BLASTX nr result
ID: Ziziphus21_contig00032817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00032817
(729 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73911.1| polyprotein [Citrus sinensis] 110 7e-22
gb|AFB73912.1| polyprotein [Citrus sinensis] 108 4e-21
gb|KOM55676.1| hypothetical protein LR48_Vigan10g156800 [Vigna a... 100 2e-18
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 99 2e-18
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 99 2e-18
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 97 1e-17
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 97 1e-17
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 96 2e-17
gb|AFK47227.1| unknown [Lotus japonicus] 96 3e-17
gb|KOM49095.1| hypothetical protein LR48_Vigan07g279900 [Vigna a... 94 1e-16
emb|CDY02901.1| BnaC04g25850D [Brassica napus] 94 1e-16
gb|KNA08435.1| hypothetical protein SOVF_162690, partial [Spinac... 91 8e-16
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 91 1e-15
emb|CAJ76058.1| gag protein [Cucumis melo] 73 2e-10
ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 69 4e-09
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 57 1e-08
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 58 1e-08
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 58 1e-08
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 58 2e-08
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 58 2e-08
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 110 bits (276), Expect = 7e-22
Identities = 61/90 (67%), Positives = 68/90 (75%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA KY+IE NGNNFSLW M +K VLRK+ C AAI E P+E D+ KW E+ GNAI +LH
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDGNAISDLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYEA 339
LALAD VL VAEK T KEI DTLTKLYEA
Sbjct: 60 LALADGVLSSVAEKNTAKEIWDTLTKLYEA 89
Score = 84.7 bits (208), Expect = 6e-14
Identities = 50/109 (45%), Positives = 66/109 (60%)
Frame = +3
Query: 303 RNIGHFDKIV*GLNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLR 482
R IG + V GL KNLLSLGQ+D++G KT + +GIMKI++GALV+MK +KI NL++L+
Sbjct: 346 RTIGEV-RHVNGLKKNLLSLGQMDSHGYKTHVENGIMKIVKGALVLMKVEKIGANLFMLK 404
Query: 483 GETQQGGXXXXXXXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*GSK 629
GET Q WH KLGHMS + + L + L G K
Sbjct: 405 GETLQ--EADACVASNGEESTMMWHLKLGHMSEQGLKILSERKLLPGLK 451
Score = 62.0 bits (149), Expect = 4e-07
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFSNLILEAK 712
E GLKIL+E+KL+ GLK VSLPFC+ CV SKQHRL FS I +K
Sbjct: 435 EQGLKILSERKLLPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSK 479
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 108 bits (270), Expect = 4e-21
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA KY+IE NGNNFSLW M +K VLRK+ C AAI E P+E D+ KW E+ NAI +LH
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDSNAISDLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYEA 339
LALAD VL VAEK T KEI DTLTKLYEA
Sbjct: 60 LALADGVLSSVAEKNTAKEIWDTLTKLYEA 89
Score = 88.6 bits (218), Expect = 4e-15
Identities = 48/98 (48%), Positives = 63/98 (64%)
Frame = +3
Query: 336 GLNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXX 515
GL KNLLSLGQ+D++GCKT + +GIMKI++GALV+MKA+KI NL++L+GET Q
Sbjct: 356 GLKKNLLSLGQMDSHGCKTHVENGIMKIVKGALVLMKAEKICANLFMLKGETLQ--EADA 413
Query: 516 XXXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*GSK 629
WH KLGHMS + + L + L G K
Sbjct: 414 CVASNGEESTMMWHLKLGHMSEQGLKILSERKLPPGLK 451
Score = 60.1 bits (144), Expect = 1e-06
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFSNLILEAK 712
E GLKIL+E+KL GLK VSLPFC+ CV SKQHRL FS I +K
Sbjct: 435 EQGLKILSERKLPPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSK 479
>gb|KOM55676.1| hypothetical protein LR48_Vigan10g156800 [Vigna angularis]
Length = 120
Score = 99.8 bits (247), Expect = 2e-18
Identities = 51/89 (57%), Positives = 63/89 (70%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
M K++IE NGNNFSLW + I+ +LRKD C AI++ E + + KW EM NA+ NLH
Sbjct: 1 MTAKFEIEKFNGNNFSLWKLKIRAILRKDNCLDAIEDRRAE-ISDEKWKEMDDNAVANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
LA+AD VL +AEKKT KEI DTL KLYE
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYE 88
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 99.4 bits (246), Expect = 2e-18
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++IE NG NFSLW + I+ +LRKD C AI P + D KW EM NA+ NLH
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADITDE-KWKEMDDNAVANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
LA+AD VL +AEKKT KEI DTL KLYE
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYE 88
Score = 79.0 bits (193), Expect = 3e-12
Identities = 44/104 (42%), Positives = 60/104 (57%)
Frame = +3
Query: 336 GLNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXX 515
GL KNLLS+GQLD+ GCK GI+K+++G LV+MKA+KI +NLY+L G+T Q
Sbjct: 355 GLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEA-DAS 413
Query: 516 XXXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*GSKRFHYHF 647
WH +LGHMS + L ++L G K + F
Sbjct: 414 VAASSQEETTMMWHQRLGHMSERGLKVLAERNLLHGLKAVNLPF 457
Score = 59.3 bits (142), Expect = 2e-06
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFSNLILEAK 712
E GLK+LAE+ L+ GLK V+LPFC+ CVISKQHRL F+ + +K
Sbjct: 435 ERGLKVLAERNLLHGLKAVNLPFCEHCVISKQHRLKFARVTTRSK 479
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 99.4 bits (246), Expect = 2e-18
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++IE NG NFSLW + I+ +LRKD C AI P + D KW EM NA+ NLH
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADITDE-KWKEMDDNAVANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
LA+AD VL +AEKKT KEI DTL KLYE
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYE 88
Score = 79.7 bits (195), Expect = 2e-12
Identities = 44/104 (42%), Positives = 61/104 (58%)
Frame = +3
Query: 336 GLNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXX 515
GL KNLLS+GQLD+ GCK GI+K+++G LV+MKA+KI +NLY+L G+T Q
Sbjct: 355 GLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEA-DAS 413
Query: 516 XXXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*GSKRFHYHF 647
WH +LGHMS + L+ ++L G K + F
Sbjct: 414 VAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPF 457
Score = 57.8 bits (138), Expect = 7e-06
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFSNLILEAK 712
E GLK+L E+ L+ GLK V+LPFC+ CVISKQHRL F+ + +K
Sbjct: 435 ERGLKVLVERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRSK 479
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 97.1 bits (240), Expect = 1e-17
Identities = 50/89 (56%), Positives = 63/89 (70%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++IE NG NFSLW + I+ +LRKD C AI + + ++ + KW EM NA+ NLH
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAI-DGRLADITDEKWKEMDDNAVANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
LA+AD VL +AEKKT KEI DTL KLYE
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYE 88
Score = 79.7 bits (195), Expect = 2e-12
Identities = 44/104 (42%), Positives = 61/104 (58%)
Frame = +3
Query: 336 GLNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXX 515
GL KNLLS+GQLD+ GCK GI+K+++G LV+MKA+KI +NLY+L G+T Q
Sbjct: 355 GLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEA-DAS 413
Query: 516 XXXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*GSKRFHYHF 647
WH +LGHMS + L+ ++L G K + F
Sbjct: 414 VAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPF 457
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 97.1 bits (240), Expect = 1e-17
Identities = 51/89 (57%), Positives = 60/89 (67%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++IE NG FSLW + I+ +LRKD C AI P + D KW EM NA+ NLH
Sbjct: 1 MAAKFEIEKFNGRKFSLWKLKIRAILRKDNCLDAIDGRPADITDE-KWKEMDDNAVANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
LA+AD VL +AEKKT KEI DTL KLYE
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYE 88
Score = 79.3 bits (194), Expect = 2e-12
Identities = 44/104 (42%), Positives = 61/104 (58%)
Frame = +3
Query: 336 GLNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXX 515
GL KNLLS+GQLD+ GCK GI+K+++G LV+MKA+KI +NLY+L G+T Q
Sbjct: 355 GLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEA-DAS 413
Query: 516 XXXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*GSKRFHYHF 647
WH +LGHMS + L+ ++L G K + F
Sbjct: 414 VAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPF 457
Score = 57.8 bits (138), Expect = 7e-06
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFSNLILEAK 712
E GLK+L E+ L+ GLK V+LPFC+ CVISKQHRL F+ + +K
Sbjct: 435 ERGLKVLVERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRSK 479
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 96.3 bits (238), Expect = 2e-17
Identities = 47/90 (52%), Positives = 63/90 (70%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++IE NG NFSLW + +K +LRKD C AAI E P++ D+ KW EM +A+ +L+
Sbjct: 1 MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLY 60
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYEA 339
L++AD VL + EKKT EI D L +LYEA
Sbjct: 61 LSIADGVLSSIEEKKTANEIWDHLNRLYEA 90
Score = 77.4 bits (189), Expect = 9e-12
Identities = 44/96 (45%), Positives = 56/96 (58%)
Frame = +3
Query: 336 GLNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXX 515
GL KNLLS G LDN+ + G+MKI QGALV+MK +KIA NLY+L+GET Q
Sbjct: 346 GLKKNLLSYGILDNSATQIETQKGVMKIFQGALVVMKGEKIAANLYMLKGETLQ--EAEA 403
Query: 516 XXXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*G 623
WH KLGHMS++ + L+ + L G
Sbjct: 404 SVAACSPDSTLLWHQKLGHMSDQGMKILVEQKLIPG 439
>gb|AFK47227.1| unknown [Lotus japonicus]
Length = 107
Score = 95.5 bits (236), Expect = 3e-17
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++I +G+NFSLW + IK +LRKD C AI P + D+ KW EM NA+ NLH
Sbjct: 1 MAAKFEIPKFSGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDD-KWKEMDDNAVANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
LA+AD VL +AEKKT KEI DTL +LYE
Sbjct: 60 LAVADSVLSSIAEKKTAKEIWDTLIQLYE 88
>gb|KOM49095.1| hypothetical protein LR48_Vigan07g279900 [Vigna angularis]
Length = 270
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/89 (53%), Positives = 61/89 (68%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
M KY++E NGNNF+LW + +K +LRKD C AAI+ E + KW E+ NAI NLH
Sbjct: 1 MTTKYELERFNGNNFALWKLKMKAILRKDNCIAAIEGKSAEMTEQ-KWREIDNNAIANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
L++AD VL VAEK+T +EI D L KLYE
Sbjct: 60 LSMADSVLSSVAEKETAREIWDALIKLYE 88
>emb|CDY02901.1| BnaC04g25850D [Brassica napus]
Length = 265
Score = 93.6 bits (231), Expect = 1e-16
Identities = 49/90 (54%), Positives = 60/90 (66%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++IE NG+NF+L + +K +LRKD C A I P ++ KW EM GNA+ NLH
Sbjct: 1 MAAKFEIEKFNGSNFALCKLKMKAILRKDGCLATISARPATYTNDDKWNEMDGNAMANLH 60
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYEA 339
LALAD VL + EK T KEI D L KLYEA
Sbjct: 61 LALADGVLSSIEEKNTAKEIWDHLAKLYEA 90
>gb|KNA08435.1| hypothetical protein SOVF_162690, partial [Spinacia oleracea]
Length = 260
Score = 90.9 bits (224), Expect = 8e-16
Identities = 50/71 (70%), Positives = 53/71 (74%)
Frame = +1
Query: 127 M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLHLALADEVL*IVAEKKTTKE 306
M IK +LRKD C AA +E P E DN KW EM GNAI NLHLALAD VL VAEKKT KE
Sbjct: 1 MKIKAILRKDNCLAANEERPTEITDNVKWNEMDGNAISNLHLALADGVLSSVAEKKTAKE 60
Query: 307 I*DTLTKLYEA 339
I +TLTKLYEA
Sbjct: 61 IWNTLTKLYEA 71
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 90.5 bits (223), Expect = 1e-15
Identities = 49/89 (55%), Positives = 61/89 (68%)
Frame = +1
Query: 70 MAVKYKIENLNGNNFSLW*M*IKVVLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLH 249
MA K++I NG+NFSLW + IK +LRKD C AI P + D+ K EM NA+ NLH
Sbjct: 1 MAAKFEIPKFNGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDD-KRKEMDDNAVANLH 59
Query: 250 LALADEVL*IVAEKKTTKEI*DTLTKLYE 336
LA+AD VL +AEKKT K+I DTL +LYE
Sbjct: 60 LAVADSVLSSIAEKKTAKKIWDTLIQLYE 88
Score = 74.3 bits (181), Expect = 7e-11
Identities = 43/97 (44%), Positives = 58/97 (59%)
Frame = +3
Query: 339 LNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXXX 518
L KNLLS+GQLD+ G K I GI+K+++G+LV+MKAKK+A NLY+L G+T Q
Sbjct: 356 LAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLYMLLGDTWQMA-DASV 414
Query: 519 XXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*GSK 629
WH +LGHMS + L ++L G K
Sbjct: 415 AVGSQEETTMMWHRRLGHMSERGLKVLAERNLIPGLK 451
Score = 60.5 bits (145), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFSNLILEAK 712
E GLK+LAE+ LI GLK VSLPFC+ CVISKQHRL F+ +K
Sbjct: 435 ERGLKVLAERNLIPGLKSVSLPFCEHCVISKQHRLKFAKSTARSK 479
>emb|CAJ76058.1| gag protein [Cucumis melo]
Length = 122
Score = 72.8 bits (177), Expect = 2e-10
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = +1
Query: 142 VLRKDKCFAAIKETPIENVDNGKW*EMVGNAIVNLHLALADEVL*IVAEKKTTKEI*DTL 321
+ RKD C AI + P E D+ KW EM GNA+ N+HLAL D VL + EKK KEI D L
Sbjct: 1 ISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHL 60
Query: 322 TKLYEA 339
KLYEA
Sbjct: 61 IKLYEA 66
>ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104588258
[Nelumbo nucifera]
Length = 2014
Score = 68.6 bits (166), Expect = 4e-09
Identities = 38/95 (40%), Positives = 52/95 (54%)
Frame = +3
Query: 339 LNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXXX 518
L KNL+SLG LD++GC+ G++K+ +G LV+MKA K+ LY+LRG T
Sbjct: 736 LKKNLISLGTLDSSGCRYSAEGGVLKVTKGTLVVMKANKVG-RLYVLRGSTVIESSALAS 794
Query: 519 XXXXXXXXXXXWHSKLGHMSNEV*RFLLNKSLF*G 623
WH +LGHMS + FL +SL G
Sbjct: 795 SSMSKEDLTKMWHMRLGHMSEKRMTFLSKRSLLCG 829
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 57.4 bits (137), Expect(2) = 1e-08
Identities = 33/90 (36%), Positives = 50/90 (55%)
Frame = +3
Query: 339 LNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXXX 518
+ +NL+SLG L++ GC DGI+KI++G ++K +K T LY+L G T++G
Sbjct: 350 MTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDT-LYILDGVTEEG---ESH 405
Query: 519 XXXXXXXXXXXWHSKLGHMSNEV*RFLLNK 608
WHS+LGHMS + L+ K
Sbjct: 406 SSAEVKDETALWHSRLGHMSQKGMEILVKK 435
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 584 GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFS 691
G++IL ++ + L FC+ CV KQHR++F+
Sbjct: 428 GMEILVKKGCLRREVIKELEFCEDCVYGKQHRVSFA 463
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 58.2 bits (139), Expect(2) = 1e-08
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +3
Query: 339 LNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXXX 518
L ++L+SL LD G K DGI+K+ +G+LV+MKA + NLY LRG T G
Sbjct: 400 LKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 459
Query: 519 XXXXXXXXXXXWHSKLGHMS 578
WH +LGHMS
Sbjct: 460 DSLSNSDATNLWHMRLGHMS 479
Score = 28.9 bits (63), Expect(2) = 1e-08
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFS 691
E GL L++++L+ G L FC+ C+ K R+ F+
Sbjct: 480 EIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFN 517
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 58.2 bits (139), Expect(2) = 1e-08
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +3
Query: 339 LNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXXX 518
L ++L+SL LD G K DGI+K+ +G+LV+MKA + NLY LRG T G
Sbjct: 400 LKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 459
Query: 519 XXXXXXXXXXXWHSKLGHMS 578
WH +LGHMS
Sbjct: 460 DSLSNSDATNLWHMRLGHMS 479
Score = 28.9 bits (63), Expect(2) = 1e-08
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFS 691
E GL L++++L+ G L FC+ C+ K R+ F+
Sbjct: 480 EIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFN 517
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 58.2 bits (139), Expect(2) = 2e-08
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +3
Query: 339 LNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXXX 518
L ++L+SL LD G K DGI+K+ +G+LV+MKA + NLY LRG T G
Sbjct: 197 LKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 256
Query: 519 XXXXXXXXXXXWHSKLGHMS 578
WH +LGHMS
Sbjct: 257 DSLSNSDATNLWHMRLGHMS 276
Score = 27.7 bits (60), Expect(2) = 2e-08
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFS 691
E GL L+++ L+ G L FC+ C+ K R+ F+
Sbjct: 277 EIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFN 314
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 58.2 bits (139), Expect(2) = 2e-08
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +3
Query: 339 LNKNLLSLGQLDNNGCKTLI*DGIMKIIQGALVMMKAKKIATNLYLLRGETQQGGXXXXX 518
L ++L+SL LD G K DGI+K+ +G+LV+MKA + NLY LRG T G
Sbjct: 197 LKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 256
Query: 519 XXXXXXXXXXXWHSKLGHMS 578
WH +LGHMS
Sbjct: 257 DSLSNSDATNLWHMRLGHMS 276
Score = 27.7 bits (60), Expect(2) = 2e-08
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 578 E*GLKILAEQKLILGLKKVSLPFCKRCVISKQHRLNFS 691
E GL L+++ L+ G L FC+ C+ K R+ F+
Sbjct: 277 EIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFN 314