BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00000479
         (1361 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punic...   308   2e-95
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   270   4e-84
gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]       263   5e-81
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   256   1e-80
gb|PNX78635.1| hypothetical protein L195_g034613, partial [Trifo...   260   4e-80
gb|PNY00673.1| retrovirus-related Pol polyprotein from transposo...   257   9e-80
gb|KYP72819.1| Retrovirus-related Pol polyprotein from transposo...   247   2e-78
dbj|GAU46175.1| hypothetical protein TSUD_93620 [Trifolium subte...   253   4e-78
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]   265   6e-78
gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposo...   255   1e-77
gb|OMO97681.1| Reverse transcriptase, RNA-dependent DNA polymera...   259   2e-77
gb|OMO50520.1| Reverse transcriptase, RNA-dependent DNA polymera...   260   4e-77
ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807...   256   7e-77
gb|PKA62506.1| Retrovirus-related Pol polyprotein from transposo...   254   7e-77
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   248   9e-77
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   247   1e-76
gb|PNY14327.1| retrovirus-related Pol polyprotein from transposo...   252   7e-76
gb|PNX72737.1| retrovirus-related Pol polyprotein from transposo...   250   1e-75
ref|XP_012075349.1| uncharacterized protein LOC105636635 [Jatrop...   253   3e-75
gb|PNX95113.1| copia-type polyprotein [Trifolium pratense]            250   4e-75

>gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punica granatum]
          Length = 584

 Score =  308 bits (789), Expect = 2e-95
 Identities = 145/215 (67%), Positives = 174/215 (80%)
 Frame = -1

Query: 860 TTADSLDSPSQAQPPHYALADPPTSQDWPQPLPTRTHSMTTRSQNNIFKPKQLHHTTKHQ 681
           +T+ S +  S+  PP  + +  P S   P P P+R H M TRS+NNIFKPKQLH TTKH 
Sbjct: 48  STSSSSNIDSEVSPPILSPSPAPPSLPPPPPHPSRPHPMITRSKNNIFKPKQLHLTTKHP 107

Query: 680 LPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKRRP 501
           LP SLEP+  +QAL+D +WR AM+EEF ALV+N+TW LVPA   QN++GCKWVFRIKR  
Sbjct: 108 LPESLEPTCVSQALRDSKWRLAMSEEFNALVKNHTWDLVPASKRQNIIGCKWVFRIKRNA 167

Query: 500 DGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENNAF 321
           DGSI+RYK RLVAKGFHQRPGLDYTETFSPV+KPTTIRVVL LA+S+GWPIRQLD +NAF
Sbjct: 168 DGSINRYKARLVAKGFHQRPGLDYTETFSPVIKPTTIRVVLSLAVSSGWPIRQLDVSNAF 227

Query: 320 PHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            HG+++EEVYM QPPGFVD+N+P HVC+LRK +YG
Sbjct: 228 LHGSIDEEVYMVQPPGFVDSNHPTHVCRLRKALYG 262



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLIFSL 35
           ++PRAWY+  + FL+ YGF  S+SD SLF+F +    IYFLV VDDLL+TG  S+ +  L
Sbjct: 265 QAPRAWYRALKNFLMDYGFMTSKSDASLFVFTSGNTWIYFLVYVDDLLVTGNDSTAVQQL 324

Query: 34  VS 29
           ++
Sbjct: 325 IN 326


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  270 bits (689), Expect(2) = 4e-84
 Identities = 142/249 (57%), Positives = 160/249 (64%), Gaps = 26/249 (10%)
 Frame = -1

Query: 884  SHAQSQPLTTADSLDSPSQAQPPHYALA--------------------DPPTSQDWPQPL 765
            S   S P TTA +  S   A PP Y L+                     PPT      PL
Sbjct: 798  SPTSSSPPTTASAPLSACDA-PPRYDLSLSSLPVSFDSSNISSPSLSLSPPTQPQGSNPL 856

Query: 764  PTRTHSMTTRSQNNIFKPKQL------HHTTKHQLPASLEPSNSTQALKDPQWRAAMAEE 603
            P  +H + TRSQNNI  PKQ        H TKH LP SLEP+ ++QALKDP+W A M +E
Sbjct: 857  PEPSHRIVTRSQNNIHCPKQFPDFKTSFHVTKHPLPXSLEPTTASQALKDPKWCAXMDDE 916

Query: 602  FTALVRNNTWQLVPAVPNQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTE 423
              AL RN TW LVP   N N+VGCKWVFRIKR PDGSI RYK RLVAKGFHQRPG+DY +
Sbjct: 917  LAALARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDGSISRYKARLVAKGFHQRPGVDYHD 976

Query: 422  TFSPVVKPTTIRVVLKLALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHV 243
            TFSPVVKPTTIRVVL +ALSN W I QLD NN F HGTL E+VYM QPPG+VD   P HV
Sbjct: 977  TFSPVVKPTTIRVVLSIALSNXWXISQLDVNNXFLHGTLTEDVYMAQPPGYVDQANPTHV 1036

Query: 242  CKLRKEIYG 216
            C+L+K +YG
Sbjct: 1037 CRLQKALYG 1045



 Score = 72.8 bits (177), Expect(2) = 4e-84
 Identities = 34/57 (59%), Positives = 40/57 (70%)
 Frame = -2

Query: 214  ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
            ++PRAWY E R FLL +GF NS+ DTSLFI+      IYFLV VDDLL+TG  S  I
Sbjct: 1048 QAPRAWYMELRTFLLTFGFINSKXDTSLFIYQXRSATIYFLVYVDDLLVTGNCSQSI 1104


>gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1192

 Score =  263 bits (672), Expect(2) = 5e-81
 Identities = 127/192 (66%), Positives = 146/192 (76%)
 Frame = -1

Query: 791  TSQDWPQPLPTRTHSMTTRSQNNIFKPKQLHHTTKHQLPASLEPSNSTQALKDPQWRAAM 612
            T Q    P  TRTHSM TRSQNNIFKPKQ +  +KH LP   EPS  +QA+K  +WR AM
Sbjct: 685  TQQTQTLPQTTRTHSMVTRSQNNIFKPKQAYIVSKHTLPEPTEPSCVSQAIKKSEWREAM 744

Query: 611  AEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLD 432
              +F ALV+N TW LVP    QNVVG KWV+RIKR+P GSIDR+K RLVAKGFHQRPGLD
Sbjct: 745  TVKFNALVKNRTWTLVPPCTGQNVVGNKWVYRIKRKPHGSIDRFKARLVAKGFHQRPGLD 804

Query: 431  YTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYP 252
            +TETFS V+KPTTIR VL +ALS+GW ++QLD NNAF  GTL +EVYM QPPGF D ++P
Sbjct: 805  FTETFSTVIKPTTIRTVLCIALSSGWSLKQLDVNNAFLQGTLTDEVYMAQPPGFEDKDHP 864

Query: 251  RHVCKLRKEIYG 216
             HVCKL K IYG
Sbjct: 865  SHVCKLHKAIYG 876



 Score = 68.9 bits (167), Expect(2) = 5e-81
 Identities = 29/57 (50%), Positives = 42/57 (73%)
 Frame = -2

Query: 214  ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
            ++PRAWY+E   FLL YGF NS +D SLF++ +  + IYFLV VDDL++TG +  ++
Sbjct: 879  QAPRAWYQELSTFLLQYGFINSTADASLFVYKSGSDVIYFLVYVDDLIVTGNNQHVV 935


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  256 bits (653), Expect(2) = 1e-80
 Identities = 131/235 (55%), Positives = 157/235 (66%), Gaps = 1/235 (0%)
 Frame = -1

Query: 917  FTCRCFL*LKGSHAQSQPLTTADSLDSPSQAQPPHYALADPPTSQDWPQPLPTRTHSMTT 738
            F C C+  L+   +        DS   PS  QP H+                   HSM T
Sbjct: 589  FGCLCYPWLRPYSSHK-----LDSSSKPSTTQPDHHTT--------------NSNHSMQT 629

Query: 737  RSQNNIFKPKQ-LHHTTKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVP 561
            R++NNI KP Q L+   +   P  LEP+  TQALKDP+WR AM+EE+ ALVRN TW+LVP
Sbjct: 630  RAKNNIRKPIQKLNLHIQLSKPLDLEPTTPTQALKDPKWRKAMSEEYDALVRNGTWELVP 689

Query: 560  AVPNQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVV 381
            + P+QNVVGCKW+FR KR  DGSIDR+K RLVAKGFHQRP +DY +TFSPVVKPTTI +V
Sbjct: 690  SNPSQNVVGCKWIFRTKRNSDGSIDRFKARLVAKGFHQRPDIDYYDTFSPVVKPTTIMLV 749

Query: 380  LKLALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            L +A+SNGW +RQLD NN F  GTL E VYM QPPGF+D + P HVCKL+K IYG
Sbjct: 750  LSVAVSNGWILRQLDVNNVFLQGTLTEHVYMTQPPGFIDQDSPSHVCKLKKAIYG 804



 Score = 75.1 bits (183), Expect(2) = 1e-80
 Identities = 33/57 (57%), Positives = 43/57 (75%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++PRAWY+E R+FLL +GFTNS +DTSLF+    G  +YFLV VDDL+ITG    L+
Sbjct: 807 QAPRAWYQELRSFLLQFGFTNSHADTSLFVLKFRGHLVYFLVYVDDLIITGDDEHLV 863


>gb|PNX78635.1| hypothetical protein L195_g034613, partial [Trifolium pratense]
          Length = 331

 Score =  260 bits (665), Expect = 4e-80
 Identities = 129/235 (54%), Positives = 162/235 (68%), Gaps = 1/235 (0%)
 Frame = -1

Query: 860 TTADSLDSPSQAQPPHYALADPPTSQDWPQP-LPTRTHSMTTRSQNNIFKPKQLHHTTKH 684
           T++D+ D   Q+ PP             P P L   THS  TR  N IFKPKQL   TK+
Sbjct: 43  TSSDTHDLAVQSPPP-------------PNPKLIVPTHSRNTRGMNGIFKPKQLFSVTKY 89

Query: 683 QLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKRR 504
            +P S+EP+  TQAL+  +W+ AM++EFTAL++N TW LVP   N N++GCKWVFRIKR 
Sbjct: 90  PIPPSVEPTCVTQALQHVEWKQAMSDEFTALMKNGTWSLVPPQSNYNIIGCKWVFRIKRN 149

Query: 503 PDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENNA 324
           PDGSI RYK RLVAKGFHQRPG+D+ +TFSPV+KP TI++VL +ALS GW I Q+D NNA
Sbjct: 150 PDGSIARYKARLVAKGFHQRPGIDFKDTFSPVIKPQTIKMVLCIALSKGWIISQMDVNNA 209

Query: 323 FPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYGRVSPCLVQGIPRIPSWLWI 159
           F HGT+ E+VYM QP GFV  N+P HVCKL K +YG      ++  PR  +WLW+
Sbjct: 210 FLHGTISEDVYMSQPAGFVHQNFPTHVCKLHKALYG------LKQAPR--AWLWL 256


>gb|PNY00673.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 933

 Score =  257 bits (657), Expect(2) = 9e-80
 Identities = 124/210 (59%), Positives = 156/210 (74%), Gaps = 1/210 (0%)
 Frame = -1

Query: 842 DSPSQAQPPHYALADPPTSQDWPQPLPTRT-HSMTTRSQNNIFKPKQLHHTTKHQLPASL 666
           + PS + P H  L+   +  + P P P  + HSM TRS+N IFKPK+L   TK+ LP S 
Sbjct: 355 EPPSHSTPEH-TLSTVQSVVEVPPPTPRPSGHSMATRSKNGIFKPKKLFLATKYPLPPST 413

Query: 665 EPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKRRPDGSID 486
           EP+  +QAL+  +W+ AM++EFTAL+ N TW LVP  P+ NV+G KWVFRIKR PDGSI 
Sbjct: 414 EPTCVSQALQHAEWKQAMSDEFTALMNNGTWSLVPHHPHLNVIGNKWVFRIKRNPDGSIA 473

Query: 485 RYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENNAFPHGTL 306
           RYK RLVAKGFHQRPG+DY +TFSPV+KP TI++VL ++LS GW + Q+D NNAF +GTL
Sbjct: 474 RYKARLVAKGFHQRPGIDYKDTFSPVIKPQTIKMVLCISLSKGWDLMQMDVNNAFLNGTL 533

Query: 305 EEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            EEVYM QPPGFV ++YP HVCKL K +YG
Sbjct: 534 NEEVYMSQPPGFVHSSYPNHVCKLHKSLYG 563



 Score = 70.5 bits (171), Expect(2) = 9e-80
 Identities = 31/57 (54%), Positives = 42/57 (73%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++PRAWY    +F++ YGF  S+SD SLFI++ +G   YFLV VDDLL+TG SSS +
Sbjct: 566 QAPRAWYNALHSFVVTYGFFKSKSDPSLFIYHKDGIMAYFLVYVDDLLLTGNSSSFL 622


>gb|KYP72819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 814

 Score =  247 bits (630), Expect(2) = 2e-78
 Identities = 121/219 (55%), Positives = 151/219 (68%), Gaps = 7/219 (3%)
 Frame = -1

Query: 851  DSLDSPSQAQPPHYALADPPT-------SQDWPQPLPTRTHSMTTRSQNNIFKPKQLHHT 693
            DS  + + A P H    D          S   P P+P  +H M TR +N IFKPKQ+H  
Sbjct: 471  DSSTTTASATPSHDLYTDSSIPSVAAEPSPVVPDPVPISSHPMITRPKNGIFKPKQVHLA 530

Query: 692  TKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRI 513
            TK  LP  +EPS  TQALK  +W++AM+EEF AL+ N TW LVP   + NV+G KWVFRI
Sbjct: 531  TKFPLPDPIEPSCYTQALKHQEWKSAMSEEFNALIANGTWSLVPRESHFNVIGNKWVFRI 590

Query: 512  KRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDE 333
            K++ DGS+ RYK RLVAKGFHQRPGL+YT+TFSPVVKP TI++VL +ALS GW ++Q+D 
Sbjct: 591  KQKTDGSVARYKDRLVAKGFHQRPGLNYTDTFSPVVKPQTIKLVLCIALSRGWALQQMDV 650

Query: 332  NNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            NNAF H T+ E++YM QP GFV  + P HVCKL K +YG
Sbjct: 651  NNAFLHDTILEDLYMSQPSGFVHPHLPHHVCKLHKSLYG 689



 Score = 76.6 bits (187), Expect(2) = 2e-78
 Identities = 33/57 (57%), Positives = 43/57 (75%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++PRAWY   R FLL +GFTNS+SDTSLFI+++ G   YFLV VDDLL+TG +   +
Sbjct: 692 QAPRAWYNALRGFLLAFGFTNSKSDTSLFIYHDHGVTAYFLVYVDDLLLTGNNKQFL 748


>dbj|GAU46175.1| hypothetical protein TSUD_93620 [Trifolium subterraneum]
          Length = 683

 Score =  253 bits (647), Expect(2) = 4e-78
 Identities = 123/210 (58%), Positives = 154/210 (73%), Gaps = 1/210 (0%)
 Frame = -1

Query: 842  DSPSQAQPPHYALADPPTSQDWPQPLPTRT-HSMTTRSQNNIFKPKQLHHTTKHQLPASL 666
            + PS + P H  L+   +  + P P P  + HSM TR +N I KPK+L   TK+ LP S 
Sbjct: 383  EPPSYSTPEH-TLSTVQSVIEVPPPTPRPSGHSMATRGKNGIVKPKKLFLATKYPLPPST 441

Query: 665  EPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKRRPDGSID 486
            EP+  +QAL+  +W+ AM++EFTAL+ N TW LVP  P+ NV+G KWVFRIKR PDGSI 
Sbjct: 442  EPTCVSQALQHVEWKQAMSDEFTALMNNGTWSLVPHQPHLNVIGNKWVFRIKRNPDGSIA 501

Query: 485  RYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENNAFPHGTL 306
            RYK RLVAKGFHQRPG+DY +TFSPV+KP TI++VL +ALS GW + Q+D NNAF +GTL
Sbjct: 502  RYKARLVAKGFHQRPGIDYKDTFSPVIKPQTIKMVLCIALSKGWDLMQMDVNNAFLNGTL 561

Query: 305  EEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
             EEVYM QPPGFV ++YP HVCKL K +YG
Sbjct: 562  NEEVYMSQPPGFVHSSYPNHVCKLHKSLYG 591



 Score = 68.9 bits (167), Expect(2) = 4e-78
 Identities = 30/57 (52%), Positives = 42/57 (73%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++P AWY    +F++ YGF  S+SD SLFI++ +G   YFLV VDDLL+TG SS+L+
Sbjct: 594 QAPHAWYNALHSFVVTYGFFKSKSDPSLFIYHKDGITAYFLVYVDDLLLTGNSSALL 650


>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score =  265 bits (676), Expect(2) = 6e-78
 Identities = 133/233 (57%), Positives = 164/233 (70%), Gaps = 7/233 (3%)
 Frame = -1

Query: 893  LKGSHAQSQPLTTADSLDSPSQAQPPH-YALADPPTSQDWPQPLPT------RTHSMTTR 735
            L+ S + S  L + D +   S   P H + +AD   SQ    P         R H MTTR
Sbjct: 783  LRNSGSHSNVLISHDXV-LXSSLHPTHTHTVADLTLSQSHSIPPSCVQTGNPRLHKMTTR 841

Query: 734  SQNNIFKPKQLHHTTKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAV 555
            S NNIFKPKQLH  +KH +P ++EP+ +TQA+  PQWR AM+ E TAL+++ TW LVP +
Sbjct: 842  SMNNIFKPKQLHLVSKHPIPLAIEPTCATQAVNHPQWRDAMSTELTALMKHGTWDLVPPL 901

Query: 554  PNQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLK 375
            PN   VGCKWVFR+KR+ DGS+D++KTRLVAK + QRPGLDY ETFSPVV+P TIR VL 
Sbjct: 902  PNCTPVGCKWVFRVKRKADGSVDKFKTRLVAKDYTQRPGLDYKETFSPVVRPATIRCVLT 961

Query: 374  LALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            +A+ NGWP+RQ+D NNAF HGTL E VYM QPPGF DT+ P HVC+LRK IYG
Sbjct: 962  IAVMNGWPLRQMDINNAFLHGTLTETVYMMQPPGFKDTSKPDHVCRLRKAIYG 1014



 Score = 57.0 bits (136), Expect(2) = 6e-78
 Identities = 27/61 (44%), Positives = 38/61 (62%)
 Frame = -2

Query: 214  ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLIFSL 35
            ++PRAWY   R  L   GF NS++D+SLFI+ +     YFLV VDDL+ITG     +  +
Sbjct: 1017 QAPRAWYTTLRTALFQLGFKNSKADSSLFIYTHGPIICYFLVYVDDLVITGNDIQFVDHI 1076

Query: 34   V 32
            +
Sbjct: 1077 I 1077


>gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine
            soja]
          Length = 1294

 Score =  255 bits (652), Expect(2) = 1e-77
 Identities = 136/234 (58%), Positives = 159/234 (67%), Gaps = 11/234 (4%)
 Frame = -1

Query: 884  SHAQSQPLTTADSLDSPSQAQPPHYALADPPTSQDWPQ----PLPTRTH----SMTTRSQ 729
            S A S P  T     + S  +P +   + PPTSQ  PQ    P  T  +     + TRS+
Sbjct: 695  SPAPSSPSITNSPYMAQSSTEPTNPTQSPPPTSQSSPQLSAPPPQTIVNPNGGGIITRSK 754

Query: 728  NNIFKPKQ---LHHTTKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPA 558
            NNI KP Q   LH     Q  + +EP+  TQAL+DP WR+AM  EF AL  NNTW LV  
Sbjct: 755  NNIIKPIQKLNLHV----QASSPIEPNTITQALRDPDWRSAMQAEFDALHHNNTWDLVSR 810

Query: 557  VPNQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVL 378
              +QN+VGCKWVFRIKR PDGSIDRYK RLVAKGFHQR G DYTETFSPVVKP TIR+VL
Sbjct: 811  SSDQNLVGCKWVFRIKRNPDGSIDRYKARLVAKGFHQRSGWDYTETFSPVVKPVTIRIVL 870

Query: 377  KLALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
             LA+  GWPIRQLD NNAF  GTL+EEV+M QPPGFV+ N+P HVC+L+K +YG
Sbjct: 871  TLAVRQGWPIRQLDVNNAFLQGTLKEEVFMIQPPGFVNKNFPDHVCRLKKALYG 924



 Score = 65.1 bits (157), Expect(2) = 1e-77
 Identities = 29/62 (46%), Positives = 41/62 (66%)
 Frame = -2

Query: 214  ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLIFSL 35
            ++PRAWY E R FL   GF NS +D SLFI+      +Y LV VDD+++TG SS+ +  L
Sbjct: 927  QAPRAWYTELRIFLFSLGFVNSTADASLFIYQKPEVTLYLLVYVDDIIMTGNSSAELSKL 986

Query: 34   VS 29
            ++
Sbjct: 987  IA 988


>gb|OMO97681.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
           capsularis]
          Length = 751

 Score =  259 bits (661), Expect(2) = 2e-77
 Identities = 129/217 (59%), Positives = 160/217 (73%), Gaps = 3/217 (1%)
 Frame = -1

Query: 857 TADSLDSPSQAQPPHYALADPPTSQDWP-QPLP--TRTHSMTTRSQNNIFKPKQLHHTTK 687
           ++ S+ + SQ      +  +  T+Q  P Q LP  T+THSM TRSQNNIFKPKQ +  +K
Sbjct: 222 SSSSVLTSSQGNDTLLSSLNSITTQTKPTQTLPHITQTHSMVTRSQNNIFKPKQGYIVSK 281

Query: 686 HQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKR 507
           H LP   EPS  +QA+K P+WR AM  EF +LV N  W LVP   +QNVVG KWV+RIKR
Sbjct: 282 HTLPELTEPSCVSQAIKKPEWREAMTAEFNSLVNNGIWTLVPPCTSQNVVGNKWVYRIKR 341

Query: 506 RPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENN 327
           +PDGSIDR+K RLV  GFHQRPGLD+T+TFSP++KPTTIR VL +ALS+GW ++QLD++N
Sbjct: 342 KPDGSIDRFKARLVVNGFHQRPGLDFTDTFSPMIKPTTIRTVLCIALSSGWSLKQLDDDN 401

Query: 326 AFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
           AF  GTL +EVYM QPPGF D + P HVCKL+K IYG
Sbjct: 402 AFLQGTLTDEVYMTQPPGFEDKDNPSHVCKLQKAIYG 438



 Score = 60.8 bits (146), Expect(2) = 2e-77
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++ RAW +E   FLL YGFTNS +D SLF++ +  + IYFLV V DL++TG +   +
Sbjct: 441 QAQRAWDQELSTFLLQYGFTNSTADASLFVYKSGSDLIYFLVYVVDLIVTGNNQHFV 497


>gb|OMO50520.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
           capsularis]
          Length = 583

 Score =  260 bits (665), Expect = 4e-77
 Identities = 130/229 (56%), Positives = 159/229 (69%), Gaps = 3/229 (1%)
 Frame = -1

Query: 893 LKGSHAQSQPLTTADSLDSPSQAQPP---HYALADPPTSQDWPQPLPTRTHSMTTRSQNN 723
           L+  H+ S+  +T   + S S   P      +  D   S   PQP+ TRTH M TRSQNN
Sbjct: 46  LQAVHSSSEDSSTQLEMASLSSIPPRSNNEVSSLDSTASSLIPQPV-TRTHPMITRSQNN 104

Query: 722 IFKPKQLHHTTKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQN 543
           IFKPKQLH  TKH LP +LEP+++TQA+K  +W+AAM EEFTAL  N TW+LVP   N+N
Sbjct: 105 IFKPKQLHSATKHPLPDTLEPTSTTQAIKILEWKAAMCEEFTALQNNRTWELVPRPENRN 164

Query: 542 VVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALS 363
           ++G KWVF +K  PDGS+ ++K RLVAKGF QRPGLDY ETFSP++K  T+R+VL + +S
Sbjct: 165 IIGSKWVFHVKTNPDGSVSKFKARLVAKGFSQRPGLDYKETFSPIIKLVTVRLVLCIDVS 224

Query: 362 NGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
           N WP+ QLD NNAF  G L EEVYM QP  FVD   P HVCKLRK IYG
Sbjct: 225 NNWPLHQLDINNAFLQGDLAEEVYMKQPAMFVDKTKPHHVCKLRKAIYG 273


>ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807900 [Tarenaya
            hassleriana]
          Length = 1047

 Score =  256 bits (655), Expect(2) = 7e-77
 Identities = 125/185 (67%), Positives = 140/185 (75%), Gaps = 1/185 (0%)
 Frame = -1

Query: 767  LPTRTHSMTTRSQNNIFKPKQLHHTTKHQLPAS-LEPSNSTQALKDPQWRAAMAEEFTAL 591
            +P  TH M TRS+NNI  P   +         S +EPS+ TQA+KDP WRAAM EEF AL
Sbjct: 557  VPRNTHPMQTRSKNNILMPNPRYTLMASVADTSDIEPSSVTQAIKDPNWRAAMTEEFQAL 616

Query: 590  VRNNTWQLVPAVPNQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSP 411
             RNNTW LVP+    NVVGC+WVFRIKR+PDGS+DRYK RLVAKGFHQRPG+DY ETFSP
Sbjct: 617  CRNNTWDLVPSSDASNVVGCRWVFRIKRKPDGSVDRYKARLVAKGFHQRPGVDYHETFSP 676

Query: 410  VVKPTTIRVVLKLALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLR 231
            VVKPTTIRVVL LA+S GW +RQLD NNAF  G L EEVYM QPPGF+D   P+ VCKLR
Sbjct: 677  VVKPTTIRVVLSLAVSRGWTLRQLDVNNAFLQGNLSEEVYMSQPPGFIDHASPQLVCKLR 736

Query: 230  KEIYG 216
            K IYG
Sbjct: 737  KAIYG 741



 Score = 61.6 bits (148), Expect(2) = 7e-77
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLIFSL 35
           ++PRAWY E R FLL  GF NS +D SLFI +    +++ LV VDDL+ITG+ S+ +   
Sbjct: 744 QAPRAWYSELRHFLLQSGFQNSVADASLFILHMGPVQLFVLVYVDDLIITGSCSTHLEKF 803

Query: 34  VS 29
           +S
Sbjct: 804 IS 805


>gb|PKA62506.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Apostasia shenzhenica]
          Length = 763

 Score =  254 bits (648), Expect(2) = 7e-77
 Identities = 129/223 (57%), Positives = 159/223 (71%), Gaps = 5/223 (2%)
 Frame = -1

Query: 854  ADSLDSPSQAQPPHYALADPPTSQDWPQPLPTRTHSMTTRSQNNIFKPKQLHHTTKHQLP 675
            +D L++PS   P     ++P T+  +      RT  + TR++N I KP      TK  L 
Sbjct: 499  SDQLENPSLPSPNIQLASNPTTAPTY------RTSPIVTRTRNRIHKP-----ITKLNLS 547

Query: 674  ASL----EPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKR 507
            A L    EP   TQA+KD +WR AM+ EF ALV+N TW+LVP    QN+VGCKW+FRIKR
Sbjct: 548  ALLAQEVEPKCVTQAIKDDKWRQAMSTEFDALVQNGTWELVPPNAAQNIVGCKWIFRIKR 607

Query: 506  RPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENN 327
             PDGSIDRYK RLVAKGFHQRPG+DY ETFSPVVKPTT+R+VL +A+S GW +RQLD NN
Sbjct: 608  SPDGSIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSIAISRGWSLRQLDVNN 667

Query: 326  AFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG-RVSPC 201
            AF  GTL E+VYM QP GF+DT++P+HVCKLRK IYG + +PC
Sbjct: 668  AFLQGTLTEDVYMQQPQGFIDTDHPKHVCKLRKAIYGLKQAPC 710



 Score = 64.3 bits (155), Expect(2) = 7e-77
 Identities = 30/57 (52%), Positives = 39/57 (68%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++P AWY E R FLL  GF NS +DTSLFIF      +Y LV VDD++ITG+ S+ +
Sbjct: 707 QAPCAWYNELRQFLLHSGFINSTADTSLFIFNQNEVTLYLLVYVDDIIITGSDSTAV 763


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  248 bits (634), Expect(2) = 9e-77
 Identities = 131/232 (56%), Positives = 162/232 (69%), Gaps = 9/232 (3%)
 Frame = -1

Query: 884  SHAQSQPLTTADSLDSPSQAQPPHYALADPP-------TSQDWPQPLPTRT-HSMTTRSQ 729
            S A SQ L   ++  SP  A  PH A + P        T+ + P P+P  T H MTTR++
Sbjct: 764  SAASSQGLPLFETT-SPPAAPFPHQASSAPQPSPQPSLTTTEPPIPVPPPTQHRMTTRAK 822

Query: 728  NNIFKPKQLHHTTKHQLP-ASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVP 552
            NNI KP Q  +   H+    +  P++ +QALKD  WR AM++E+ ALVRN TW+LVP   
Sbjct: 823  NNITKPIQKLNLHTHKPTFQTTTPTSISQALKDQNWRQAMSDEYDALVRNGTWELVPPED 882

Query: 551  NQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKL 372
              N+VGCKW+FRIKR  DGSIDRYK RLVAKGFHQRPG+DY ETFSPVVKPTT+R+VL +
Sbjct: 883  ITNLVGCKWIFRIKRNSDGSIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSI 942

Query: 371  ALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            A+SNGW +RQLD NNAF  G L E V+M QPPGFVD+++P +VCKL K IYG
Sbjct: 943  AVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPGFVDSDHPSYVCKLHKAIYG 994



 Score = 69.3 bits (168), Expect(2) = 9e-77
 Identities = 31/61 (50%), Positives = 42/61 (68%)
 Frame = -2

Query: 214  ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLIFSL 35
            ++PRAWY E R FLL  GF NS SDTSLF+  +    +Y LV VDD+++TG+S +L+   
Sbjct: 997  QAPRAWYHELRQFLLTSGFKNSHSDTSLFVLRSSNHVVYLLVYVDDIILTGSSDTLVSQF 1056

Query: 34   V 32
            V
Sbjct: 1057 V 1057


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  247 bits (631), Expect(2) = 1e-76
 Identities = 118/196 (60%), Positives = 142/196 (72%), Gaps = 2/196 (1%)
 Frame = -1

Query: 797  PPTSQDWPQP--LPTRTHSMTTRSQNNIFKPKQLHHTTKHQLPASLEPSNSTQALKDPQW 624
            PPT  D  QP  L    H + TRS++NI KP Q  + T      +LEP+  TQALKDP+W
Sbjct: 571  PPTQNDPNQPPDLSPSPHVIVTRSKHNIHKPIQKXNLTAXLQQPTLEPTTVTQALKDPKW 630

Query: 623  RAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQR 444
            R AM+ EF AL+RN TW LVP+ P QN+ GCKW+FR K  P+GSIDRYK RLVAKGFHQ 
Sbjct: 631  RQAMSAEFDALLRNGTWDLVPSHPXQNLXGCKWIFRTKYLPNGSIDRYKARLVAKGFHQX 690

Query: 443  PGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVD 264
            PG  Y+ETFSPV+KPTT+R+VL LA+  GW +RQLD NN F  GTL E+ +M QPPGF+D
Sbjct: 691  PGXXYSETFSPVIKPTTVRLVLSLAVXQGWSLRQLDXNNXFLQGTLTEDXFMSQPPGFID 750

Query: 263  TNYPRHVCKLRKEIYG 216
             ++P HVCKLRK IYG
Sbjct: 751  RDHPHHVCKLRKAIYG 766



 Score = 69.7 bits (169), Expect(2) = 1e-76
 Identities = 32/53 (60%), Positives = 39/53 (73%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTS 56
           ++PRAWY E R FLL +GF NS  DTSLFIF N G  +Y LV VDD++ITG +
Sbjct: 769 QAPRAWYHELRQFLLQFGFINSIVDTSLFIFNNHGTILYLLVHVDDIIITGNN 821


>gb|PNY14327.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1151

 Score =  252 bits (644), Expect(2) = 7e-76
 Identities = 122/219 (55%), Positives = 151/219 (68%)
 Frame = -1

Query: 872  SQPLTTADSLDSPSQAQPPHYALADPPTSQDWPQPLPTRTHSMTTRSQNNIFKPKQLHHT 693
            S+P   +D L S     P    L   PT+       P+R+  + TRS+NNIFKPK++  T
Sbjct: 565  SEPAAVSD-LTSNGNTDPSADVLPSLPTTTRPGPTNPSRSEPIITRSKNNIFKPKKVFTT 623

Query: 692  TKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWVFRI 513
            TKH++P ++EPS  TQALK P+W  A + EF AL+ N TW LVP    QN+VGCKW+FR+
Sbjct: 624  TKHEIPENIEPSTVTQALKIPEWSQACSAEFDALLHNRTWSLVPRTNKQNIVGCKWLFRV 683

Query: 512  KRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQLDE 333
            KR PDGS+ RYK RLVAKGF Q PG+D+ ETFSPVVKP TI+VVL +AL+  WP+ QLD 
Sbjct: 684  KRNPDGSVSRYKARLVAKGFTQTPGIDFKETFSPVVKPQTIKVVLTIALARRWPMHQLDV 743

Query: 332  NNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            NNAF  G L E+VYM QP GFV  ++P HVCKL K IYG
Sbjct: 744  NNAFLQGKLTEDVYMQQPSGFVHKDFPHHVCKLHKAIYG 782



 Score = 62.4 bits (150), Expect(2) = 7e-76
 Identities = 26/57 (45%), Positives = 41/57 (71%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++PRAW++  +++++ YGFT S SD+SLFI+  +G   + LV VDDLLITG+    +
Sbjct: 785 QAPRAWHEALKSYVVSYGFTTSCSDSSLFIYNKDGVEAFLLVYVDDLLITGSHEQFL 841


>gb|PNX72737.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 950

 Score =  250 bits (638), Expect(2) = 1e-75
 Identities = 124/222 (55%), Positives = 156/222 (70%), Gaps = 5/222 (2%)
 Frame = -1

Query: 866  PLTTADSLDS----PSQAQPPHYALADPPTSQDWPQPLP-TRTHSMTTRSQNNIFKPKQL 702
            P +T  SL+     PS  Q   + L+   ++ D   P P   THSM TR +  IFKPK+L
Sbjct: 538  PPSTLPSLEQTQSEPSSHQLSEHTLSTSQSNADVTLPAPFAETHSMITRGKAGIFKPKKL 597

Query: 701  HHTTKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQNVVGCKWV 522
               TK+ LP S EP+  T+ALK  +W+ AM++EFTAL+ N TW LVP  P+ NV+G KWV
Sbjct: 598  FSITKYPLPPSAEPTCVTEALKHSEWKQAMSDEFTALMNNGTWSLVPPQPHFNVIGNKWV 657

Query: 521  FRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALSNGWPIRQ 342
            FR+KR PDGSI RYK RLVAKGFHQRPG+DY +TFSPV+KP TI++VL +ALS  W + Q
Sbjct: 658  FRLKRNPDGSISRYKARLVAKGFHQRPGIDYKDTFSPVIKPQTIKMVLCIALSKNWNLMQ 717

Query: 341  LDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
            +D NNAF +GTL EEVYM QPPGFV +++P  VCKL K +YG
Sbjct: 718  MDVNNAFLNGTLNEEVYMVQPPGFVHSSHPNFVCKLHKSLYG 759



 Score = 63.9 bits (154), Expect(2) = 1e-75
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
           ++PRAWY    +F+  YGF  S+SD SLFI+  +    YFLV VDDLL+TG SS+ +
Sbjct: 762 QAPRAWYNALHSFVCNYGFFKSKSDPSLFIYKKDHIVAYFLVYVDDLLLTGNSSTFL 818


>ref|XP_012075349.1| uncharacterized protein LOC105636635 [Jatropha curcas]
          Length = 732

 Score =  253 bits (646), Expect(2) = 3e-75
 Identities = 123/231 (53%), Positives = 156/231 (67%), Gaps = 8/231 (3%)
 Frame = -1

Query: 884 SHAQSQPLTTADSLDSPSQAQPPHYALA--------DPPTSQDWPQPLPTRTHSMTTRSQ 729
           S + S  + T+ SL S   + P   ++         D  +     +P P RTH M TRSQ
Sbjct: 265 SSSDSSSMATSASLSSVPVSSPMFVSVESHQSVTCFDSSSHTQSTEPPPQRTHPMVTRSQ 324

Query: 728 NNIFKPKQLHHTTKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPN 549
           NNI+KPK LH  TKH LPA++EP+  TQ LK P+WR AM  EF AL+ N TW LVP    
Sbjct: 325 NNIYKPKVLHTVTKHPLPATVEPTRVTQPLKLPKWRQAMNVEFYALITNGTWVLVPPAAG 384

Query: 548 QNVVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLA 369
           QN+VGCKW+FR+KR  DG++ +YK RLVAKG+ QRPG+D+ +TFSPV+KPTTIRV+L +A
Sbjct: 385 QNLVGCKWIFRVKRTLDGTVAKYKARLVAKGYTQRPGIDFEDTFSPVLKPTTIRVILTMA 444

Query: 368 LSNGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
           +S  W + QLD NNAF HG L E VYM QPPGF+D+  P +VCKL K +YG
Sbjct: 445 VSKRWNVYQLDVNNAFLHGPLSENVYMQQPPGFIDSEKPHYVCKLVKALYG 495



 Score = 59.7 bits (143), Expect(2) = 3e-75
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = -2

Query: 214 ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLIFSL 35
           ++PRAWY+  R   + +GF  S+SD SLFI     +  +FLV VDDLL+TG  + LI   
Sbjct: 498 QAPRAWYQALRNCAVQFGFVQSKSDHSLFILQRGAKTCFFLVYVDDLLLTGNCNELIHLF 557

Query: 34  VS 29
           +S
Sbjct: 558 IS 559


>gb|PNX95113.1| copia-type polyprotein [Trifolium pratense]
          Length = 1376

 Score =  250 bits (638), Expect(2) = 4e-75
 Identities = 124/229 (54%), Positives = 161/229 (70%), Gaps = 9/229 (3%)
 Frame = -1

Query: 875  QSQPLTTADSLDSPSQAQ--------PPHYALADPPTSQDWPQPLP-TRTHSMTTRSQNN 723
            QS P T+  +  +PS++Q        P  + L+   ++ +   P P   THSMTTR +  
Sbjct: 777  QSTPNTSLPN-PTPSESQSHNQSLNLPHEHTLSTSQSAAEASLPAPFAETHSMTTRGKAG 835

Query: 722  IFKPKQLHHTTKHQLPASLEPSNSTQALKDPQWRAAMAEEFTALVRNNTWQLVPAVPNQN 543
            IFKPK+L   TK+ LP S+EP+  TQAL+  +W+ AM++EF+AL++N TW LVP  P+ N
Sbjct: 836  IFKPKKLFSVTKYPLPPSIEPTCVTQALQHTEWKEAMSDEFSALMKNGTWSLVPPQPHFN 895

Query: 542  VVGCKWVFRIKRRPDGSIDRYKTRLVAKGFHQRPGLDYTETFSPVVKPTTIRVVLKLALS 363
            V+  KWVFR+KR PDGSI RYK RLVAKGFHQRPG+DY +TFSPV+KP TI++VL +ALS
Sbjct: 896  VISNKWVFRLKRNPDGSISRYKARLVAKGFHQRPGIDYKDTFSPVIKPQTIKMVLCIALS 955

Query: 362  NGWPIRQLDENNAFPHGTLEEEVYMDQPPGFVDTNYPRHVCKLRKEIYG 216
             GW + Q+D NNAF +GTL EEVYM QP GFV   YP +VCKL K +YG
Sbjct: 956  KGWSLMQMDVNNAFLNGTLNEEVYMSQPHGFVHQTYPNYVCKLHKSLYG 1004



 Score = 62.4 bits (150), Expect(2) = 4e-75
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = -2

Query: 214  ESPRAWYKEFRAFLLGYGFTNSRSDTSLFIFYNEGERIYFLVSVDDLLITGTSSSLI 44
            ++PRAWY    +F++  GFT S+SD SLFI+  +    YFLV VDD+L+TG SS  +
Sbjct: 1007 QAPRAWYDALHSFVVNCGFTKSKSDPSLFIYQRDYIVAYFLVYVDDILLTGNSSKFL 1063