BLASTX nr result

ID: Ziziphus21_contig00047056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00047056
         (351 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KKY20124.1| putative rna polymerase iii transcription factor ...   130   5e-28
gb|EKG10678.1| Tetratricopeptide-like helical [Macrophomina phas...   128   2e-27

>gb|KKY20124.1| putative rna polymerase iii transcription factor tfiiic subunit
           [Diplodia seriata]
          Length = 945

 Score =  130 bits (326), Expect = 5e-28
 Identities = 72/117 (61%), Positives = 79/117 (67%)
 Frame = -1

Query: 351 VAKGGVDLVRRAKLNVQLPTQRPTQPRDLTXXXXXXXXXXXXXXAVLRELAPKPTTLQSL 172
           +AKGG+DLVR+AKLNVQLPTQR TQ ++                 VLRELAPKPTTLQSL
Sbjct: 443 IAKGGIDLVRKAKLNVQLPTQRATQAKEYVKKPVSVKASRPPRPTVLRELAPKPTTLQSL 502

Query: 171 EPKKSLXXXXXXXXXXXXXXXXRLRGLLDAEREKLEGAQQRDRVIREMYQELKSIED 1
           EPK S                 RLRGLLD+E+EKLEGAQQRDR IREMYQELKSIED
Sbjct: 503 EPKMSPTRPKEAKEVKEHKSRRRLRGLLDSEKEKLEGAQQRDRAIREMYQELKSIED 559


>gb|EKG10678.1| Tetratricopeptide-like helical [Macrophomina phaseolina MS6]
          Length = 1155

 Score =  128 bits (321), Expect = 2e-27
 Identities = 74/120 (61%), Positives = 79/120 (65%), Gaps = 3/120 (2%)
 Frame = -1

Query: 351 VAKGGVDLVRRAKLNVQLPTQRPTQPRDLTXXXXXXXXXXXXXXAVLRELAPKPTTLQSL 172
           VAKGGVD+VR+AKLNVQ+P QR TQP+D+T               VLRELAPKPTTLQSL
Sbjct: 621 VAKGGVDIVRKAKLNVQIPVQRHTQPKDITKRPTPLKPSRPSRPTVLRELAPKPTTLQSL 680

Query: 171 E---PKKSLXXXXXXXXXXXXXXXXRLRGLLDAEREKLEGAQQRDRVIREMYQELKSIED 1
           E   P                    RLRGLLDAEREKLEGAQQRDR IREMYQELKSIED
Sbjct: 681 ESKRPSTKPREAREPKEFREPKPRRRLRGLLDAEREKLEGAQQRDRAIREMYQELKSIED 740


Top