BLASTX nr result
ID: Acanthopanax21_contig00000737
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00000737
(587 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020419876.1| DNA repair helicase XPB1 [Prunus persica] >g... 93 2e-18
ref|XP_008238934.1| PREDICTED: DNA repair helicase XPB1 [Prunus ... 93 2e-18
ref|XP_021820838.1| DNA repair helicase XPB1 [Prunus avium] 92 3e-18
gb|KZN04729.1| hypothetical protein DCAR_005566 [Daucus carota s... 91 7e-18
ref|XP_017235722.1| PREDICTED: DNA repair helicase XPB1 [Daucus ... 91 7e-18
ref|XP_016500687.1| PREDICTED: DNA repair helicase XPB1-like [Ni... 86 2e-16
ref|XP_001774482.1| predicted protein [Physcomitrella patens] >g... 87 3e-16
ref|XP_009375027.1| PREDICTED: DNA repair helicase XPB1 [Pyrus x... 87 3e-16
ref|XP_018623264.1| PREDICTED: DNA repair helicase XPB1 [Nicotia... 86 4e-16
ref|XP_018633737.1| PREDICTED: DNA repair helicase XPB1-like [Ni... 86 4e-16
ref|XP_016498300.1| PREDICTED: DNA repair helicase XPB1-like [Ni... 86 4e-16
ref|XP_016476264.1| PREDICTED: DNA repair helicase XPB1 [Nicotia... 86 4e-16
ref|XP_009790427.1| PREDICTED: DNA repair helicase XPB1 [Nicotia... 86 4e-16
ref|XP_019151628.1| PREDICTED: DNA repair helicase XPB1 isoform ... 86 7e-16
ref|XP_019151627.1| PREDICTED: DNA repair helicase XPB1 isoform ... 86 7e-16
ref|XP_019151624.1| PREDICTED: DNA repair helicase XPB1 isoform ... 86 7e-16
gb|PIN02997.1| RNA polymerase II transcription initiation [Handr... 85 1e-15
ref|XP_019267166.1| PREDICTED: DNA repair helicase XPB1 [Nicotia... 85 1e-15
ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea... 79 2e-15
ref|XP_016196681.1| DNA repair helicase XPB1 [Arachis ipaensis] 84 2e-15
>ref|XP_020419876.1| DNA repair helicase XPB1 [Prunus persica]
gb|ONI07171.1| hypothetical protein PRUPE_5G104000 [Prunus persica]
Length = 766
Score = 93.2 bits (230), Expect = 2e-18
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVITGLPPPD GPELNY+ LDDQ LLTK
Sbjct: 640 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDSGPELNYHSLDDQLALLTK 688
>ref|XP_008238934.1| PREDICTED: DNA repair helicase XPB1 [Prunus mume]
Length = 766
Score = 93.2 bits (230), Expect = 2e-18
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVITGLPPPD GPELNY+ LDDQ LLTK
Sbjct: 640 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDSGPELNYHSLDDQLALLTK 688
>ref|XP_021820838.1| DNA repair helicase XPB1 [Prunus avium]
Length = 766
Score = 92.4 bits (228), Expect = 3e-18
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVITGLPPPD GPELNY+ LDDQ LLTK
Sbjct: 640 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDSGPELNYHRLDDQLALLTK 688
>gb|KZN04729.1| hypothetical protein DCAR_005566 [Daucus carota subsp. sativus]
Length = 714
Score = 91.3 bits (225), Expect = 7e-18
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVITGLPPPD G EL+Y LD+QNKLLTK
Sbjct: 615 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDTGAELSYYSLDEQNKLLTK 663
>ref|XP_017235722.1| PREDICTED: DNA repair helicase XPB1 [Daucus carota subsp. sativus]
Length = 756
Score = 91.3 bits (225), Expect = 7e-18
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVITGLPPPD G EL+Y LD+QNKLLTK
Sbjct: 633 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDTGAELSYYSLDEQNKLLTK 681
>ref|XP_016500687.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
ref|XP_016500745.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
Length = 351
Score = 86.3 bits (212), Expect = 2e-16
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ +LL K
Sbjct: 227 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSYHRLDDQLQLLGK 275
>ref|XP_001774482.1| predicted protein [Physcomitrella patens]
gb|PNR52540.1| hypothetical protein PHYPA_008914 [Physcomitrella patens]
Length = 734
Score = 86.7 bits (213), Expect = 3e-16
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPP D GPEL+Y+ LDDQ LLTK
Sbjct: 610 QEMYYSTKRQQFLIDQGYSFKVITSLPPADSGPELSYHSLDDQMNLLTK 658
>ref|XP_009375027.1| PREDICTED: DNA repair helicase XPB1 [Pyrus x bretschneideri]
ref|XP_009375030.1| PREDICTED: DNA repair helicase XPB1 [Pyrus x bretschneideri]
Length = 767
Score = 86.7 bits (213), Expect = 3e-16
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFK+IT LPPPD GPELNY+ L+DQ LL+K
Sbjct: 641 QEMYYSTKRQQFLIDQGYSFKIITSLPPPDSGPELNYHHLNDQLSLLSK 689
>ref|XP_018623264.1| PREDICTED: DNA repair helicase XPB1 [Nicotiana tomentosiformis]
ref|XP_009589972.2| PREDICTED: DNA repair helicase XPB1 [Nicotiana tomentosiformis]
Length = 511
Score = 86.3 bits (212), Expect = 4e-16
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ +LL K
Sbjct: 387 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSYHRLDDQLQLLGK 435
>ref|XP_018633737.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana
tomentosiformis]
Length = 762
Score = 86.3 bits (212), Expect = 4e-16
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ +LL K
Sbjct: 638 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSYHRLDDQLQLLGK 686
>ref|XP_016498300.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
Length = 769
Score = 86.3 bits (212), Expect = 4e-16
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ +LL K
Sbjct: 645 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSYHRLDDQLQLLGK 693
>ref|XP_016476264.1| PREDICTED: DNA repair helicase XPB1 [Nicotiana tabacum]
Length = 769
Score = 86.3 bits (212), Expect = 4e-16
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ +LL K
Sbjct: 645 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSYHRLDDQLQLLGK 693
>ref|XP_009790427.1| PREDICTED: DNA repair helicase XPB1 [Nicotiana sylvestris]
ref|XP_009790428.1| PREDICTED: DNA repair helicase XPB1 [Nicotiana sylvestris]
Length = 769
Score = 86.3 bits (212), Expect = 4e-16
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ +LL K
Sbjct: 645 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSYHRLDDQLQLLGK 693
>ref|XP_019151628.1| PREDICTED: DNA repair helicase XPB1 isoform X3 [Ipomoea nil]
Length = 720
Score = 85.5 bits (210), Expect = 7e-16
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ LL K
Sbjct: 594 QEMYYSTKRQQFLIDQGYSFKVITNLPPPDSGPELSYHHLDDQLALLGK 642
>ref|XP_019151627.1| PREDICTED: DNA repair helicase XPB1 isoform X2 [Ipomoea nil]
Length = 764
Score = 85.5 bits (210), Expect = 7e-16
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ LL K
Sbjct: 638 QEMYYSTKRQQFLIDQGYSFKVITNLPPPDSGPELSYHHLDDQLALLGK 686
>ref|XP_019151624.1| PREDICTED: DNA repair helicase XPB1 isoform X1 [Ipomoea nil]
ref|XP_019151625.1| PREDICTED: DNA repair helicase XPB1 isoform X1 [Ipomoea nil]
Length = 765
Score = 85.5 bits (210), Expect = 7e-16
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LDDQ LL K
Sbjct: 639 QEMYYSTKRQQFLIDQGYSFKVITNLPPPDSGPELSYHHLDDQLALLGK 687
>gb|PIN02997.1| RNA polymerase II transcription initiation [Handroanthus
impetiginosus]
Length = 627
Score = 85.1 bits (209), Expect = 1e-15
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVITGLPPPD GPEL+Y L+DQ LL K
Sbjct: 502 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDSGPELSYYRLEDQLALLGK 550
>ref|XP_019267166.1| PREDICTED: DNA repair helicase XPB1 [Nicotiana attenuata]
gb|OIT34566.1| dna repair helicase xpb1 [Nicotiana attenuata]
Length = 769
Score = 84.7 bits (208), Expect = 1e-15
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GPEL+Y+ LD+Q +LL K
Sbjct: 645 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGPELSYHRLDEQLQLLGK 693
>ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea var. sylvestris]
Length = 124
Score = 79.0 bits (193), Expect = 2e-15
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = -1
Query: 419 MYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
MYYSTKRQQFLIDQGYSFKVITGLPPPD G LNY+ LD+Q LL K
Sbjct: 1 MYYSTKRQQFLIDQGYSFKVITGLPPPDSGATLNYSRLDEQLALLGK 47
>ref|XP_016196681.1| DNA repair helicase XPB1 [Arachis ipaensis]
Length = 765
Score = 84.3 bits (207), Expect = 2e-15
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = -1
Query: 425 QEMYYSTKRQQFLIDQGYSFKVITGLPPPDFGPELNYNGLDDQNKLLTK 279
QEMYYSTKRQQFLIDQGYSFKVIT LPPPD GP L+Y+ LDDQ LL+K
Sbjct: 642 QEMYYSTKRQQFLIDQGYSFKVITSLPPPDEGPRLSYHHLDDQLALLSK 690