BLASTX nr result

ID: Ziziphus21_contig00036404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00036404
         (492 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008366152.1| PREDICTED: F-box protein At2g26160-like [Mal...    60   6e-07
ref|XP_008384412.1| PREDICTED: F-box protein At2g26160-like [Mal...    60   6e-07
ref|XP_004288685.1| PREDICTED: F-box protein At4g35733-like [Fra...    58   2e-06

>ref|XP_008366152.1| PREDICTED: F-box protein At2g26160-like [Malus domestica]
           gi|658060622|ref|XP_008366153.1| PREDICTED: F-box
           protein At2g26160-like [Malus domestica]
          Length = 447

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 21/118 (17%)
 Frame = -2

Query: 293 GCLVKAINGDLLLVYRYCYMNDLSLNTC--------KIYKLIYSNRKLECI----PVKTL 150
           G LV++  GDL  + RYC+M +++ + C         +YK ++++ +  CI     VK+L
Sbjct: 305 GYLVESAKGDLFHILRYCWMREVAPDKCFRFRTKGFLVYKWVFNDEEDGCIAHWVEVKSL 364

Query: 149 GSECLFLRCRKSGISILASNYSGYKPNRIY---------NIVYVDAKHQIEVFNLEDG 3
           G E +FL    S +S+LASN++G  PN IY          +   D    + +FNLEDG
Sbjct: 365 GDEAVFLGDNHS-VSVLASNFAGCCPNSIYYTDDFVSGCPLSDGDEPCDMGIFNLEDG 421


>ref|XP_008384412.1| PREDICTED: F-box protein At2g26160-like [Malus domestica]
          Length = 398

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 21/118 (17%)
 Frame = -2

Query: 293 GCLVKAINGDLLLVYRYCYMNDLSLNTC--------KIYKLIYSNRKLECI----PVKTL 150
           G LV++  GDL  + RYC+M +++ + C         +YK ++++ +  CI     VK+L
Sbjct: 256 GYLVESAKGDLFHILRYCWMREVAPDKCFRFRTKGFLVYKWVFNDEEDGCIAHWVEVKSL 315

Query: 149 GSECLFLRCRKSGISILASNYSGYKPNRIY---------NIVYVDAKHQIEVFNLEDG 3
           G E +FL    S +S+LASN++G  PN IY          +   D    + +FNLEDG
Sbjct: 316 GDEAVFLGDNHS-VSVLASNFAGCCPNSIYYTDDFVSGCPLSDGDEPCDMGIFNLEDG 372


>ref|XP_004288685.1| PREDICTED: F-box protein At4g35733-like [Fragaria vesca subsp.
           vesca]
          Length = 380

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
 Frame = -2

Query: 350 YFKMSEIAPAFEDSSCYHKGCLVKAINGDLLLVYRYCYMNDLSLNTCKIYKLIYSNRKLE 171
           YF + +  P      C +    V+   G+LLLV +     ++S  T K+Y+L  ++R L+
Sbjct: 240 YFSLLQTRPKISPKGCTY---FVETTKGNLLLVEKVSARQEVSAATFKVYQL-GTDRSLD 295

Query: 170 C--IPVKTLGSECLFLRCRKSGISILASNYSGYKPNRIYNIVYVDAKHQIEVFNLED 6
              + V ++G E LF+ C  + +S+LASN+ G +PN IY      +  ++ +F+LE+
Sbjct: 296 TQVLEVNSIGDEALFV-CESNSMSVLASNFRGCQPNSIYYAYNRGSTWEMGIFSLEN 351


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