BLASTX nr result
ID: Acanthopanax21_contig00000884
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00000884
(479 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019078590.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vi... 94 2e-19
ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vi... 94 2e-19
emb|CBI17913.3| unnamed protein product, partial [Vitis vinifera] 94 2e-19
ref|XP_018851530.1| PREDICTED: DNA ligase 4 [Juglans regia] 92 1e-18
ref|XP_015883942.1| PREDICTED: DNA ligase 4 [Ziziphus jujuba] 89 2e-17
gb|PON91014.1| DNA ligase, ATP-dependent [Trema orientalis] 84 7e-16
ref|XP_023914972.1| DNA ligase 4 [Quercus suber] 84 1e-15
gb|POF07460.1| dna ligase 4 [Quercus suber] 84 1e-15
gb|PON55992.1| Ribosomal protein [Parasponia andersonii] 82 4e-15
ref|XP_017259049.1| PREDICTED: DNA ligase 4 isoform X2 [Daucus c... 81 8e-15
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume] 77 2e-13
gb|ONI27220.1| hypothetical protein PRUPE_1G074600 [Prunus persica] 77 2e-13
ref|XP_020410772.1| DNA ligase 4 isoform X2 [Prunus persica] >gi... 77 2e-13
ref|XP_020410771.1| DNA ligase 4 isoform X1 [Prunus persica] >gi... 77 2e-13
ref|XP_017259048.1| PREDICTED: DNA ligase 4 isoform X1 [Daucus c... 77 3e-13
ref|XP_011017673.1| PREDICTED: DNA ligase 4 isoform X4 [Populus ... 75 1e-12
ref|XP_011017672.1| PREDICTED: DNA ligase 4 isoform X3 [Populus ... 75 1e-12
ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus ... 75 2e-12
ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus ... 75 2e-12
dbj|GAV59686.1| DNA_ligase_A_M domain-containing protein/DNA_lig... 74 2e-12
>ref|XP_019078590.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera]
Length = 933
Score = 94.4 bits (233), Expect = 2e-19
Identities = 51/108 (47%), Positives = 67/108 (62%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SSQRGK E++ A D+ + +W+DR L ++K E LEVMVDPVQAMLLDM
Sbjct: 826 ESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDM 885
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSLG +K EST+ ++ E+ P + SYKD+A LLKDW
Sbjct: 886 IPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 933
>ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera]
Length = 1162
Score = 94.4 bits (233), Expect = 2e-19
Identities = 51/108 (47%), Positives = 67/108 (62%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SSQRGK E++ A D+ + +W+DR L ++K E LEVMVDPVQAMLLDM
Sbjct: 1055 ESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDM 1114
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSLG +K EST+ ++ E+ P + SYKD+A LLKDW
Sbjct: 1115 IPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 1162
>emb|CBI17913.3| unnamed protein product, partial [Vitis vinifera]
Length = 1163
Score = 94.4 bits (233), Expect = 2e-19
Identities = 51/108 (47%), Positives = 67/108 (62%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SSQRGK E++ A D+ + +W+DR L ++K E LEVMVDPVQAMLLDM
Sbjct: 1056 ESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDM 1115
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSLG +K EST+ ++ E+ P + SYKD+A LLKDW
Sbjct: 1116 IPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 1163
>ref|XP_018851530.1| PREDICTED: DNA ligase 4 [Juglans regia]
Length = 1067
Score = 92.4 bits (228), Expect = 1e-18
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SS RGK EQ+ +D +W D+V L T+S++ +E+ E LEVM DPVQAMLLDM
Sbjct: 958 ESSPRGKVAEQEVEKDVGYQKWYDKVPEVGLTTTLSSQHSERSEKLEVMTDPVQAMLLDM 1017
Query: 181 IPSLG--TQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSLG + + T T + E QP D SYKD+A +LLKDW
Sbjct: 1018 IPSLGVTAARAKDTITVTDGETQPLDPNAEPKKKKKVSYKDVAGELLKDW 1067
>ref|XP_015883942.1| PREDICTED: DNA ligase 4 [Ziziphus jujuba]
Length = 1059
Score = 89.0 bits (219), Expect = 2e-17
Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SSQRGK EQ ED + EW +RV ++ N +N+K E LE+M DPV+AMLLDM
Sbjct: 948 ESSQRGKATEQ---EDVRHEEWFNRVPEIDMSEKCDNEDNKKPEKLEMMTDPVEAMLLDM 1004
Query: 181 IPSLGTQKVESTSTALESEEQPS--------DXXXXXXXXXXXSYKDIACDLLKDW 324
IPSLGT+K+E+ + + E + +PS D SYKD+A +LLKDW
Sbjct: 1005 IPSLGTKKIETANKSFE-DGKPSADMNAPSADLNVEPTKKKKVSYKDVAGELLKDW 1059
>gb|PON91014.1| DNA ligase, ATP-dependent [Trema orientalis]
Length = 1165
Score = 84.3 bits (207), Expect = 7e-16
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Frame = +1
Query: 4 SSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 183
SS R EI+Q+ E+S+ EW +++ + S +N K + LEVM DPV AMLLDMI
Sbjct: 1057 SSVRHNEIKQEGEENSRHEEWFNKLPEIQMTEKYSWEKN-KQDKLEVMTDPVHAMLLDMI 1115
Query: 184 PSLGTQKVESTSTALESEEQPSD---XXXXXXXXXXXSYKDIACDLLKDW 324
PSLG QK ++ +T +E E+ P D SYKD+A +LLKDW
Sbjct: 1116 PSLGKQKTDTANTRIEDEKPPMDVNAAEPSAPKKKKVSYKDVASELLKDW 1165
>ref|XP_023914972.1| DNA ligase 4 [Quercus suber]
Length = 1159
Score = 83.6 bits (205), Expect = 1e-15
Identities = 48/108 (44%), Positives = 66/108 (61%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SS RGK E++ +D + E+ + V L T +++E+ E EVM+DPVQAMLLDM
Sbjct: 1053 ESSYRGKAAEEEVEKDVRYEEY-NIVPNIELIETHRIQDSERPEKFEVMIDPVQAMLLDM 1111
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
PSLG +K+E+T T LE E+ D SYKD+A +LLKDW
Sbjct: 1112 FPSLGVKKIETTDTILEDEKLLLDPNTEPTKKKKVSYKDVAGELLKDW 1159
>gb|POF07460.1| dna ligase 4 [Quercus suber]
Length = 1159
Score = 83.6 bits (205), Expect = 1e-15
Identities = 48/108 (44%), Positives = 66/108 (61%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SS RGK E++ +D + E+ + V L T +++E+ E EVM+DPVQAMLLDM
Sbjct: 1053 ESSYRGKAAEEEVEKDVRYEEY-NIVPNIELIETHRIQDSERPEKFEVMIDPVQAMLLDM 1111
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
PSLG +K+E+T T LE E+ D SYKD+A +LLKDW
Sbjct: 1112 FPSLGVKKIETTDTILEDEKLLLDPNTEPTKKKKVSYKDVAGELLKDW 1159
>gb|PON55992.1| Ribosomal protein [Parasponia andersonii]
Length = 758
Score = 82.0 bits (201), Expect = 4e-15
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = +1
Query: 4 SSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMI 183
SS R EI+++ E+S+ GEW + + S +N K LEVM PV AMLLDMI
Sbjct: 650 SSVRHNEIKREGEENSRHGEWFNEPPEIQMMEKYSGEKN-KQHKLEVMTGPVNAMLLDMI 708
Query: 184 PSLGTQKVESTSTALESEEQPSD---XXXXXXXXXXXSYKDIACDLLKDW 324
PSLG QK ++T+T +E ++ P D SYKD+A +LLKDW
Sbjct: 709 PSLGKQKTDTTNTRIEDDKPPVDVNAAEPSAPRKKKVSYKDVASELLKDW 758
>ref|XP_017259049.1| PREDICTED: DNA ligase 4 isoform X2 [Daucus carota subsp. sativus]
Length = 1179
Score = 81.3 bits (199), Expect = 8e-15
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 20/127 (15%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SSQRG IE + E +++ +W+D +HGT + S NE E LEVMVDPVQ++LLDM
Sbjct: 1054 ESSQRGNVIENMDIEGTERSKWVDTLHGTGMEERKSIGSNEP-EKLEVMVDPVQSLLLDM 1112
Query: 181 IPSLGTQK---VES-----------------TSTALESEEQPSDXXXXXXXXXXXSYKDI 300
IPSLGTQ ES T+ ES+ QPS+ SYKD+
Sbjct: 1113 IPSLGTQTNAVTESKPQPQTNAVTESKPQPQTNAVTESKPQPSEPNQVPTKKKKVSYKDL 1172
Query: 301 ACDLLKD 321
A +LL D
Sbjct: 1173 AYNLLGD 1179
>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
Length = 1130
Score = 77.4 bits (189), Expect = 2e-13
Identities = 44/108 (40%), Positives = 62/108 (57%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+S QR Q+ AED + + ++ + + ++ K E LEVM DPVQAML DM
Sbjct: 1023 ESLQRDNAAVQEVAEDIRFEDHSYQIPDVKMIEKCNIEDSGKPEKLEVMADPVQAMLFDM 1082
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSL +KVE+T+T++E E+ D SYKD+A +LLKDW
Sbjct: 1083 IPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 1130
>gb|ONI27220.1| hypothetical protein PRUPE_1G074600 [Prunus persica]
Length = 835
Score = 77.0 bits (188), Expect = 2e-13
Identities = 44/108 (40%), Positives = 61/108 (56%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+S QR Q+ AED + ++ + + ++ K E LEVM DPVQAML DM
Sbjct: 728 ESLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKCNIEDSGKPEKLEVMADPVQAMLFDM 787
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSL +KVE+T+T++E E+ D SYKD+A +LLKDW
Sbjct: 788 IPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 835
>ref|XP_020410772.1| DNA ligase 4 isoform X2 [Prunus persica]
ref|XP_020410773.1| DNA ligase 4 isoform X2 [Prunus persica]
Length = 934
Score = 77.0 bits (188), Expect = 2e-13
Identities = 44/108 (40%), Positives = 61/108 (56%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+S QR Q+ AED + ++ + + ++ K E LEVM DPVQAML DM
Sbjct: 827 ESLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKCNIEDSGKPEKLEVMADPVQAMLFDM 886
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSL +KVE+T+T++E E+ D SYKD+A +LLKDW
Sbjct: 887 IPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 934
>ref|XP_020410771.1| DNA ligase 4 isoform X1 [Prunus persica]
gb|ONI27219.1| hypothetical protein PRUPE_1G074600 [Prunus persica]
Length = 1163
Score = 77.0 bits (188), Expect = 2e-13
Identities = 44/108 (40%), Positives = 61/108 (56%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+S QR Q+ AED + ++ + + ++ K E LEVM DPVQAML DM
Sbjct: 1056 ESLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKCNIEDSGKPEKLEVMADPVQAMLFDM 1115
Query: 181 IPSLGTQKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
IPSL +KVE+T+T++E E+ D SYKD+A +LLKDW
Sbjct: 1116 IPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKDW 1163
>ref|XP_017259048.1| PREDICTED: DNA ligase 4 isoform X1 [Daucus carota subsp. sativus]
Length = 1191
Score = 76.6 bits (187), Expect = 3e-13
Identities = 53/139 (38%), Positives = 69/139 (49%), Gaps = 32/139 (23%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SSQRG IE + E +++ +W+D +HGT + S NE E LEVMVDPVQ++LLDM
Sbjct: 1054 ESSQRGNVIENMDIEGTERSKWVDTLHGTGMEERKSIGSNEP-EKLEVMVDPVQSLLLDM 1112
Query: 181 IPSLGTQK---VES-----------------------------TSTALESEEQPSDXXXX 264
IPSLGTQ ES T+ ES+ QPS+
Sbjct: 1113 IPSLGTQTNAVTESKPQPQTNAVTESKPQPQTNAVTESKPQPQTNAVTESKPQPSEPNQV 1172
Query: 265 XXXXXXXSYKDIACDLLKD 321
SYKD+A +LL D
Sbjct: 1173 PTKKKKVSYKDLAYNLLGD 1191
>ref|XP_011017673.1| PREDICTED: DNA ligase 4 isoform X4 [Populus euphratica]
Length = 1081
Score = 74.7 bits (182), Expect = 1e-12
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SS+RGK E+ AE+++ EW+D+ G + N+ EK E LEVMVDPV A+L+DM
Sbjct: 950 ESSRRGKAKEE-TAEENRDEEWLDKAPGVEMRERYYNQVTEKPEKLEVMVDPVHAILMDM 1008
Query: 181 IPSLGTQKVESTSTALESEEQ 243
IPSLG +K E+T+ +++E+Q
Sbjct: 1009 IPSLGMKKGETTNPTIDNEKQ 1029
>ref|XP_011017672.1| PREDICTED: DNA ligase 4 isoform X3 [Populus euphratica]
Length = 1085
Score = 74.7 bits (182), Expect = 1e-12
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SS+RGK E+ AE+++ EW+D+ G + N+ EK E LEVMVDPV A+L+DM
Sbjct: 954 ESSRRGKAKEE-TAEENRDEEWLDKAPGVEMRERYYNQVTEKPEKLEVMVDPVHAILMDM 1012
Query: 181 IPSLGTQKVESTSTALESEEQ 243
IPSLG +K E+T+ +++E+Q
Sbjct: 1013 IPSLGMKKGETTNPTIDNEKQ 1033
>ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus euphratica]
Length = 1197
Score = 74.7 bits (182), Expect = 2e-12
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SS+RGK E+ AE+++ EW+D+ G + N+ EK E LEVMVDPV A+L+DM
Sbjct: 1066 ESSRRGKAKEE-TAEENRDEEWLDKAPGVEMRERYYNQVTEKPEKLEVMVDPVHAILMDM 1124
Query: 181 IPSLGTQKVESTSTALESEEQ 243
IPSLG +K E+T+ +++E+Q
Sbjct: 1125 IPSLGMKKGETTNPTIDNEKQ 1145
>ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus euphratica]
Length = 1319
Score = 74.7 bits (182), Expect = 2e-12
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 1 DSSQRGKEIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDM 180
+SS+RGK E+ AE+++ EW+D+ G + N+ EK E LEVMVDPV A+L+DM
Sbjct: 1188 ESSRRGKAKEE-TAEENRDEEWLDKAPGVEMRERYYNQVTEKPEKLEVMVDPVHAILMDM 1246
Query: 181 IPSLGTQKVESTSTALESEEQ 243
IPSLG +K E+T+ +++E+Q
Sbjct: 1247 IPSLGMKKGETTNPTIDNEKQ 1267
>dbj|GAV59686.1| DNA_ligase_A_M domain-containing protein/DNA_ligase_A_N
domain-containing protein/DNA_ligase_A_C
domain-containing protein/PTCB-BRCT domain-containing
protein [Cephalotus follicularis]
Length = 1159
Score = 74.3 bits (181), Expect = 2e-12
Identities = 49/116 (42%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Frame = +1
Query: 22 EIEQKNAEDSKQGEWIDRVHGTCLAGTISNRENEKLEMLEVMVDPVQAMLLDMIPSLGT- 198
+ E + E S I+ +A + ENEK E LEVMVDPVQAMLLDMIPSLG
Sbjct: 1050 QTEMRREESSNNAPEIE------MAESRYGHENEKHEKLEVMVDPVQAMLLDMIPSLGNK 1103
Query: 199 --------------QKVESTSTALESEEQPSDXXXXXXXXXXXSYKDIACDLLKDW 324
+KVEST+ E+E+ PSD SYKDI +LKDW
Sbjct: 1104 KFETKNPITPSLGIEKVESTNPTPENEKPPSDSSSEPVKKKKVSYKDIVGVMLKDW 1159