BLASTX nr result
ID: Ziziphus21_contig00031229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00031229
(243 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 56 2e-15
gb|AFB73912.1| polyprotein [Citrus sinensis] 52 2e-13
gb|AFB73911.1| polyprotein [Citrus sinensis] 50 3e-12
gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna a... 50 5e-12
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 49 1e-11
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 47 4e-11
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 47 4e-11
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 47 4e-11
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 47 4e-11
ref|XP_006471418.1| PREDICTED: gibberellin-regulated protein 14-... 47 8e-11
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 47 2e-08
ref|XP_008778480.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 43 4e-08
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 46 5e-08
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 45 5e-08
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 44 5e-08
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 46 7e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 42 4e-07
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera] 45 4e-07
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera] 43 6e-07
emb|CAN76388.1| hypothetical protein VITISV_037906 [Vitis vinifera] 43 6e-07
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 55.8 bits (133), Expect(2) = 2e-15
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSDF 72
R+HWN VKRIL+Y+KGTS+VALCY GSDF
Sbjct: 1115 REHWNCVKRILRYIKGTSDVALCYGGSDF 1143
Score = 52.8 bits (125), Expect(2) = 2e-15
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LMF M+C +PDIAQAVG VSRY ANPGRE
Sbjct: 1088 LMFAMICTRPDIAQAVGVVSRYMANPGRE 1116
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 51.6 bits (122), Expect(2) = 2e-13
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LMF M+C +PDIAQAVGAVSRY ANPG E
Sbjct: 1099 LMFAMICTRPDIAQAVGAVSRYMANPGGE 1127
Score = 50.1 bits (118), Expect(2) = 2e-13
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = -2
Query: 155 KHWNVVKRILKYVKGTSNVALCYEGSDF 72
+HW VKRIL+Y++GTSNVALCY GS+F
Sbjct: 1127 EHWIAVKRILRYIRGTSNVALCYGGSEF 1154
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 50.1 bits (118), Expect(2) = 3e-12
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LMF M+C +PDIAQAVG VSRY ANPG E
Sbjct: 1099 LMFAMICTRPDIAQAVGVVSRYMANPGGE 1127
Score = 48.1 bits (113), Expect(2) = 3e-12
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -2
Query: 155 KHWNVVKRILKYVKGTSNVALCYEGSDF 72
+HW VKRIL+Y++GTS+VALCY GS+F
Sbjct: 1127 EHWIAVKRILRYIRGTSDVALCYGGSEF 1154
>gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
Length = 225
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -2
Query: 155 KHWNVVKRILKYVKGTSNVALCYEGSDF 72
+HWN VKR+L+Y+KGTS+VALC+ GS F
Sbjct: 43 EHWNAVKRVLRYIKGTSDVALCFGGSKF 70
Score = 47.8 bits (112), Expect(2) = 5e-12
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ M+C +PDIA AVGAVSR+ ANPG E
Sbjct: 15 LMYAMICTRPDIAHAVGAVSRFMANPGEE 43
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 48.9 bits (115), Expect(2) = 1e-11
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSDF 72
++HWN VKRIL+Y++GTS ALC+ GS+F
Sbjct: 1122 KEHWNAVKRILRYIRGTSGAALCFGGSEF 1150
Score = 47.0 bits (110), Expect(2) = 1e-11
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ M+C +PDIAQAVG VSR+ A+PG+E
Sbjct: 1095 LMYAMICTRPDIAQAVGTVSRFMADPGKE 1123
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.4 bits (111), Expect(2) = 4e-11
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSD 75
++HWN VKRI++Y+KGTS VA+C+ GS+
Sbjct: 1122 KEHWNAVKRIMRYIKGTSGVAVCFGGSE 1149
Score = 47.0 bits (110), Expect(2) = 4e-11
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ M+C +PDIAQAVG VSR+ A+PG+E
Sbjct: 1095 LMYAMICTRPDIAQAVGVVSRFMADPGKE 1123
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.4 bits (111), Expect(2) = 4e-11
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSD 75
++HWN VKRI++Y+KGTS VA+C+ GS+
Sbjct: 1122 KEHWNAVKRIMRYIKGTSGVAVCFGGSE 1149
Score = 47.0 bits (110), Expect(2) = 4e-11
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ M+C +PDIAQAVG VSR+ A+PG+E
Sbjct: 1095 LMYAMICTRPDIAQAVGVVSRFMADPGKE 1123
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.4 bits (111), Expect(2) = 4e-11
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSD 75
++HWN VKRI++Y+KGTS VA+C+ GS+
Sbjct: 1122 KEHWNAVKRIMRYIKGTSGVAVCFGGSE 1149
Score = 47.0 bits (110), Expect(2) = 4e-11
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ M+C +PDIAQAVG VSR+ A+PG+E
Sbjct: 1095 LMYAMICTRPDIAQAVGVVSRFMADPGKE 1123
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.4 bits (111), Expect(2) = 4e-11
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSD 75
++HWN VKRI++Y+KGTS VA+C+ GS+
Sbjct: 1122 KEHWNAVKRIMRYIKGTSGVAVCFGGSE 1149
Score = 47.0 bits (110), Expect(2) = 4e-11
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ M+C +PDIAQAVG VSR+ A+PG+E
Sbjct: 1095 LMYAMICTRPDIAQAVGVVSRFMADPGKE 1123
>ref|XP_006471418.1| PREDICTED: gibberellin-regulated protein 14-like [Citrus sinensis]
Length = 290
Score = 47.4 bits (111), Expect(2) = 8e-11
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = -2
Query: 155 KHWNVVKRILKYVKGTSNVALCYEGSDF 72
++W VVKRIL+Y++GTS+VALCY GS+F
Sbjct: 52 EYWIVVKRILRYIRGTSDVALCYGGSEF 79
Score = 45.8 bits (107), Expect(2) = 8e-11
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LMF M+C +PDIAQ VGA+SRY NP E
Sbjct: 24 LMFAMICTRPDIAQVVGAISRYMTNPNGE 52
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PDIA AVG VSR+ +NPGRE
Sbjct: 1116 LMYAMVCTRPDIAHAVGVVSRFLSNPGRE 1144
Score = 37.7 bits (86), Expect(2) = 2e-08
Identities = 13/24 (54%), Positives = 22/24 (91%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCY 87
R+HW+ VK IL+Y++GTS+++LC+
Sbjct: 1143 REHWDAVKWILRYLRGTSSLSLCF 1166
>ref|XP_008778480.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103698265
[Phoenix dactylifera]
Length = 1581
Score = 43.1 bits (100), Expect(2) = 4e-08
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PDIAQAVG VSR+ + PG E
Sbjct: 1452 LMYAMVCTRPDIAQAVGVVSRFMSCPGLE 1480
Score = 40.8 bits (94), Expect(2) = 4e-08
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2
Query: 155 KHWNVVKRILKYVKGTSNVALCYEGSDFR 69
+HW VK IL+Y++GT ++LCY GS+ R
Sbjct: 1480 EHWRAVKWILRYLRGTEQMSLCYGGSEIR 1508
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 45.8 bits (107), Expect(2) = 5e-08
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PDIA VG VSR+ +NPGRE
Sbjct: 1062 LMYAMVCTRPDIAHVVGTVSRFMSNPGRE 1090
Score = 37.7 bits (86), Expect(2) = 5e-08
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEG 81
R+HWN VK IL+Y++GT+ + LC+ G
Sbjct: 1089 REHWNAVKWILRYLRGTTCLRLCFGG 1114
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 45.4 bits (106), Expect(2) = 5e-08
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PDIA AVG VSR+ NPG+E
Sbjct: 1118 LMYAMVCTRPDIAHAVGVVSRFLENPGKE 1146
Score = 38.1 bits (87), Expect(2) = 5e-08
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSD 75
++HW VK IL+Y++GT+ LC+ GSD
Sbjct: 1145 KEHWEAVKWILRYLRGTTGDCLCFGGSD 1172
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 44.3 bits (103), Expect(2) = 5e-08
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGR 158
LM+ MVC +PDIA AVG VSRY ANP +
Sbjct: 478 LMYAMVCTRPDIAHAVGLVSRYLANPSK 505
Score = 39.3 bits (90), Expect(2) = 5e-08
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = -2
Query: 152 HWNVVKRILKYVKGTSNVALCYEGSD 75
HW VK IL+Y++GTSN++LC+ G +
Sbjct: 507 HWEAVKWILRYLRGTSNLSLCFGGGE 532
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 46.2 bits (108), Expect(2) = 7e-08
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PDIA AVG VSR+ +NPG+E
Sbjct: 1119 LMYAMVCTRPDIAHAVGVVSRFLSNPGKE 1147
Score = 37.0 bits (84), Expect(2) = 7e-08
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSDFRFSIGLAET*VA 36
++HW+ VK IL+Y++GTS + LC+ G D +G + +A
Sbjct: 1146 KEHWDAVKWILRYLRGTSKLCLCF-GEDNPVLVGYTDADMA 1185
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 41.6 bits (96), Expect(2) = 4e-07
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PD+A AV VSR+ PGRE
Sbjct: 1099 LMYAMVCTRPDLAHAVSVVSRFMGQPGRE 1127
Score = 38.9 bits (89), Expect(2) = 4e-07
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEG 81
R+HW VKRI +Y++GTS+V L Y G
Sbjct: 1126 REHWQAVKRIFRYLRGTSDVGLIYGG 1151
>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
Length = 1236
Score = 44.7 bits (104), Expect(2) = 4e-07
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+TMVC +PDIA AVG VSR+ + PG++
Sbjct: 1027 LMYTMVCTRPDIAHAVGVVSRFMSRPGKQ 1055
Score = 35.8 bits (81), Expect(2) = 4e-07
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSDFR 69
++HW VK IL+Y+KG+ + LC+ G+ +
Sbjct: 1054 KQHWEAVKWILRYLKGSLDTCLCFTGASLK 1083
>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
Length = 1286
Score = 42.7 bits (99), Expect(2) = 6e-07
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PDIA AVG VSR+ + PG++
Sbjct: 1077 LMYAMVCTRPDIAHAVGVVSRFMSRPGKQ 1105
Score = 37.4 bits (85), Expect(2) = 6e-07
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSDFR 69
++HW VVK IL+Y+KG+ + LC+ G+ +
Sbjct: 1104 KQHWEVVKWILRYLKGSLDTCLCFTGASLK 1133
>emb|CAN76388.1| hypothetical protein VITISV_037906 [Vitis vinifera]
Length = 1148
Score = 42.7 bits (99), Expect(2) = 6e-07
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = -3
Query: 241 LMFTMVCKKPDIAQAVGAVSRYTANPGRE 155
LM+ MVC +PDIA AVG VSR+ + PG++
Sbjct: 1019 LMYVMVCTRPDIAHAVGVVSRFMSRPGKQ 1047
Score = 37.4 bits (85), Expect(2) = 6e-07
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -2
Query: 158 RKHWNVVKRILKYVKGTSNVALCYEGSDFRFSI 60
++HW VK IL+Y+KG+ + LC+ +DF I
Sbjct: 1046 KQHWEAVKWILRYLKGSLDTCLCFTDADFASDI 1078