BLASTX nr result

ID: Acanthopanax21_contig00001094 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00001094
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara card...   157   9e-42
emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]   144   7e-41
ref|XP_023904095.1| cleavage and polyadenylation specificity fac...   152   5e-40
ref|XP_023904094.1| cleavage and polyadenylation specificity fac...   152   5e-40
gb|POE45696.1| cleavage and polyadenylation specificity factor s...   152   6e-40
ref|XP_016514199.1| PREDICTED: RNA-binding protein 25-like [Nico...   142   8e-39
ref|XP_018820439.1| PREDICTED: cleavage and polyadenylation spec...   148   2e-38
ref|XP_021818512.1| cleavage and polyadenylation specificity fac...   147   4e-38
emb|CDP13267.1| unnamed protein product [Coffea canephora]            146   9e-38
ref|XP_020426099.1| cleavage and polyadenylation specificity fac...   146   9e-38
ref|XP_021901218.1| cleavage and polyadenylation specificity fac...   145   2e-37
gb|KZM83603.1| hypothetical protein DCAR_031172 [Daucus carota s...   144   3e-37
ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation spec...   144   4e-37
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec...   144   4e-37
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec...   144   5e-37
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec...   142   3e-36
dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus foll...   141   8e-36
ref|XP_019231531.1| PREDICTED: cleavage and polyadenylation spec...   140   1e-35
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec...   140   1e-35
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   140   1e-35

>gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 636

 Score =  157 bits (397), Expect = 9e-42
 Identities = 83/152 (54%), Positives = 89/152 (58%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           P AGMW DTSMGGWGGEEHGQRTR                E SHDKG RSNA SR+KERG
Sbjct: 485 PQAGMWGDTSMGGWGGEEHGQRTRESSYGGEDGASEYGYGEASHDKGARSNAVSREKERG 544

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SER+WSGNS                               RQKER+ GYEDDWDRGQ+  
Sbjct: 545 SEREWSGNSEKRHRDDRDQDRERHDKDYKYKEEKDNYREHRQKERNAGYEDDWDRGQSST 604

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 R MPE+DHRSRSRDADYGKRRR+ SD
Sbjct: 605 RSRSRSRAMPEDDHRSRSRDADYGKRRRMRSD 636


>emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]
          Length = 168

 Score =  144 bits (364), Expect = 7e-41
 Identities = 77/151 (50%), Positives = 86/151 (56%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMWTDTSMGGWGGEEHG+RTR                E +H+K  RSN ASR+KERGS
Sbjct: 18  HAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGS 77

Query: 277 ERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXXX 98
           ERDWSGNS                               RQ+ERD   EDDWDRGQ+   
Sbjct: 78  ERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSR 137

Query: 97  XXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                R + +EDHRSRSRD DYGKRRRLPS+
Sbjct: 138 SRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 168


>ref|XP_023904095.1| cleavage and polyadenylation specificity factor subunit 6 isoform
           X2 [Quercus suber]
          Length = 655

 Score =  152 bits (385), Expect = 5e-40
 Identities = 82/154 (53%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMW DTSMGGWGGEEHG+RTR                E +H+KG RS+AASR+KERGS
Sbjct: 502 HAGMWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGNHEKGARSSAASREKERGS 561

Query: 277 ERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ---KERDLGYEDDWDRGQA 107
           ERDWSGNS                               R    +ERDLGYEDDWDRGQ+
Sbjct: 562 ERDWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDHRPRERDLGYEDDWDRGQS 621

Query: 106 XXXXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                   R MPEEDHRSRSRD DYGKRRRLPS+
Sbjct: 622 SSRPRSRSRAMPEEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_023904094.1| cleavage and polyadenylation specificity factor subunit 6 isoform
           X1 [Quercus suber]
          Length = 658

 Score =  152 bits (385), Expect = 5e-40
 Identities = 82/154 (53%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMW DTSMGGWGGEEHG+RTR                E +H+KG RS+AASR+KERGS
Sbjct: 505 HAGMWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGNHEKGARSSAASREKERGS 564

Query: 277 ERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ---KERDLGYEDDWDRGQA 107
           ERDWSGNS                               R    +ERDLGYEDDWDRGQ+
Sbjct: 565 ERDWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDHRPRERDLGYEDDWDRGQS 624

Query: 106 XXXXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                   R MPEEDHRSRSRD DYGKRRRLPS+
Sbjct: 625 SSRPRSRSRAMPEEDHRSRSRDVDYGKRRRLPSE 658


>gb|POE45696.1| cleavage and polyadenylation specificity factor subunit [Quercus
           suber]
          Length = 670

 Score =  152 bits (385), Expect = 6e-40
 Identities = 82/154 (53%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMW DTSMGGWGGEEHG+RTR                E +H+KG RS+AASR+KERGS
Sbjct: 517 HAGMWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGNHEKGARSSAASREKERGS 576

Query: 277 ERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ---KERDLGYEDDWDRGQA 107
           ERDWSGNS                               R    +ERDLGYEDDWDRGQ+
Sbjct: 577 ERDWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDHRPRERDLGYEDDWDRGQS 636

Query: 106 XXXXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                   R MPEEDHRSRSRD DYGKRRRLPS+
Sbjct: 637 SSRPRSRSRAMPEEDHRSRSRDVDYGKRRRLPSE 670


>ref|XP_016514199.1| PREDICTED: RNA-binding protein 25-like [Nicotiana tabacum]
          Length = 264

 Score =  142 bits (358), Expect = 8e-39
 Identities = 77/152 (50%), Positives = 85/152 (55%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PH GMWTDTS GGWGGEEHG+RTR                E SHDKG RS+A SR+KERG
Sbjct: 113 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG 172

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSGNS                               RQKER+  YEDD+DRGQ+  
Sbjct: 173 SERDWSGNSERRHRDEREHDRERYDREHRYKEERDGYRDYRQKERESEYEDDYDRGQSSS 232

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 R   EEDHRSRSRD +YGKRRR PS+
Sbjct: 233 RSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 264


>ref|XP_018820439.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 [Juglans regia]
 ref|XP_018820440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 [Juglans regia]
 ref|XP_018820442.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 [Juglans regia]
          Length = 652

 Score =  148 bits (373), Expect = 2e-38
 Identities = 77/154 (50%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMW +T+MGGWGGEEHG+RTR                + +H+KGVRS+AASR+KERGS
Sbjct: 499 HAGMWNETNMGGWGGEEHGRRTRESSYGGDDGASEYGYGDANHEKGVRSSAASREKERGS 558

Query: 277 ERDWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQA 107
           ERDWSG+S                                  RQ+ERD+GYEDDWDRGQ+
Sbjct: 559 ERDWSGSSERRPRDDREQDWDRPEREHRDRRYREEKDNYRDHRQRERDVGYEDDWDRGQS 618

Query: 106 XXXXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                   R +PEEDH+SRSRD DYGKRRRLPS+
Sbjct: 619 SSRPRSRSRAIPEEDHKSRSRDGDYGKRRRLPSE 652


>ref|XP_021818512.1| cleavage and polyadenylation specificity factor subunit 6 isoform
           X1 [Prunus avium]
 ref|XP_021818513.1| cleavage and polyadenylation specificity factor subunit 6 isoform
           X2 [Prunus avium]
          Length = 660

 Score =  147 bits (372), Expect = 4e-38
 Identities = 78/155 (50%), Positives = 89/155 (57%), Gaps = 4/155 (2%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMW D SMGGWGGEEHG+RTR                E +H+KG RSNA SR++ERGS
Sbjct: 506 HAGMWNDPSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSRERERGS 565

Query: 277 ERDWSGNS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQ 110
           ERDWSGNS                                   RQ+ERD+GYEDDWDRGQ
Sbjct: 566 ERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQ 625

Query: 109 AXXXXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
           +        + MPE+DHRSRSRD DYGKRRRLPS+
Sbjct: 626 SSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 660


>emb|CDP13267.1| unnamed protein product [Coffea canephora]
          Length = 655

 Score =  146 bits (369), Expect = 9e-38
 Identities = 83/152 (54%), Positives = 89/152 (58%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PHAGMWTDTSMG WGGEEHG+RTR                E SHDKGVRS+AASR+KERG
Sbjct: 506 PHAGMWTDTSMG-WGGEEHGRRTRESSYGGEDNASEYGYGEASHDKGVRSSAASREKERG 564

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSG+S                               R KERD GYEDD+DRGQ   
Sbjct: 565 SERDWSGSSDRRHRDEREHDRDRYDRDHRYREEKDSYREYRHKERDPGYEDDYDRGQPSR 624

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                  V PEE HRSRSRDADYGKRRRLPS+
Sbjct: 625 SRSRSRAV-PEEHHRSRSRDADYGKRRRLPSE 655


>ref|XP_020426099.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
           persica]
 ref|XP_020426104.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
           persica]
 ref|XP_020426109.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
           persica]
 gb|ONI30252.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
 gb|ONI30253.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
 gb|ONI30254.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
 gb|ONI30255.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
 gb|ONI30256.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
 gb|ONI30257.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
          Length = 660

 Score =  146 bits (369), Expect = 9e-38
 Identities = 77/155 (49%), Positives = 89/155 (57%), Gaps = 4/155 (2%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMW D SMGGWGG+EHG+RTR                E +H+KG RSNA SR++ERGS
Sbjct: 506 HAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSRERERGS 565

Query: 277 ERDWSGNS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQ 110
           ERDWSGNS                                   RQ+ERD+GYEDDWDRGQ
Sbjct: 566 ERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQ 625

Query: 109 AXXXXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
           +        + MPE+DHRSRSRD DYGKRRRLPS+
Sbjct: 626 SSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 660


>ref|XP_021901218.1| cleavage and polyadenylation specificity factor subunit CG7185
           [Carica papaya]
          Length = 636

 Score =  145 bits (367), Expect = 2e-37
 Identities = 75/152 (49%), Positives = 88/152 (57%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PHAG+WTD SMGGWGGEEHG+RTR                E +H+KG RS+AASR+KER 
Sbjct: 485 PHAGIWTDPSMGGWGGEEHGRRTRESSYGGEDGASDYGYGEANHEKGGRSSAASREKERA 544

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSG++                               RQ+ERD  YEDDWDRGQ   
Sbjct: 545 SERDWSGSNDRRHHDERGQDWDRSEREHRYRGEKDSYHDHRQRERDSAYEDDWDRGQTSS 604

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 R MPE+DH+SRSR+ DYGKRRRLPS+
Sbjct: 605 RSRSRSRTMPEDDHKSRSREGDYGKRRRLPSE 636


>gb|KZM83603.1| hypothetical protein DCAR_031172 [Daucus carota subsp. sativus]
          Length = 610

 Score =  144 bits (364), Expect = 3e-37
 Identities = 78/152 (51%), Positives = 87/152 (57%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PH+GMW D++MGGW GEEHGQRTR                +P ++K  RSN ASR+KERG
Sbjct: 460 PHSGMWNDSNMGGWAGEEHGQRTRESSYGGEDGGSEYGYGDPGNEKSTRSNPASREKERG 519

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSGNS                               RQK+RD  Y+DD DRGQA  
Sbjct: 520 SERDWSGNSEKRHRDERDQDRDRYDREHRYREEKDDYREHRQKDRD-SYKDDGDRGQASS 578

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 RV PEEDHRSRSRDADYGKRRRLPSD
Sbjct: 579 RSRSRSRVAPEEDHRSRSRDADYGKRRRLPSD 610


>ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 [Daucus carota subsp. sativus]
          Length = 645

 Score =  144 bits (364), Expect = 4e-37
 Identities = 78/152 (51%), Positives = 87/152 (57%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PH+GMW D++MGGW GEEHGQRTR                +P ++K  RSN ASR+KERG
Sbjct: 495 PHSGMWNDSNMGGWAGEEHGQRTRESSYGGEDGGSEYGYGDPGNEKSTRSNPASREKERG 554

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSGNS                               RQK+RD  Y+DD DRGQA  
Sbjct: 555 SERDWSGNSEKRHRDERDQDRDRYDREHRYREEKDDYREHRQKDRD-SYKDDGDRGQASS 613

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 RV PEEDHRSRSRDADYGKRRRLPSD
Sbjct: 614 RSRSRSRVAPEEDHRSRSRDADYGKRRRLPSD 645


>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 isoform X2 [Vitis vinifera]
 ref|XP_010650883.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 isoform X2 [Vitis vinifera]
 ref|XP_010650886.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 isoform X2 [Vitis vinifera]
 ref|XP_019075332.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185 isoform X2 [Vitis vinifera]
          Length = 650

 Score =  144 bits (364), Expect = 4e-37
 Identities = 77/151 (50%), Positives = 86/151 (56%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMWTDTSMGGWGGEEHG+RTR                E +H+K  RSN ASR+KERGS
Sbjct: 500 HAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGS 559

Query: 277 ERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXXX 98
           ERDWSGNS                               RQ+ERD   EDDWDRGQ+   
Sbjct: 560 ERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSR 619

Query: 97  XXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                R + +EDHRSRSRD DYGKRRRLPS+
Sbjct: 620 SRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 650


>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 isoform X1 [Vitis vinifera]
          Length = 656

 Score =  144 bits (364), Expect = 5e-37
 Identities = 77/151 (50%), Positives = 86/151 (56%)
 Frame = -3

Query: 457 HAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERGS 278
           HAGMWTDTSMGGWGGEEHG+RTR                E +H+K  RSN ASR+KERGS
Sbjct: 506 HAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGS 565

Query: 277 ERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXXX 98
           ERDWSGNS                               RQ+ERD   EDDWDRGQ+   
Sbjct: 566 ERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSR 625

Query: 97  XXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                R + +EDHRSRSRD DYGKRRRLPS+
Sbjct: 626 SRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 656


>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 [Nicotiana sylvestris]
          Length = 648

 Score =  142 bits (358), Expect = 3e-36
 Identities = 77/152 (50%), Positives = 85/152 (55%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PH GMWTDTS GGWGGEEHG+RTR                E SHDKG RS+A SR+KERG
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG 556

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSGNS                               RQKER+  YEDD+DRGQ+  
Sbjct: 557 SERDWSGNSERRHRDEREHDRERYDREHRYKEERDGYRDYRQKERESEYEDDYDRGQSSS 616

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 R   EEDHRSRSRD +YGKRRR PS+
Sbjct: 617 RSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus follicularis]
          Length = 658

 Score =  141 bits (355), Expect = 8e-36
 Identities = 76/155 (49%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PHAGMWTDTSMGGWGGEEHG+RTR                E +++KG RS+ AS++KER 
Sbjct: 504 PHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEANNEKGARSSGASQEKERV 563

Query: 280 SERDWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQ 110
           SERDWSG +                                  RQ+ERD GYEDDWDRG 
Sbjct: 564 SERDWSGTTERRHREERVQDWDRSEREQREHRYREEKDSYRDHRQRERDSGYEDDWDRGH 623

Query: 109 AXXXXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
           +        R +PEE+HRSRSRDADYGKRRRLPS+
Sbjct: 624 SSSRSRSRSRAVPEEEHRSRSRDADYGKRRRLPSE 658


>ref|XP_019231531.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 [Nicotiana attenuata]
 gb|OIT28678.1| hypothetical protein A4A49_35854 [Nicotiana attenuata]
          Length = 648

 Score =  140 bits (354), Expect = 1e-35
 Identities = 76/152 (50%), Positives = 84/152 (55%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PH GMWTDTS GGWGGEEHG+RTR                E SHDKG RS+A SR+KERG
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG 556

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSGNS                               R KER+  YEDD+DRGQ+  
Sbjct: 557 SERDWSGNSEKRHRDEREHDRERYDREHRYKEERDGYRDYRHKEREAEYEDDYDRGQSSS 616

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 R   EEDHRSRSRD +YGKRRR PS+
Sbjct: 617 RSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 [Nicotiana tomentosiformis]
          Length = 648

 Score =  140 bits (354), Expect = 1e-35
 Identities = 76/152 (50%), Positives = 84/152 (55%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PH GMWTDTS GGWGGEEHG+RTR                E SHDKG RS+A SR+KERG
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG 556

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSGNS                               R KER+  YEDD+DRGQ+  
Sbjct: 557 SERDWSGNSERRHRDEREHDRERYDREHRYKEERDGYRHYRHKEREAEYEDDYDRGQSSS 616

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 R   EEDHRSRSRD +YGKRRR PS+
Sbjct: 617 RSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 [Solanum tuberosum]
 ref|XP_006341787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 [Solanum tuberosum]
 ref|XP_015161766.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 [Solanum tuberosum]
 ref|XP_015161767.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           6 [Solanum tuberosum]
          Length = 648

 Score =  140 bits (354), Expect = 1e-35
 Identities = 76/152 (50%), Positives = 85/152 (55%)
 Frame = -3

Query: 460 PHAGMWTDTSMGGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAASRDKERG 281
           PH GMWTDTS GGWGGEEHG+RTR                E SHDKG RS+A SR+KERG
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG 556

Query: 280 SERDWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKERDLGYEDDWDRGQAXX 101
           SERDWSGNS                               RQKER+  YE+D+DRGQ+  
Sbjct: 557 SERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQKERESEYEEDYDRGQSSS 616

Query: 100 XXXXXXRVMPEEDHRSRSRDADYGKRRRLPSD 5
                 R   EEDHRSRSRD +YGKRRR PS+
Sbjct: 617 RSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


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