BLASTX nr result

ID: Ziziphus21_contig00033839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00033839
         (271 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008243851.1| PREDICTED: pentatricopeptide repeat-containi...    67   4e-09
ref|XP_007225125.1| hypothetical protein PRUPE_ppa002589mg [Prun...    67   5e-09
ref|XP_004297237.1| PREDICTED: pentatricopeptide repeat-containi...    63   8e-08
ref|XP_008339814.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_004229722.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06

>ref|XP_008243851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Prunus mume]
          Length = 655

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 35/50 (70%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
 Frame = -1

Query: 160 MWKKKLAWLPIRRFSSTPEIPTLYSFLQPSIFALKTD--PSCSSSFSLPT 17
           MW+K L  LP R FSSTPEIPTLYSFLQPS+FALK D  PS  S   LPT
Sbjct: 1   MWRKALTLLPHRPFSSTPEIPTLYSFLQPSVFALKRDLPPSQKSQCDLPT 50


>ref|XP_007225125.1| hypothetical protein PRUPE_ppa002589mg [Prunus persica]
           gi|462422061|gb|EMJ26324.1| hypothetical protein
           PRUPE_ppa002589mg [Prunus persica]
          Length = 655

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/50 (70%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
 Frame = -1

Query: 160 MWKKKLAWLPIRRFSSTPEIPTLYSFLQPSIFALKTD--PSCSSSFSLPT 17
           MW+K L  LP R FSSTPEIPTLYSFLQPS+FALK D  PS  S   LPT
Sbjct: 1   MWRKALTLLPHRPFSSTPEIPTLYSFLQPSVFALKRDLPPSQKSHSDLPT 50


>ref|XP_004297237.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Fragaria vesca subsp. vesca]
          Length = 651

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 31/50 (62%), Positives = 34/50 (68%)
 Frame = -1

Query: 160 MWKKKLAWLPIRRFSSTPEIPTLYSFLQPSIFALKTDPSCSSSFSLPTTK 11
           MW+K    L  R +SS+PEIPTLYSFLQPSIFALKT PS  S    P  K
Sbjct: 1   MWRKAFTLLKRRPYSSSPEIPTLYSFLQPSIFALKTPPSTHSDLPTPPPK 50


>ref|XP_008339814.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Malus domestica] gi|658034878|ref|XP_008352959.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Malus domestica]
          Length = 663

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/58 (65%), Positives = 39/58 (67%), Gaps = 10/58 (17%)
 Frame = -1

Query: 160 MWKKKLAW---LPIRR---FSSTPEIPTLYSFLQPSIFALKTDPSCSSSF----SLPT 17
           MW+K  A    LP RR   FSSTPEIPTLYSFLQPSIFALK DP  SSS      LPT
Sbjct: 1   MWRKLEALTHLLPHRRGRAFSSTPEIPTLYSFLQPSIFALKRDPPPSSSLQSHGDLPT 58


>ref|XP_004229722.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Solanum lycopersicum]
           gi|723660247|ref|XP_010325129.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g69290-like [Solanum lycopersicum]
          Length = 654

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -1

Query: 160 MWKKKLAWLPIRRFSSTPEIPTLYSFLQPSIFALKTDPSCSSSFSLPTTKLP 5
           MW++ L  L  R FSS PEIPTLYSFLQPSIF+LKT  S S++   P  + P
Sbjct: 1   MWRRALCNLSKRPFSSQPEIPTLYSFLQPSIFSLKTTESPSTTPPKPHDQTP 52


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