BLASTX nr result
ID: Ziziphus21_contig00048594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00048594
(249 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012143529.1| PREDICTED: collagen alpha-2(IV) chain isofor... 71 3e-10
ref|XP_003704566.1| PREDICTED: collagen alpha-5(IV) chain isofor... 71 3e-10
ref|XP_012343640.1| PREDICTED: LOW QUALITY PROTEIN: collagen alp... 67 7e-09
gb|KPI93819.1| Collagen alpha-1(IV) chain [Papilio xuthus] 66 1e-08
ref|XP_013181013.1| PREDICTED: collagen alpha-1(IV) chain [Papil... 66 1e-08
ref|XP_013133595.1| PREDICTED: collagen alpha-1(IV) chain [Papil... 66 1e-08
ref|XP_014358288.1| PREDICTED: collagen alpha-5(IV) chain [Papil... 65 2e-08
gb|KPJ15137.1| Collagen alpha-1(IV) chain [Papilio machaon] 65 2e-08
gb|KMQ93410.1| collagen alpha-1 chain [Lasius niger] 65 2e-08
ref|XP_011161821.1| PREDICTED: collagen alpha-5(IV) chain [Solen... 64 4e-08
ref|XP_008111581.1| PREDICTED: collagen alpha-1(XVIII) chain-lik... 64 4e-08
ref|XP_011867965.1| PREDICTED: collagen alpha-5(IV) chain isofor... 64 6e-08
ref|XP_011867964.1| PREDICTED: collagen alpha-5(IV) chain isofor... 64 6e-08
ref|XP_011066574.1| PREDICTED: LOW QUALITY PROTEIN: collagen alp... 64 6e-08
ref|XP_006623638.1| PREDICTED: collagen alpha-1(IV) chain-like [... 64 6e-08
ref|XP_006563187.1| PREDICTED: collagen alpha-5(IV) chain [Apis ... 64 6e-08
gb|EGI69784.1| Collagen alpha-1(IV) chain, partial [Acromyrmex e... 64 6e-08
ref|XP_001951336.2| PREDICTED: collagen alpha-1(IV) chain-like [... 64 6e-08
ref|XP_014212328.1| PREDICTED: collagen alpha-5(IV) chain isofor... 63 8e-08
ref|XP_014212326.1| PREDICTED: collagen alpha-1(IV) chain isofor... 63 8e-08
>ref|XP_012143529.1| PREDICTED: collagen alpha-2(IV) chain isoform X2 [Megachile
rotundata]
Length = 1743
Score = 71.2 bits (173), Expect = 3e-10
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = -2
Query: 200 VDGLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
+ GL GDQGPPG G PG+ AERGE G LDGIPG PG+ GQKGAP
Sbjct: 1166 IPGLPGDQGPPGFPGAPGQFAERGEAGRPGLDGIPGIPGVPGQKGAP 1212
>ref|XP_003704566.1| PREDICTED: collagen alpha-5(IV) chain isoform X1 [Megachile
rotundata]
Length = 1835
Score = 71.2 bits (173), Expect = 3e-10
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = -2
Query: 200 VDGLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
+ GL GDQGPPG G PG+ AERGE G LDGIPG PG+ GQKGAP
Sbjct: 1258 IPGLPGDQGPPGFPGAPGQFAERGEAGRPGLDGIPGIPGVPGQKGAP 1304
>ref|XP_012343640.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-2(IV) chain-like [Apis
florea]
Length = 1326
Score = 66.6 bits (161), Expect = 7e-09
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GL GD+GPPG G PG+ AE GE G +DGIPG PG+ GQKGAP
Sbjct: 948 GLPGDEGPPGFPGIPGQFAEAGEDGRPGMDGIPGTPGMPGQKGAP 992
>gb|KPI93819.1| Collagen alpha-1(IV) chain [Papilio xuthus]
Length = 1805
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
G VGDQGPPGL G G NAERG++G A DG+PG PG GQKGAP
Sbjct: 1251 GQVGDQGPPGLPGLDGINAERGQKGRAGFDGLPGWPGPMGQKGAP 1295
>ref|XP_013181013.1| PREDICTED: collagen alpha-1(IV) chain [Papilio xuthus]
Length = 1807
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
G VGDQGPPGL G G NAERG++G A DG+PG PG GQKGAP
Sbjct: 1253 GQVGDQGPPGLPGLDGINAERGQKGRAGFDGLPGWPGPMGQKGAP 1297
>ref|XP_013133595.1| PREDICTED: collagen alpha-1(IV) chain [Papilio polytes]
Length = 1810
Score = 65.9 bits (159), Expect = 1e-08
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -2
Query: 248 GEIXXXXXXXXXXXXGVDGLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQK 69
GEI GV G +GDQGPPGL G G +AERG++G A DG+PG PG GQK
Sbjct: 1235 GEIGMKGLTGEDGLPGVKGQIGDQGPPGLPGLDGIDAERGQKGKAGFDGLPGWPGPMGQK 1294
Query: 68 GAP 60
GAP
Sbjct: 1295 GAP 1297
>ref|XP_014358288.1| PREDICTED: collagen alpha-5(IV) chain [Papilio machaon]
Length = 1806
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
G +GDQGPPGL G G NAERG++G A DG+PG PG GQKGAP
Sbjct: 1253 GQIGDQGPPGLPGLDGINAERGQKGRAGFDGLPGWPGPMGQKGAP 1297
>gb|KPJ15137.1| Collagen alpha-1(IV) chain [Papilio machaon]
Length = 1845
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
G +GDQGPPGL G G NAERG++G A DG+PG PG GQKGAP
Sbjct: 1292 GQIGDQGPPGLPGLDGINAERGQKGRAGFDGLPGWPGPMGQKGAP 1336
>gb|KMQ93410.1| collagen alpha-1 chain [Lasius niger]
Length = 1666
Score = 65.1 bits (157), Expect = 2e-08
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GL GDQGP G G PGE AE GE G A LDG+PGAPG GQKGAP
Sbjct: 1142 GLPGDQGPRGAPGLPGEFAEPGEIGRAGLDGMPGAPGRHGQKGAP 1186
>ref|XP_011161821.1| PREDICTED: collagen alpha-5(IV) chain [Solenopsis invicta]
Length = 1843
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/45 (68%), Positives = 32/45 (71%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GL GDQGP G G PGE AE GE G A LDG+PG PG GQKGAP
Sbjct: 1267 GLPGDQGPRGAPGLPGEFAEPGEPGRAGLDGMPGIPGRPGQKGAP 1311
>ref|XP_008111581.1| PREDICTED: collagen alpha-1(XVIII) chain-like, partial [Anolis
carolinensis]
Length = 693
Score = 63.9 bits (154), Expect = 4e-08
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGA 63
G G +GPPG GPPG+N +GE+G+ AL G PG PG+DG+KG+
Sbjct: 361 GFPGQEGPPGREGPPGQNGPKGEKGETALQGPPGNPGMDGEKGS 404
>ref|XP_011867965.1| PREDICTED: collagen alpha-5(IV) chain isoform X2 [Vollenhovia emeryi]
Length = 1796
Score = 63.5 bits (153), Expect = 6e-08
Identities = 31/45 (68%), Positives = 32/45 (71%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GLVGDQGP G G PGE AE GE G A LDG+ G PG GQKGAP
Sbjct: 1221 GLVGDQGPRGAPGLPGEFAEPGEPGRAGLDGVAGTPGHAGQKGAP 1265
>ref|XP_011867964.1| PREDICTED: collagen alpha-5(IV) chain isoform X1 [Vollenhovia emeryi]
Length = 1842
Score = 63.5 bits (153), Expect = 6e-08
Identities = 31/45 (68%), Positives = 32/45 (71%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GLVGDQGP G G PGE AE GE G A LDG+ G PG GQKGAP
Sbjct: 1267 GLVGDQGPRGAPGLPGEFAEPGEPGRAGLDGVAGTPGHAGQKGAP 1311
>ref|XP_011066574.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-5(IV) chain
[Acromyrmex echinatior]
Length = 1845
Score = 63.5 bits (153), Expect = 6e-08
Identities = 31/45 (68%), Positives = 32/45 (71%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GL GDQGP G G PGE AE GE G A LDG+PG PG GQKGAP
Sbjct: 1265 GLPGDQGPHGAPGLPGEFAEPGEPGRAGLDGMPGIPGRAGQKGAP 1309
>ref|XP_006623638.1| PREDICTED: collagen alpha-1(IV) chain-like [Apis dorsata]
Length = 1783
Score = 63.5 bits (153), Expect = 6e-08
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GL GD+GPPG G G+ AE GE G +DGIPG PG+ GQKGAP
Sbjct: 1204 GLPGDEGPPGFPGISGQFAEAGEDGRPGIDGIPGTPGMPGQKGAP 1248
>ref|XP_006563187.1| PREDICTED: collagen alpha-5(IV) chain [Apis mellifera]
Length = 1833
Score = 63.5 bits (153), Expect = 6e-08
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GL GD+GPPG G G+ AE GE G +DGIPG PG+ GQKGAP
Sbjct: 1254 GLPGDEGPPGFPGISGQFAEAGEDGRPGMDGIPGTPGIPGQKGAP 1298
>gb|EGI69784.1| Collagen alpha-1(IV) chain, partial [Acromyrmex echinatior]
Length = 1705
Score = 63.5 bits (153), Expect = 6e-08
Identities = 31/45 (68%), Positives = 32/45 (71%)
Frame = -2
Query: 194 GLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
GL GDQGP G G PGE AE GE G A LDG+PG PG GQKGAP
Sbjct: 1125 GLPGDQGPHGAPGLPGEFAEPGEPGRAGLDGMPGIPGRAGQKGAP 1169
>ref|XP_001951336.2| PREDICTED: collagen alpha-1(IV) chain-like [Acyrthosiphon pisum]
Length = 1760
Score = 63.5 bits (153), Expect = 6e-08
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = -2
Query: 200 VDGLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
+ G GD GP GL G PG E GE+G + +DG+PG+PG+DGQKGAP
Sbjct: 1256 IKGEQGDTGPEGLPGIPGSFPEHGEKGRSGIDGVPGSPGIDGQKGAP 1302
>ref|XP_014212328.1| PREDICTED: collagen alpha-5(IV) chain isoform X2 [Copidosoma
floridanum]
Length = 1768
Score = 63.2 bits (152), Expect = 8e-08
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -2
Query: 200 VDGLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
V G +GD GP G +GPPGE AE GE G+ DGIPG PG G KG+P
Sbjct: 1161 VKGTIGDVGPVGPQGPPGEYAEAGEPGEPGFDGIPGTPGQAGPKGSP 1207
>ref|XP_014212326.1| PREDICTED: collagen alpha-1(IV) chain isoform X1 [Copidosoma
floridanum]
Length = 1855
Score = 63.2 bits (152), Expect = 8e-08
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -2
Query: 200 VDGLVGDQGPPGLRGPPGENAERGEQGDAALDGIPGAPGLDGQKGAP 60
V G +GD GP G +GPPGE AE GE G+ DGIPG PG G KG+P
Sbjct: 1248 VKGTIGDVGPVGPQGPPGEYAEAGEPGEPGFDGIPGTPGQAGPKGSP 1294