BLASTX nr result
ID: Acanthopanax21_contig00000026
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00000026
(879 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_025855659.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
ref|WP_021528287.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
ref|WP_097495033.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
ref|WP_097432332.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
ref|WP_097343893.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
ref|WP_032212269.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
ref|WP_001696077.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
ref|WP_000081551.1| RNA polymerase sigma factor RpoS [Escherichi... 563 0.0
gb|AAG53883.1|AF275947_2 sigma factor RpoS [Escherichia coli] 563 0.0
emb|CCQ01754.1| RNA polymerase sigma factor RpoS [Escherichia co... 563 0.0
gb|OWE45331.1| RNA polymerase sigma factor RpoS, partial [Escher... 556 0.0
ref|WP_000796918.1| MULTISPECIES: RNA polymerase sigma factor Rp... 556 0.0
emb|CID52101.1| RNA polymerase sigma subunit RpoS (sigma-38) [Sa... 556 0.0
ref|WP_097344758.1| RNA polymerase sigma factor RpoS [Escherichi... 556 0.0
ref|WP_052895203.1| RNA polymerase sigma factor RpoS, partial [S... 556 0.0
ref|WP_001748023.1| RNA polymerase sigma factor RpoS [Salmonella... 556 0.0
ref|WP_106121226.1| RNA polymerase sigma factor RpoS, partial [E... 556 0.0
gb|KJT53471.1| RNA polymerase sigma factor RpoS, partial [Salmon... 556 0.0
ref|WP_099356654.1| RNA polymerase sigma factor RpoS [Escherichi... 556 0.0
ref|WP_097730504.1| RNA polymerase sigma factor RpoS [Escherichi... 556 0.0
>ref|WP_025855659.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|KFB95640.1| RpoS family RNA polymerase sigma factor [Escherichia coli DSM 30083
= JCM 1649 = ATCC 11775]
Length = 354
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREEVSIC 335
>ref|WP_021528287.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|EQQ72248.1| RNA polymerase sigma factor rpoS [Escherichia coli HVH 107
(4-5860571)]
Length = 354
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRELVSIC 335
>ref|WP_097495033.1| RNA polymerase sigma factor RpoS [Escherichia coli]
Length = 356
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREYVSIC 335
>ref|WP_097432332.1| RNA polymerase sigma factor RpoS [Escherichia coli]
Length = 356
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREEVSIC 335
>ref|WP_097343893.1| RNA polymerase sigma factor RpoS [Escherichia coli]
Length = 356
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRELVSIC 335
>ref|WP_032212269.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|EYY00676.1| RNA polymerase sigma factor RpoS [Escherichia coli O121:H19 str.
2011C-3537]
Length = 356
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREQVSIC 335
>ref|WP_001696077.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|EMD09150.1| hypothetical protein A364_13867 [Escherichia coli SEPT362]
Length = 359
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREYVSIC 335
>ref|WP_000081551.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|EGW66530.1| RNA polymerase sigma factor RpoS [Escherichia coli STEC_C165-02]
gb|OTB55449.1| RNA polymerase sigma factor RpoS [Escherichia coli]
Length = 359
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREKVSIC 335
>gb|AAG53883.1|AF275947_2 sigma factor RpoS [Escherichia coli]
Length = 366
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 56 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 115
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 116 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 175
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 176 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 235
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 236 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 295
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 296 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREKVSIC 347
>emb|CCQ01754.1| RNA polymerase sigma factor RpoS [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
Length = 372
Score = 563 bits (1451), Expect = 0.0
Identities = 291/292 (99%), Positives = 291/292 (99%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 44 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 103
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 104 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 163
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 164 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 223
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 224 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 283
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE*VSIC 877
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE VSIC
Sbjct: 284 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFREEVSIC 335
>gb|OWE45331.1| RNA polymerase sigma factor RpoS, partial [Escherichia coli]
Length = 290
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 4 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 63
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 64 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 123
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 124 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 183
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 184 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 243
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 244 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 290
>ref|WP_000796918.1| MULTISPECIES: RNA polymerase sigma factor RpoS, partial
[Enterobacteriaceae]
dbj|BAE76818.1| RNA polymerase, sigma S (sigma 38) factor [Escherichia coli str.
K-12 substr. W3110]
emb|CAQ87891.1| RNA polymerase, sigma S (sigma 38) factor [Escherichia fergusonii
ATCC 35469]
gb|EFX14912.1| RNA polymerase sigma factor RpoS [Escherichia coli O157:H- str.
493-89]
gb|EGV48810.1| RNA polymerase sigma factor RpoS [Escherichia coli XH001]
gb|KGL71113.1| RNA polymerase sigma factor RpoS [Escherichia coli NCTC 50110]
gb|AKO58223.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|ANK08197.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|OTC77757.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|OTD20663.1| RNA polymerase sigma factor RpoS [Escherichia coli]
gb|AUP45655.1| RpoS variant [Escherichia coli]
Length = 291
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 5 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 64
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 65 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 124
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 125 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 184
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 185 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 244
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 245 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 291
>emb|CID52101.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 292
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 6 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 65
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 66 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 125
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 126 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 185
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 186 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 245
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 246 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 292
>ref|WP_097344758.1| RNA polymerase sigma factor RpoS [Escherichia coli]
Length = 294
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 8 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 67
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 68 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 127
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 128 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 187
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 188 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 247
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 248 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 294
>ref|WP_052895203.1| RNA polymerase sigma factor RpoS, partial [Salmonella enterica]
gb|KNV81320.1| RNA polymerase subunit sigma, partial [Salmonella enterica subsp.
enterica serovar Derby]
Length = 300
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 14 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 73
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 74 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 133
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 134 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 193
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 194 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 253
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 254 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 300
>ref|WP_001748023.1| RNA polymerase sigma factor RpoS [Salmonella enterica]
gb|ELP09976.1| RNA polymerase sigma factor RpoS [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gb|ESH44864.1| RNA polymerase sigma factor RpoS [Salmonella enterica subsp.
enterica serovar Berta str. ATCC 8392]
gb|EYH53430.1| RNA polymerase sigma factor RpoS [Salmonella enterica subsp.
enterica serovar Heidelberg str. SARA32]
emb|CHZ14374.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CHO82678.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CGC65170.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CHF44621.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CHO20662.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CHF04601.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CHZ08093.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
gb|AKR14666.1| RNA polymerase sigma factor RpoS [Salmonella enterica subsp.
enterica serovar Enteritidis str. EC20120005]
emb|CPR58344.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Bovismorbificans]
emb|CQS63834.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CQM20479.1| RNA polymerase sigma subunit RpoS (sigma-38) [Salmonella enterica
subsp. enterica serovar Typhimurium str. DT104]
gb|KNM67398.1| RNA polymerase subunit sigma [Salmonella enterica subsp. enterica
serovar Worthington]
gb|KZB43637.1| RNA polymerase sigma factor RpoS [Salmonella enterica subsp.
enterica serovar Schwarzengrund]
gb|PNV43861.1| RNA polymerase sigma factor RpoS [Salmonella enterica subsp.
arizonae serovar 18:z4,z23:- str. CVM 43480]
Length = 301
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 15 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 74
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 75 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 134
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 135 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 194
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 195 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 254
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 255 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 301
>ref|WP_106121226.1| RNA polymerase sigma factor RpoS, partial [Escherichia coli]
Length = 302
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 16 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 75
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 76 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 135
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 136 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 195
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 196 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 255
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 256 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 302
>gb|KJT53471.1| RNA polymerase sigma factor RpoS, partial [Salmonella enterica
subsp. enterica serovar Heidelberg str. RI-11-013343]
Length = 303
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 17 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 76
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 77 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 136
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 137 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 196
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 197 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 256
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 257 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 303
>ref|WP_099356654.1| RNA polymerase sigma factor RpoS [Escherichia coli]
Length = 304
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 18 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 77
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 78 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 137
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 138 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 197
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 198 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 257
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 258 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 304
>ref|WP_097730504.1| RNA polymerase sigma factor RpoS [Escherichia coli]
Length = 305
Score = 556 bits (1434), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 2 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 181
ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV
Sbjct: 19 ELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVV 78
Query: 182 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 361
KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR
Sbjct: 79 KIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTR 138
Query: 362 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 541
TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD
Sbjct: 139 TIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVD 198
Query: 542 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 721
TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY
Sbjct: 199 TPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGY 258
Query: 722 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 862
EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
Sbjct: 259 EAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 305