: 18 PAQTNMVASFSGLKSTSAFPATRRASADLAKLPSNGGRVQCMKVWPVEGIKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+++EQLIK
Sbjct: 78 TLSIEQLIK 86
Score = 90.5 bits (223), Expect(2) = 1e-43
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
N WIPCLEFC GFVYRKYHASPGYYDGRYWTMWKLPMF
Sbjct: 94 NGWIPCLEFCHEGFVYRKYHASPGYYDGRYWTMWKLPMF 132
>ref|XP_008807113.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Phoenix dactylifera]
Length = 180
Score = 108 bits (270), Expect(2) = 1e-40
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKST+AFP TR+ N+ SKLPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 18 PAQSSMVAPFTGLKSTSAFPATRRASNDFSKLPSNGGRVQCMKVWPIEGVKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+ +E L+K
Sbjct: 78 PLPIEALLK 86
Score = 85.9 bits (211), Expect(2) = 1e-40
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFCK+GFVYR+ H SPGYYDGRYWTMWKLPMF
Sbjct: 94 SRWIPCLEFCKIGFVYRENHRSPGYYDGRYWTMWKLPMF 132
>ref|XP_010926041.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Elaeis guineensis]
Length = 180
Score = 107 bits (266), Expect(2) = 5e-40
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKST+AFPVTR+ N+ SKLPSNG RV+CM+VWPIEG KKFETLSYLP
Sbjct: 18 PAQSSMVAPFTGLKSTSAFPVTRRASNDFSKLPSNGGRVRCMQVWPIEGKKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+++E L+K
Sbjct: 78 PLSIEALLK 86
Score = 85.5 bits (210), Expect(2) = 5e-40
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFCK+GFVYR+ H SPGYYDGRYWTMWKLPMF
Sbjct: 94 SGWIPCLEFCKVGFVYRENHQSPGYYDGRYWTMWKLPMF 132
>gb|AQM56815.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Dioscorea zingiberensis]
Length = 183
Score = 107 bits (266), Expect(2) = 2e-39
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKSTAAFP TRK +LS LPSNG RVQCM+VWPIEG KKFETLSYLP
Sbjct: 19 PAQSSMVAPFTGLKSTAAFPSTRKAKTDLSHLPSNGGRVQCMQVWPIEGKKKFETLSYLP 78
Query: 281 DMTVEQLIK 307
D+T QL+K
Sbjct: 79 DLTPPQLLK 87
Score = 83.6 bits (205), Expect(2) = 2e-39
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
N WIPCLEF K+GFVYR+ H SPGYYDGRYWTMWKLPMF
Sbjct: 95 NGWIPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMF 133
>ref|XP_008797838.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Phoenix dactylifera]
Length = 182
Score = 105 bits (262), Expect(2) = 2e-39
Identities = 48/69 (69%), Positives = 56/69 (81%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q +MVA F GLKST+AFP TR+ N SKLPSNG +VQCMKVWPIEG+KKFETLSYLP
Sbjct: 18 PAQASMVAPFTGLKSTSAFPATRRASNGFSKLPSNGGKVQCMKVWPIEGVKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+ +E L+K
Sbjct: 78 PLPIEALLK 86
Score = 85.1 bits (209), Expect(2) = 2e-39
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ W+PCLEFCK+GFVYR+ H SPGYYDGRYWTMWKLPMF
Sbjct: 94 SRWVPCLEFCKVGFVYRENHRSPGYYDGRYWTMWKLPMF 132
>sp|P19312.1|RBS6_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU5B,
chloroplastic; Short=RuBisCO small subunit SSU5B; Flags:
Precursor
emb|CAA35100.1| ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 106 bits (264), Expect(2) = 4e-39
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P QTNMVA FNGL+S+ AFP TRK N+LS LPSNG RV CM+VWP EG+KKFETLSYLP
Sbjct: 17 PAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76
Query: 281 DMTVEQLIK 307
++VE L K
Sbjct: 77 PLSVEDLAK 85
Score = 83.2 bits (204), Expect(2) = 4e-39
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
N+W+PC+EF K GFVYR+ HASPGYYDGRYWTMWKLPMF
Sbjct: 93 NDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMF 131
>ref|XP_009390221.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 180
Score = 108 bits (271), Expect(2) = 5e-39
Identities = 51/69 (73%), Positives = 58/69 (84%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKS +AFPVTRKP +LS LPSNG RVQCMKVWPIEGMKKFETLSYLP
Sbjct: 18 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGMKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+ E+L+K
Sbjct: 78 TLKDEELLK 86
Score = 80.1 bits (196), Expect(2) = 5e-39
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFC GFV+R+ H SPGYYDGRYWTMWKLPMF
Sbjct: 94 SKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMF 132
>sp|O24045.1|RBS_MUSAC RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor
gb|AAB63287.1| ribulose-1,5-bisphosphate carboxylase small subunit [Musa
acuminata]
Length = 180
Score = 107 bits (268), Expect(2) = 1e-38
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKS +AFPVTRKP +LS LPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 18 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
M E L+K
Sbjct: 78 TMKDEALVK 86
Score = 80.1 bits (196), Expect(2) = 1e-38
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFC GFV+R+ H SPGYYDGRYWTMWKLPMF
Sbjct: 94 SKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMF 132
>ref|XP_020082204.1| ribulose bisphosphate carboxylase small chain, chloroplastic-like
[Ananas comosus]
gb|OAY67128.1| Ribulose bisphosphate carboxylase small chain, chloroplastic
[Ananas comosus]
Length = 182
Score = 104 bits (260), Expect(2) = 3e-38
Identities = 53/82 (64%), Positives = 60/82 (73%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q NMVA F GLKS AAFP TR+ +LS LPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 17 PAQANMVAPFTGLKSAAAFPATRRSSADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLP 76
Query: 281 DMTVEQLIKHRVPPPQQLDSLL 346
++ E L+K Q+D LL
Sbjct: 77 PLSPEALLK-------QIDYLL 91
Score = 82.0 bits (201), Expect(2) = 3e-38
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFC +GFVYR+++ SPGYYDGRYWTMWKLPMF
Sbjct: 93 SGWIPCLEFCPVGFVYREHNKSPGYYDGRYWTMWKLPMF 131
>ref|XP_010916368.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Elaeis guineensis]
Length = 180
Score = 108 bits (269), Expect(2) = 3e-38
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKST+AFP TR+ N SKLPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 18 PAQSSMVAPFTGLKSTSAFPATRRASNGFSKLPSNGGRVQCMKVWPIEGLKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+++E L+K
Sbjct: 78 PLSIEALLK 86
Score = 78.6 bits (192), Expect(2) = 3e-38
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFCK+GFV R + SPGYYDGRYWTMWKLPMF
Sbjct: 94 SGWIPCLEFCKVGFVSRDNNRSPGYYDGRYWTMWKLPMF 132
>gb|ABQ42552.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
gb|ACR56377.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 106 bits (265), Expect(2) = 3e-38
Identities = 50/69 (72%), Positives = 57/69 (82%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKS +AFPVTRKP +LS LPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 18 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGLKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+ E L+K
Sbjct: 78 TLKDEALLK 86
Score = 80.1 bits (196), Expect(2) = 3e-38
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFC GFV+R+ H SPGYYDGRYWTMWKLPMF
Sbjct: 94 SKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMF 132
>gb|ABA46879.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial [Musa balbisiana]
Length = 161
Score = 106 bits (265), Expect(2) = 3e-38
Identities = 50/69 (72%), Positives = 57/69 (82%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKS +AFPVTRKP +LS LPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 16 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGLKKFETLSYLP 75
Query: 281 DMTVEQLIK 307
+ E L+K
Sbjct: 76 TLKDEALLK 84
Score = 80.1 bits (196), Expect(2) = 3e-38
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFC GFV+R+ H SPGYYDGRYWTMWKLPMF
Sbjct: 92 SKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMF 130
>gb|ABA46887.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial [Musa AAAB Group]
Length = 161
Score = 106 bits (264), Expect(2) = 3e-38
Identities = 50/69 (72%), Positives = 57/69 (82%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKS +AFPVTRKP +LS LPSNG RVQCMKVWPIEG++KFETLSYLP
Sbjct: 16 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVRKFETLSYLP 75
Query: 281 DMTVEQLIK 307
M E L+K
Sbjct: 76 TMKDEALLK 84
Score = 80.1 bits (196), Expect(2) = 3e-38
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFC GFV+R+ H SPGYYDGRYWTMWKLPMF
Sbjct: 92 SKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMF 130
>sp|P19311.1|RBS5_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU5A,
chloroplastic; Short=RuBisCO small subunit SSU5A; Flags:
Precursor
emb|CAA35099.1| ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 102 bits (255), Expect(2) = 4e-38
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA FNGL+S+ AFP TRK N+LS LPSNG RV CM+VWP EG+KKFETLSYLP
Sbjct: 17 PAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76
Query: 281 DMTVEQLIK 307
++VE L K
Sbjct: 77 PLSVEDLAK 85
Score = 83.2 bits (204), Expect(2) = 4e-38
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
N+W+PC+EF K GFVYR+ HASPGYYDGRYWTMWKLPMF
Sbjct: 93 NDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMF 131
>ref|WP_053077049.1| hypothetical protein [Streptomyces sp. HNS054]
Length = 180
Score = 99.8 bits (247), Expect(2) = 6e-38
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q+ MVA F GL+S+AAFP TR+P +LS LPSNG RVQCM+VWP EG KKFETLSYLP
Sbjct: 17 PAQSTMVAPFTGLRSSAAFPATRRPNADLSTLPSNGGRVQCMQVWPPEGKKKFETLSYLP 76
Query: 281 DMTVEQLIK 307
D+ L+K
Sbjct: 77 DLPESALLK 85
Score = 85.9 bits (211), Expect(2) = 6e-38
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ W+PCLEFCK GFV RKYH+SPGYYDGRYWTMWKLPMF
Sbjct: 93 SGWVPCLEFCKEGFVSRKYHSSPGYYDGRYWTMWKLPMF 131
>gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 106 bits (264), Expect(2) = 1e-37
Identities = 50/69 (72%), Positives = 57/69 (82%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKS +AFPVTRKP +LS LPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 18 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLP 77
Query: 281 DMTVEQLIK 307
+ E L+K
Sbjct: 78 TLKDEALLK 86
Score = 78.2 bits (191), Expect(2) = 1e-37
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEFC GFV+R+ H SPGYYDGRYWTMW LPMF
Sbjct: 94 SKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWNLPMF 132
>sp|P19308.1|RBS2_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU26,
chloroplastic; Short=RuBisCO small subunit SSU26; Flags:
Precursor
emb|CAA35101.1| ribulose bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 100 bits (249), Expect(2) = 2e-37
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q+NMVA FNGL+S+ AFP TRK LS LPSNG +V CM+VWP EG+KKFETLSYLP
Sbjct: 17 PAQSNMVAPFNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLP 76
Query: 281 DMTVEQLIK 307
++VE L K
Sbjct: 77 PLSVEDLAK 85
Score = 83.2 bits (204), Expect(2) = 2e-37
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
N+W+PC+EF K GFVYR+ HASPGYYDGRYWTMWKLPMF
Sbjct: 93 NDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMF 131
>sp|P00872.2|RBS1_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU1,
chloroplastic; Short=RuBisCO small subunit SSU1; Flags:
Precursor
emb|CAA35104.1| unnamed protein product [Lemna gibba]
Length = 173
Score = 102 bits (255), Expect(2) = 3e-37
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P QTNMV AFNG +S+ AFP TRK N+LS LPS+G RV CM+VWP EG+KKFETLSYLP
Sbjct: 13 PAQTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKKFETLSYLP 72
Query: 281 DMTVEQLIK 307
++VE L K
Sbjct: 73 PLSVEDLAK 81
Score = 80.5 bits (197), Expect(2) = 3e-37
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
N+W+PC+EF K GFVYR+ +ASPGYYDGRYWTMWKLPMF
Sbjct: 89 NDWVPCIEFSKEGFVYRENNASPGYYDGRYWTMWKLPMF 127
>gb|ABA46878.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial [Musa balbisiana]
Length = 161
Score = 106 bits (265), Expect(2) = 5e-37
Identities = 50/69 (72%), Positives = 57/69 (82%)
Frame = +2
Query: 101 PVQTNMVAAFNGLKSTAAFPVTRKPGNELSKLPSNGSRVQCMKVWPIEGMKKFETLSYLP 280
P Q++MVA F GLKS +AFPVTRKP +LS LPSNG RVQCMKVWPIEG+KKFETLSYLP
Sbjct: 16 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGLKKFETLSYLP 75
Query: 281 DMTVEQLIK 307
+ E L+K
Sbjct: 76 TLKDEALLK 84
Score = 75.9 bits (185), Expect(2) = 5e-37
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 327 NNWIPCLEFCKLGFVYRKYHASPGYYDGRYWTMWKLPMF 443
+ WIPCLEF GFV+R+ H SPGYYDGRYWTMWKLPMF
Sbjct: 92 SRWIPCLEFSHEGFVWRENHRSPGYYDGRYWTMWKLPMF 130