BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00032980
         (294 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa ...   166   6e-39
gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloropla...   165   1e-38
ref|YP_009136469.1| RNA polymerase beta'' subunit (chloroplast) ...   158   1e-36
ref|YP_008082723.1| RNA polymerase beta' subunit [Prinsepia util...   158   1e-36
gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana]       158   2e-36
gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]        157   3e-36
gb|AEI27559.1| RNA polymerase beta subunit [Dryas octopetala]         157   4e-36
gb|AKC99763.1| RNA polymerase beta'' subunit (chloroplast) [Prun...   156   5e-36
ref|YP_009136385.1| RNA polymerase beta'' subunit (chloroplast) ...   156   5e-36
ref|YP_009136301.1| RNA polymerase beta'' subunit (chloroplast) ...   156   5e-36
ref|YP_009024671.1| RNA polymerase beta' subunit (chloroplast) [...   156   5e-36
ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prun...   156   5e-36
ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa]...   156   5e-36
ref|YP_004842229.1| RNA polymerase beta' subunit [Pyrus pyrifoli...   156   5e-36
ref|YP_004021655.1| RNA polymerase beta' subunit [Prunus persica...   156   5e-36
gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloropla...   154   3e-35
ref|YP_004072452.1| RNA polymerase beta II subunit [Corynocarpus...   153   4e-35
gb|ABV65723.1| RNA polymerase beta'' subunit, partial (chloropla...   153   4e-35
gb|AHF71996.1| DNA-directed RNA polymerase beta'' chain (chlorop...   152   1e-34
gb|ABV65749.1| RNA polymerase beta'' subunit, partial (chloropla...   152   1e-34

>gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa var. robusta]
          Length = 1254

 Score =  166 bits (420), Expect = 6e-39
 Identities = 85/98 (86%), Positives = 85/98 (86%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL
Sbjct: 549 REKELMPRPTISIEIPINGIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 608

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 609 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 646


>gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ceanothus
           prostratus]
          Length = 1281

 Score =  165 bits (418), Expect = 1e-38
 Identities = 84/98 (85%), Positives = 85/98 (86%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDL+
Sbjct: 563 REKELMPHSTISIEIPINGIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLI 622

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 623 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 660


>ref|YP_009136469.1| RNA polymerase beta'' subunit (chloroplast) [Prunus padus]
           gi|808178349|gb|AKC99679.1| RNA polymerase beta''
           subunit (chloroplast) [Prunus padus]
          Length = 1368

 Score =  158 bits (400), Expect = 1e-36
 Identities = 80/98 (81%), Positives = 83/98 (84%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+SILKKEDL+
Sbjct: 585 REKELMPRPSISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSILKKEDLI 644

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 645 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 682


>ref|YP_008082723.1| RNA polymerase beta' subunit [Prinsepia utilis]
           gi|501418813|gb|AGL94690.1| RNA polymerase beta' subunit
           [Prinsepia utilis]
          Length = 1384

 Score =  158 bits (400), Expect = 1e-36
 Identities = 80/98 (81%), Positives = 83/98 (84%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+SILKKEDL+
Sbjct: 587 REKELMTRPSISIEIPKNGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSILKKEDLI 646

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 647 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 684


>gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana]
          Length = 1246

 Score =  158 bits (399), Expect = 2e-36
 Identities = 81/98 (82%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REK+LM             IFRR  IFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL
Sbjct: 549 REKDLMRHSTISIEIPINGIFRRKSIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 608

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQ KVDRFFFIPEEVHILPESSSIMVR
Sbjct: 609 EYRGVKEFKPKYQTKVDRFFFIPEEVHILPESSSIMVR 646


>gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]
          Length = 1258

 Score =  157 bits (397), Expect = 3e-36
 Identities = 79/98 (80%), Positives = 83/98 (84%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+SILKK+DL+
Sbjct: 547 REKELMPRPGISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSILKKDDLI 606

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 607 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 644


>gb|AEI27559.1| RNA polymerase beta subunit [Dryas octopetala]
          Length = 1258

 Score =  157 bits (396), Expect = 4e-36
 Identities = 79/98 (80%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRK SGITKYGT+GL+SILKKEDL+
Sbjct: 549 REKELMPRPGISIEIPINGIFRRNSILAYFDDPQYRRKGSGITKYGTVGLHSILKKEDLI 608

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 609 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 646


>gb|AKC99763.1| RNA polymerase beta'' subunit (chloroplast) [Prunus serrulata var.
           spontanea]
          Length = 1368

 Score =  156 bits (395), Expect = 5e-36
 Identities = 79/98 (80%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+S LKKEDL+
Sbjct: 585 REKELMPRPSISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSTLKKEDLI 644

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 645 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 682


>ref|YP_009136385.1| RNA polymerase beta'' subunit (chloroplast) [Prunus maximowiczii]
           gi|808178264|gb|AKC99595.1| RNA polymerase beta''
           subunit (chloroplast) [Prunus maximowiczii]
          Length = 1368

 Score =  156 bits (395), Expect = 5e-36
 Identities = 79/98 (80%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+S LKKEDL+
Sbjct: 585 REKELMPRPSISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSTLKKEDLI 644

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 645 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 682


>ref|YP_009136301.1| RNA polymerase beta'' subunit (chloroplast) [Prunus yedoensis]
           gi|808178179|gb|AKC99511.1| RNA polymerase beta''
           subunit (chloroplast) [Prunus yedoensis]
           gi|808178519|gb|AKC99847.1| RNA polymerase beta''
           subunit (chloroplast) [Prunus subhirtella var.
           subhirtella] gi|808178604|gb|AKC99931.1| RNA polymerase
           beta'' subunit (chloroplast) [Prunus subhirtella var.
           subhirtella]
          Length = 1368

 Score =  156 bits (395), Expect = 5e-36
 Identities = 79/98 (80%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+S LKKEDL+
Sbjct: 585 REKELMPRPSISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSTLKKEDLI 644

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 645 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 682


>ref|YP_009024671.1| RNA polymerase beta' subunit (chloroplast) [Prunus kansuensis]
           gi|597569096|gb|AHN13527.1| RNA polymerase beta' subunit
           (chloroplast) [Prunus kansuensis]
          Length = 1368

 Score =  156 bits (395), Expect = 5e-36
 Identities = 79/98 (80%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+S LKKEDL+
Sbjct: 585 REKELMPRPSISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSTLKKEDLI 644

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 645 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 682


>ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prunus mume]
           gi|589061043|gb|AHK26864.1| RNA polymerase beta' subunit
           (plastid) [Prunus mume]
          Length = 1368

 Score =  156 bits (395), Expect = 5e-36
 Identities = 79/98 (80%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+S LKKEDL+
Sbjct: 585 REKELMPRPSISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSTLKKEDLI 644

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 645 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 682


>ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa]
           gi|565666455|emb|CDI73555.1| RNA polymerase beta'
           subunit [Pyrus spinosa]
          Length = 1373

 Score =  156 bits (395), Expect = 5e-36
 Identities = 80/98 (81%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGTIGL+SILKKEDL+
Sbjct: 588 REKELMPRPGISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTIGLHSILKKEDLI 647

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQ KVDRFFFIPEEVHILPESSSIMVR
Sbjct: 648 EYRGVKEFKPKYQTKVDRFFFIPEEVHILPESSSIMVR 685


>ref|YP_004842229.1| RNA polymerase beta' subunit [Pyrus pyrifolia]
           gi|345433551|dbj|BAK69373.1| RNA polymerase beta'
           subunit [Pyrus pyrifolia]
          Length = 1373

 Score =  156 bits (395), Expect = 5e-36
 Identities = 80/98 (81%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGTIGL+SILKKEDL+
Sbjct: 588 REKELMPRPGISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTIGLHSILKKEDLI 647

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQ KVDRFFFIPEEVHILPESSSIMVR
Sbjct: 648 EYRGVKEFKPKYQTKVDRFFFIPEEVHILPESSSIMVR 685


>ref|YP_004021655.1| RNA polymerase beta' subunit [Prunus persica]
           gi|309321424|gb|ADO64965.1| RNA polymerase beta' subunit
           [Prunus persica]
          Length = 1368

 Score =  156 bits (395), Expect = 5e-36
 Identities = 79/98 (80%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+S LKKEDL+
Sbjct: 585 REKELMPRPSISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSTLKKEDLI 644

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 645 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 682


>gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloroplast) [Eucryphia
           lucida]
          Length = 1280

 Score =  154 bits (389), Expect = 3e-35
 Identities = 78/98 (79%), Positives = 83/98 (84%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN IFAYFDDPQYRRKSSGITKYGTIG++SI+KKEDL+
Sbjct: 558 REKELMPRSGISIEIPISGIFRRNSIFAYFDDPQYRRKSSGITKYGTIGVHSIVKKEDLI 617

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEV+ILPE SSIMVR
Sbjct: 618 EYRGVKEFKPKYQMKVDRFFFIPEEVYILPEYSSIMVR 655


>ref|YP_004072452.1| RNA polymerase beta II subunit [Corynocarpus laevigata]
           gi|309252880|gb|ADO60300.1| RNA polymerase beta II
           subunit (chloroplast) [Corynocarpus laevigata]
          Length = 1380

 Score =  153 bits (387), Expect = 4e-35
 Identities = 77/98 (78%), Positives = 82/98 (83%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKEL+             IFRRN I AYFDDPQY+R SSGITKYGTIG++SILKKEDL+
Sbjct: 577 REKELLPLSGISIEIPINGIFRRNSILAYFDDPQYKRNSSGITKYGTIGVHSILKKEDLI 636

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR
Sbjct: 637 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 674


>gb|ABV65723.1| RNA polymerase beta'' subunit, partial (chloroplast) [Connarus
           conchocarpus]
          Length = 1277

 Score =  153 bits (387), Expect = 4e-35
 Identities = 77/98 (78%), Positives = 83/98 (84%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFRRN IFAYFDDPQYRRKSSGITKYGTIG++SI+KKEDL+
Sbjct: 558 REKELMPRSDISIEIPISGIFRRNSIFAYFDDPQYRRKSSGITKYGTIGVHSIVKKEDLI 617

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQ+KVDRFFFIPEEV+I PESSSIMVR
Sbjct: 618 EYRGVKEFKPKYQIKVDRFFFIPEEVYIFPESSSIMVR 655


>gb|AHF71996.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Rosa
           odorata var. gigantea]
          Length = 1384

 Score =  152 bits (384), Expect = 1e-34
 Identities = 77/98 (78%), Positives = 81/98 (82%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           +EKE M             IFRRN I AYFDDPQYRRKSSGITKYGT+GL+SILKKEDL+
Sbjct: 584 QEKERMPRPDISIEIPINGIFRRNSILAYFDDPQYRRKSSGITKYGTVGLHSILKKEDLI 643

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQ KVDRFFFIPEEVHILPESSSIMVR
Sbjct: 644 EYRGVKEFKPKYQTKVDRFFFIPEEVHILPESSSIMVR 681


>gb|ABV65749.1| RNA polymerase beta'' subunit, partial (chloroplast) [Juglans
           nigra]
          Length = 1268

 Score =  152 bits (384), Expect = 1e-34
 Identities = 75/98 (76%), Positives = 83/98 (84%)
 Frame = -1

Query: 294 REKELMXXXXXXXXXXXXXIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLL 115
           REKELM             IFR+N I AYFDDPQYR+K+SGITKYGTIG++SILKKEDL+
Sbjct: 555 REKELMPPSGISIEIPVNGIFRKNSILAYFDDPQYRKKNSGITKYGTIGVHSILKKEDLI 614

Query: 114 EYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVR 1
           EYRGVKEFKPKYQMK+DRFFFIPEEVHILPESSSIMV+
Sbjct: 615 EYRGVKEFKPKYQMKIDRFFFIPEEVHILPESSSIMVQ 652