BLASTX nr result

ID: Acanthopanax21_contig00000080 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00000080
         (969 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265587.2| PREDICTED: probable mitochondrial intermedia...    52   3e-06
emb|CBI24552.3| unnamed protein product, partial [Vitis vinifera]      52   3e-06

>ref|XP_002265587.2| PREDICTED: probable mitochondrial intermediate peptidase,
           mitochondrial [Vitis vinifera]
          Length = 719

 Score = 52.0 bits (123), Expect(3) = 3e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 112 PLSQCIEGLKVLIESLFGVTFRSIPLA 32
           PL QCIEGLKVL+ESLFG TFRSIPLA
Sbjct: 381 PLHQCIEGLKVLVESLFGATFRSIPLA 407



 Score = 26.2 bits (56), Expect(3) = 3e-06
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 41  PSSHGEAWHPDVL 3
           P + GE+WHPDVL
Sbjct: 405 PLAPGESWHPDVL 417



 Score = 21.6 bits (44), Expect(3) = 3e-06
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 129 VVASYFPYHNVL 94
           VVASYFP H  +
Sbjct: 375 VVASYFPLHQCI 386


>emb|CBI24552.3| unnamed protein product, partial [Vitis vinifera]
          Length = 551

 Score = 52.0 bits (123), Expect(3) = 3e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 112 PLSQCIEGLKVLIESLFGVTFRSIPLA 32
           PL QCIEGLKVL+ESLFG TFRSIPLA
Sbjct: 453 PLHQCIEGLKVLVESLFGATFRSIPLA 479



 Score = 26.2 bits (56), Expect(3) = 3e-06
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 41  PSSHGEAWHPDVL 3
           P + GE+WHPDVL
Sbjct: 477 PLAPGESWHPDVL 489



 Score = 21.6 bits (44), Expect(3) = 3e-06
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 129 VVASYFPYHNVL 94
           VVASYFP H  +
Sbjct: 447 VVASYFPLHQCI 458


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