BLASTX nr result
ID: Ziziphus21_contig00031238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00031238
(557 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010091160.1| hypothetical protein L484_013952 [Morus nota... 105 1e-20
emb|CBI36552.3| unnamed protein product [Vitis vinifera] 102 9e-20
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi... 102 9e-20
ref|XP_008243021.1| PREDICTED: pentatricopeptide repeat-containi... 102 1e-19
ref|XP_009358417.1| PREDICTED: pentatricopeptide repeat-containi... 101 3e-19
ref|XP_008394295.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
ref|XP_009366209.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
ref|XP_008362867.1| PREDICTED: pentatricopeptide repeat-containi... 98 3e-18
gb|KDO62295.1| hypothetical protein CISIN_1g044131mg [Citrus sin... 97 5e-18
ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containi... 97 5e-18
ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citr... 97 5e-18
ref|XP_004288724.2| PREDICTED: pentatricopeptide repeat-containi... 95 2e-17
emb|CDP02835.1| unnamed protein product [Coffea canephora] 95 3e-17
ref|XP_010273676.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
ref|XP_010273675.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
ref|XP_002533229.1| pentatricopeptide repeat-containing protein,... 91 3e-16
ref|XP_010447678.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-16
ref|XP_010432951.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-16
ref|XP_012442301.1| PREDICTED: pentatricopeptide repeat-containi... 90 8e-16
ref|NP_194799.1| pentatricopeptide repeat-containing protein [Ar... 89 1e-15
>ref|XP_010091160.1| hypothetical protein L484_013952 [Morus notabilis]
gi|587852815|gb|EXB42930.1| hypothetical protein
L484_013952 [Morus notabilis]
Length = 781
Score = 105 bits (262), Expect = 1e-20
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
A ++ +L+QTHAQ I+HGLQNDLA +TKLTHKLSDLKAIRQA LFLT PNPD FL+NVL
Sbjct: 18 AGTLPELSQTHAQAIVHGLQNDLAFLTKLTHKLSDLKAIRQACDLFLTVPNPDLFLFNVL 77
Query: 30 IRGFSSNDSP 1
++GFS+N SP
Sbjct: 78 LKGFSTNKSP 87
>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 102 bits (255), Expect = 9e-20
Identities = 52/69 (75%), Positives = 57/69 (82%)
Frame = -3
Query: 207 TSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVLI 28
+++ QLNQTHAQIIL+GL NDL TVTKLTHKLS LKAI QA LF T PNPD FLYNVLI
Sbjct: 21 STLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLI 80
Query: 27 RGFSSNDSP 1
R FS N+SP
Sbjct: 81 RAFSLNNSP 89
>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 102 bits (255), Expect = 9e-20
Identities = 52/69 (75%), Positives = 57/69 (82%)
Frame = -3
Query: 207 TSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVLI 28
+++ QLNQTHAQIIL+GL NDL TVTKLTHKLS LKAI QA LF T PNPD FLYNVLI
Sbjct: 21 STLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLI 80
Query: 27 RGFSSNDSP 1
R FS N+SP
Sbjct: 81 RAFSLNNSP 89
>ref|XP_008243021.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Prunus mume]
Length = 788
Score = 102 bits (254), Expect = 1e-19
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
ATS+S L QTHAQIIL+G Q+DLA VTKLTHK SDLKAIR + LFL+ P PD FL+NVL
Sbjct: 25 ATSLSHLTQTHAQIILNGYQDDLAAVTKLTHKFSDLKAIRHSRDLFLSIPKPDLFLFNVL 84
Query: 30 IRGFSSNDSP 1
IRGF+SN SP
Sbjct: 85 IRGFASNASP 94
>ref|XP_009358417.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Pyrus x bretschneideri]
Length = 789
Score = 101 bits (251), Expect = 3e-19
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = -3
Query: 207 TSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVLI 28
T +SQL QTHAQIIL+G QNDLATVTKLTHK SDLKA+R A LFL+ P PD FL+NV+I
Sbjct: 27 TCLSQLTQTHAQIILNGYQNDLATVTKLTHKFSDLKAMRNARDLFLSIPRPDLFLFNVVI 86
Query: 27 RGFSSNDSP 1
RGF++N +P
Sbjct: 87 RGFAANAAP 95
>ref|XP_008394295.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Malus domestica]
Length = 789
Score = 100 bits (250), Expect = 4e-19
Identities = 49/70 (70%), Positives = 58/70 (82%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
AT +S L QTHAQIIL+G QNDLATVTKLTHK SDLKA+R A LFL+ P PD FL+NV+
Sbjct: 26 ATCLSHLTQTHAQIILNGYQNDLATVTKLTHKFSDLKAMRNARDLFLSIPRPDLFLFNVV 85
Query: 30 IRGFSSNDSP 1
IRGF++N +P
Sbjct: 86 IRGFAANAAP 95
>ref|XP_009366209.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Pyrus x bretschneideri]
Length = 789
Score = 99.0 bits (245), Expect = 1e-18
Identities = 48/70 (68%), Positives = 57/70 (81%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
AT +S L QTHAQIIL+G QNDLA VTKLTHK SDLKA+R A LFL+ P PD FL+NV+
Sbjct: 26 ATCLSHLTQTHAQIILNGYQNDLAAVTKLTHKFSDLKAMRHARDLFLSIPRPDLFLFNVV 85
Query: 30 IRGFSSNDSP 1
IRGF++N +P
Sbjct: 86 IRGFAANAAP 95
>ref|XP_008362867.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Malus domestica]
Length = 789
Score = 97.8 bits (242), Expect = 3e-18
Identities = 48/70 (68%), Positives = 57/70 (81%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
AT +S L QTHAQIIL+G QNDLATVTKLTHK SDLKA+R A LFL+ PD FL+NV+
Sbjct: 26 ATCLSHLTQTHAQIILNGYQNDLATVTKLTHKFSDLKAMRHARDLFLSIARPDLFLFNVV 85
Query: 30 IRGFSSNDSP 1
IRGF++N +P
Sbjct: 86 IRGFAANAAP 95
>gb|KDO62295.1| hypothetical protein CISIN_1g044131mg [Citrus sinensis]
Length = 784
Score = 97.1 bits (240), Expect = 5e-18
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
A + SQL QTHAQII+HG QNDL+TVTKL H+LSD KA A ALF + P PD FL+NV+
Sbjct: 19 AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVI 78
Query: 30 IRGFSSNDSP 1
IRGFS+N+ P
Sbjct: 79 IRGFSNNEMP 88
>ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Citrus sinensis]
Length = 784
Score = 97.1 bits (240), Expect = 5e-18
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
A + SQL QTHAQII+HG QNDL+TVTKL H+LSD KA A ALF + P PD FL+NV+
Sbjct: 19 AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVI 78
Query: 30 IRGFSSNDSP 1
IRGFS+N+ P
Sbjct: 79 IRGFSNNEMP 88
>ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citrus clementina]
gi|557556782|gb|ESR66796.1| hypothetical protein
CICLE_v10007511mg [Citrus clementina]
Length = 784
Score = 97.1 bits (240), Expect = 5e-18
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
A + SQL QTHAQII+HG QNDL+TVTKL H+LSD KA A ALF + P PD FL+NV+
Sbjct: 19 AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVI 78
Query: 30 IRGFSSNDSP 1
IRGFS+N+ P
Sbjct: 79 IRGFSNNEMP 88
>ref|XP_004288724.2| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Fragaria vesca subsp. vesca]
Length = 806
Score = 95.1 bits (235), Expect = 2e-17
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
AT++S L QTHAQIIL+G QNDL +TKLTHK SDLKAIR A L + P PD FL+NVL
Sbjct: 43 ATTLSHLTQTHAQIILNGYQNDLVIITKLTHKFSDLKAIRHARDLVFSFPKPDLFLFNVL 102
Query: 30 IRGFSSNDSP 1
I+GF++N SP
Sbjct: 103 IKGFAANASP 112
>emb|CDP02835.1| unnamed protein product [Coffea canephora]
Length = 793
Score = 94.7 bits (234), Expect = 3e-17
Identities = 48/72 (66%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Frame = -3
Query: 207 TSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPN---PDRFLYN 37
T++SQLNQTHAQ+IL+GL DL +TKLTHKL D+KAI QA LF + N PD+FLYN
Sbjct: 27 TNLSQLNQTHAQVILNGLSKDLIAITKLTHKLFDVKAISQAKLLFTSLSNQIPPDKFLYN 86
Query: 36 VLIRGFSSNDSP 1
VLIRGFS N SP
Sbjct: 87 VLIRGFSQNKSP 98
>ref|XP_010273676.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
isoform X2 [Nelumbo nucifera]
Length = 786
Score = 91.3 bits (225), Expect = 3e-16
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
A++++Q NQ HAQ+IL+GL NDL TVTKLT KL+D AI QAH LF T PD FL+NVL
Sbjct: 24 ASTINQFNQIHAQVILNGLHNDLITVTKLTQKLADFGAIDQAHLLFSTISEPDLFLFNVL 83
Query: 30 IRGFSSNDS 4
IRGFS N S
Sbjct: 84 IRGFSLNSS 92
>ref|XP_010273675.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
isoform X1 [Nelumbo nucifera]
Length = 788
Score = 91.3 bits (225), Expect = 3e-16
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
A++++Q NQ HAQ+IL+GL NDL TVTKLT KL+D AI QAH LF T PD FL+NVL
Sbjct: 24 ASTINQFNQIHAQVILNGLHNDLITVTKLTQKLADFGAIDQAHLLFSTISEPDLFLFNVL 83
Query: 30 IRGFSSNDS 4
IRGFS N S
Sbjct: 84 IRGFSLNSS 92
>ref|XP_002533229.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526949|gb|EEF29150.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 575
Score = 91.3 bits (225), Expect = 3e-16
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
+T++S L Q HA ++LHGLQND+A TKLTHKL + A A ALF T P PD FL+NVL
Sbjct: 26 STTLSHLTQLHAHLLLHGLQNDIAVATKLTHKLFNFNATSHASALFFTIPKPDLFLFNVL 85
Query: 30 IRGFSSNDSP 1
I+GFS+N+SP
Sbjct: 86 IKGFSNNNSP 95
>ref|XP_010447678.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Camelina sativa]
Length = 790
Score = 90.1 bits (222), Expect = 6e-16
Identities = 45/70 (64%), Positives = 55/70 (78%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
+TSVS L QTHAQIILHG +ND++ +TKLT +LSDL AI A LFL+ PD FL+NVL
Sbjct: 28 STSVSHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDLFLSVRRPDVFLFNVL 87
Query: 30 IRGFSSNDSP 1
+RGFS N+SP
Sbjct: 88 MRGFSVNESP 97
>ref|XP_010432951.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Camelina sativa]
Length = 790
Score = 90.1 bits (222), Expect = 6e-16
Identities = 45/70 (64%), Positives = 55/70 (78%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
+TSVS L QTHAQIILHG +ND++ +TKLT +LSDL AI A LFL+ PD FL+NVL
Sbjct: 28 STSVSHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDLFLSVRRPDVFLFNVL 87
Query: 30 IRGFSSNDSP 1
+RGFS N+SP
Sbjct: 88 MRGFSVNESP 97
>ref|XP_012442301.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Gossypium raimondii] gi|763786887|gb|KJB53883.1|
hypothetical protein B456_009G009600 [Gossypium
raimondii]
Length = 788
Score = 89.7 bits (221), Expect = 8e-16
Identities = 43/69 (62%), Positives = 55/69 (79%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
+T++S L QTHAQIIL+ QND++T+TKLTH+L DLKA A LFL+ PNPD FL+NVL
Sbjct: 27 STTLSHLTQTHAQIILNDFQNDISTITKLTHRLFDLKATSYARHLFLSIPNPDLFLFNVL 86
Query: 30 IRGFSSNDS 4
I+GFS+ S
Sbjct: 87 IKGFSNAHS 95
>ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis
thaliana] gi|7269971|emb|CAB79788.1| putative protein
[Arabidopsis thaliana] gi|332660398|gb|AEE85798.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 792
Score = 89.4 bits (220), Expect = 1e-15
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = -3
Query: 210 ATSVSQLNQTHAQIILHGLQNDLATVTKLTHKLSDLKAIRQAHALFLTTPNPDRFLYNVL 31
+TS+S L QTHAQIILHG +ND++ +TKLT +LSDL AI A +FL+ PD FL+NVL
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 30 IRGFSSNDSP 1
+RGFS N+SP
Sbjct: 90 MRGFSVNESP 99