BLASTX nr result

ID: Ziziphus21_contig00037986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00037986
         (299 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003061173.1| cytochrome b6-f complex subunit [Micromonas ...    65   2e-08
ref|XP_002503160.1| predicted protein [Micromonas sp. RCC299] gi...    64   3e-08
ref|XP_005649602.1| hypothetical protein COCSUDRAFT_52753 [Cocco...    64   6e-08
ref|XP_011401984.1| Cytochrome b6-f complex subunit 8, chloropla...    63   8e-08
ref|XP_002952299.1| subunit of the chloroplast cytochrome b6f co...    60   5e-07
ref|XP_001698251.1| subunit of the chloroplast cytochrome b6f co...    60   5e-07
emb|CEF99789.1| Cytochrome b6-f complex, subunit 8 [Ostreococcus...    60   8e-07
sp|P0C1D4.2|PETN_CHLRE RecName: Full=Cytochrome b6-f complex sub...    59   1e-06
ref|XP_001420753.1| subunit PetN of cytochrome b6f complex [Ostr...    59   2e-06

>ref|XP_003061173.1| cytochrome b6-f complex subunit [Micromonas pusilla CCMP1545]
           gi|226457524|gb|EEH54823.1| cytochrome b6-f complex
           subunit [Micromonas pusilla CCMP1545]
          Length = 107

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -2

Query: 268 MELMTVAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           MEL  VAEGEPFIVN+ WA++ A F+FSLSLVVWGRSGL
Sbjct: 69  MELTQVAEGEPFIVNLAWAAIMATFSFSLSLVVWGRSGL 107


>ref|XP_002503160.1| predicted protein [Micromonas sp. RCC299]
           gi|226518426|gb|ACO64418.1| predicted protein
           [Micromonas sp. RCC299]
          Length = 107

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -2

Query: 268 MELMTVAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           MEL+ VAEGEP IVNV W +L A F+FSLSLVVWGRSGL
Sbjct: 69  MELVQVAEGEPLIVNVAWGALMATFSFSLSLVVWGRSGL 107


>ref|XP_005649602.1| hypothetical protein COCSUDRAFT_52753 [Coccomyxa subellipsoidea
           C-169] gi|384251581|gb|EIE25058.1| hypothetical protein
           COCSUDRAFT_52753 [Coccomyxa subellipsoidea C-169]
          Length = 108

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -2

Query: 265 ELMTVAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           E+M +AEGEPFIVNVGWA+L A F+FSL+ VVWGRSG+
Sbjct: 71  EVMQLAEGEPFIVNVGWAALAASFSFSLAAVVWGRSGM 108


>ref|XP_011401984.1| Cytochrome b6-f complex subunit 8, chloroplastic [Auxenochlorella
           protothecoides] gi|675356495|gb|KFM28935.1| Cytochrome
           b6-f complex subunit 8, chloroplastic [Auxenochlorella
           protothecoides]
          Length = 49

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 265 ELMTVAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           E M +AEGEP +V VGWA+ C +FTFS+SLVVWGRSGL
Sbjct: 12  EHMMLAEGEPILVQVGWAATCVIFTFSISLVVWGRSGL 49


>ref|XP_002952299.1| subunit of the chloroplast cytochrome b6f complex [Volvox carteri
           f. nagariensis] gi|75202598|sp|Q9SBM8.1|PETN_VOLCA
           RecName: Full=Cytochrome b6-f complex subunit 8,
           chloroplastic; AltName: Full=Cytochrome b6-f complex
           subunit PetN; AltName: Full=Cytochrome b6-f complex
           subunit VIII; Flags: Precursor
           gi|5902600|gb|AAD55570.1|AF110788_1 unknown [Volvox
           carteri f. nagariensis] gi|300262564|gb|EFJ46770.1|
           subunit of the chloroplast cytochrome b6f complex
           [Volvox carteri f. nagariensis]
          Length = 98

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -2

Query: 265 ELMTVAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           E+  +AEGEP IV +GWA+ C +F+FSLSLVVWGRSGL
Sbjct: 61  EVAMLAEGEPAIVQIGWAATCVMFSFSLSLVVWGRSGL 98


>ref|XP_001698251.1| subunit of the chloroplast cytochrome b6f complex [Chlamydomonas
           reinhardtii] gi|158273749|gb|EDO99536.1| subunit of the
           chloroplast cytochrome b6f complex [Chlamydomonas
           reinhardtii]
          Length = 97

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -2

Query: 265 ELMTVAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           E+  +AEGEP IV +GWA+ C +F+FSLSLVVWGRSGL
Sbjct: 60  EVAMLAEGEPAIVQIGWAATCVMFSFSLSLVVWGRSGL 97


>emb|CEF99789.1| Cytochrome b6-f complex, subunit 8 [Ostreococcus tauri]
          Length = 102

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 253 VAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           VAEGEPFIV V WA++ A F+FSLSLVVWGRSGL
Sbjct: 69  VAEGEPFIVQVAWAAIMATFSFSLSLVVWGRSGL 102


>sp|P0C1D4.2|PETN_CHLRE RecName: Full=Cytochrome b6-f complex subunit 8, chloroplastic;
           AltName: Full=Cytochrome b6-f complex subunit PetN;
           AltName: Full=Cytochrome b6-f complex subunit VIII
          Length = 35

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -2

Query: 253 VAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           +AEGEP IV +GWA+ C +F+FSLSLVVWGRSGL
Sbjct: 2   LAEGEPAIVQIGWAATCVMFSFSLSLVVWGRSGL 35


>ref|XP_001420753.1| subunit PetN of cytochrome b6f complex [Ostreococcus lucimarinus
           CCE9901] gi|144580988|gb|ABO99046.1| subunit PetN of
           cytochrome b6f complex [Ostreococcus lucimarinus
           CCE9901]
          Length = 106

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 253 VAEGEPFIVNVGWASLCAVFTFSLSLVVWGRSGL 152
           VAEGEPFIV V WA++ A F+FSL+LVVWGRSGL
Sbjct: 73  VAEGEPFIVQVAWAAIMATFSFSLALVVWGRSGL 106


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