BLASTX nr result

ID: Acanthopanax21_contig00000678 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00000678
         (482 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX58099.1| sec-independent translocase protein TATA chloropl...    53   2e-06
gb|EOY23268.1| Bacterial sec-independent translocation protein m...    55   8e-06

>gb|PNX58099.1| sec-independent translocase protein TATA chloroplastic-like,
           partial [Trifolium pratense]
          Length = 72

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 29/59 (49%), Positives = 35/59 (59%)
 Frame = +1

Query: 1   AYSSEDYLKITEEQLKAAVTQQQMQTASLGETQTKSQDTXXXXXXXXXXXXXQKPKSET 177
           AYSSEDYLKITEEQLKAA  QQQ+QT    E + + +               QKP+SE+
Sbjct: 9   AYSSEDYLKITEEQLKAAAAQQQVQTPPPKEAEIEQEVQPPVNETAATLPPPQKPESES 67


>gb|EOY23268.1| Bacterial sec-independent translocation protein mttA/Hcf106,
           putative isoform 1 [Theobroma cacao]
          Length = 263

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   AYSSEDYLKITEEQLKAAVTQQQMQTASLGETQTKSQD--TXXXXXXXXXXXXXQKPKSE 174
           AY+SE+YLK+TEEQLKA+ +QQQ QTAS  E+Q +SQ+                QKP+SE
Sbjct: 203 AYTSEEYLKVTEEQLKASASQQQDQTASPAESQLESQNQQEATAKETASAMPPSQKPESE 262

Query: 175 T 177
           T
Sbjct: 263 T 263


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