BLASTX nr result

ID: Ziziphus21_contig00030419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00030419
         (257 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...    63   7e-08
ref|XP_004289517.1| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...    59   1e-06
gb|ALL29183.1| 1-deoxy-D-xylulose-5-phosphatesynthase [Crataegus...    58   2e-06

>ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic [Vitis vinifera]
           gi|296090521|emb|CBI40852.3| unnamed protein product
           [Vitis vinifera]
          Length = 718

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = -3

Query: 192 MAVSGCLMRLNPQSISPCLNYPKPNGNCRKQFSLRACIGTSEDGE--GTVTSRE-NNGWK 22
           MAVS C++R NP SISPCL  P+P+ + RKQ  LRAC   + DGE    +T +E + GWK
Sbjct: 1   MAVSACVVRTNP-SISPCLKAPRPSLSGRKQSCLRACAANTSDGEEGNKMTRKEKDGGWK 59

Query: 21  IDYSTEK 1
           I+++ EK
Sbjct: 60  IEFTGEK 66


>ref|XP_004289517.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 714

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -3

Query: 192 MAVSGCLMRLNPQSISPCLNYPKP--NGNCRKQFSLRACIGTSEDGEGTVTSRE-NNGWK 22
           MAVSG L+R N Q  S C+N P P  N +CRKQF L+A  G ++  E  +T +E + GWK
Sbjct: 1   MAVSGTLIRPN-QYFSSCVNTPSPRFNPSCRKQFCLKASAGNTDGEERKLTRKEKDGGWK 59

Query: 21  IDYSTEK 1
           I+Y+ EK
Sbjct: 60  IEYTAEK 66


>gb|ALL29183.1| 1-deoxy-D-xylulose-5-phosphatesynthase [Crataegus pinnatifida var.
           major]
          Length = 713

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -3

Query: 192 MAVSGCLMRLNPQSISPCLNYPKP--NGNCRKQFSLRACIGTSEDGEGTVTSRENNGWKI 19
           MAVSG L+R N Q +  CLN P P  N +CR+Q  ++A  G S+ G+  +  +E +GWKI
Sbjct: 1   MAVSGVLVRPN-QYLFSCLNPPAPKLNHSCRQQLCVKASAGNSDGGDCRLIRKEKDGWKI 59

Query: 18  DYSTEK 1
           D+S EK
Sbjct: 60  DFSGEK 65


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