BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00026649
         (578 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   314   2e-83
ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chl...   313   4e-83
ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chl...   308   1e-81
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   308   2e-81
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   305   8e-81
ref|XP_012568926.1| PREDICTED: RNA pseudouridine synthase 6, chl...   305   1e-80
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...   304   2e-80
gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum]   303   3e-80
gb|KHG01919.1| hypothetical protein F383_22898 [Gossypium arboreum]   303   3e-80
ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chl...   303   4e-80
ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chl...   303   4e-80
ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chl...   303   5e-80
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   303   5e-80
ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chl...   301   2e-79
ref|XP_012444881.1| PREDICTED: RNA pseudouridine synthase 6, chl...   301   2e-79
gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium r...   301   2e-79
ref|XP_009357423.1| PREDICTED: RNA pseudouridine synthase 6, chl...   300   3e-79
ref|XP_009357422.1| PREDICTED: RNA pseudouridine synthase 6, chl...   300   3e-79
gb|KHN37589.1| RNA pseudourine synthase 6, chloroplastic [Glycin...   300   4e-79
ref|XP_004293270.1| PREDICTED: RNA pseudouridine synthase 6, chl...   300   4e-79

>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
           gi|462409392|gb|EMJ14726.1| hypothetical protein
           PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  314 bits (805), Expect = 2e-83
 Identities = 140/188 (74%), Positives = 160/188 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            AP+P G ITHYMRPIN+APRLISEDFIE W LC+LE
Sbjct: 281 EYCSVFHGKIREKKVKKLYLALAAAPVPTGIITHYMRPINVAPRLISEDFIERWSLCQLE 340

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC+++PWPN V EEKYC+EDC WPSKDYAYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 341 VMECKEIPWPNAVVEEKYCVEDCGWPSKDYAYECKINLLTGRTHQVRAQLAACGAPIVGD 400

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+ + G+NPFG+ +K YT+ENDK  A+ EWIA HGKEP+VAIGLQACQISW
Sbjct: 401 SMYMPAAVAEMESPGLNPFGQYKKHYTTENDKETAVAEWIARHGKEPNVAIGLQACQISW 460

Query: 37  DDGKHIYE 14
           DDGKH +E
Sbjct: 461 DDGKHTFE 468


>ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Prunus
           mume]
          Length = 469

 Score =  313 bits (802), Expect = 4e-83
 Identities = 140/188 (74%), Positives = 160/188 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            AP+P G ITHYMRPIN+APRLISEDFIE W LC+LE
Sbjct: 273 EYCSVFHGKIREKKVKKLYLALAAAPVPTGIITHYMRPINVAPRLISEDFIERWSLCQLE 332

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWPN V EEKYC+EDC WPSKDYAYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 333 VMECKEVPWPNAVVEEKYCVEDCGWPSKDYAYECKINLLTGRTHQVRAQLAACGAPIVGD 392

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+ + G+NPFG+ +K YT+ENDK  A+ +WIA HGKEP+VAIGLQACQISW
Sbjct: 393 SMYMPAAVAEMESPGLNPFGQYKKHYTTENDKETAVAKWIARHGKEPNVAIGLQACQISW 452

Query: 37  DDGKHIYE 14
           DDGKH +E
Sbjct: 453 DDGKHTFE 460


>ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Populus
           euphratica]
          Length = 467

 Score =  308 bits (789), Expect = 1e-81
 Identities = 135/187 (72%), Positives = 160/187 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           E CS+FHGKIRE            +P+P+G + HYMRPINMAPRL+SE+FI+GWHLC+LE
Sbjct: 272 EDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLE 331

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V EEKYC++DC WPSKD+AYECKINLLTGRTHQIRAQLAA GAP+VGD
Sbjct: 332 VMECKRVPWPDAVVEEKYCVQDCGWPSKDHAYECKINLLTGRTHQIRAQLAAVGAPLVGD 391

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+ + G NPFGK +K YTSE+DKAIA+ EW+  HGKEP+VAIGLQACQISW
Sbjct: 392 SMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISW 451

Query: 37  DDGKHIY 17
           DDGKHIY
Sbjct: 452 DDGKHIY 458


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
           gi|550340110|gb|EEE85437.2| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 470

 Score =  308 bits (788), Expect = 2e-81
 Identities = 135/187 (72%), Positives = 160/187 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           E CS+FHGKIRE            +P+P+G + HYMRPINMAPRL+SE+FI+GWHLC+LE
Sbjct: 272 EDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLE 331

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V EEKYC++DC WPSKD+AYECKINLLTGRTHQIRAQLAA GAP+VGD
Sbjct: 332 VMECKRVPWPDAVMEEKYCVQDCGWPSKDHAYECKINLLTGRTHQIRAQLAALGAPLVGD 391

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+ + G NPFGK +K YTSE+DKAIA+ EW+  HGKEP+VAIGLQACQISW
Sbjct: 392 SMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISW 451

Query: 37  DDGKHIY 17
           DDGKHIY
Sbjct: 452 DDGKHIY 458


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 395

 Score =  305 bits (782), Expect = 8e-81
 Identities = 134/188 (71%), Positives = 157/188 (83%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYC +FHGKIRE             P+PVG ITHYMRP N+ PRL+SE+FIEGW+LC+LE
Sbjct: 201 EYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIPPRLVSEEFIEGWYLCQLE 260

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           ++ECRKVPWP+ VTEEKY +EDC WPSKD+AYECKINLLTGRTHQIRAQLAACGAP+VGD
Sbjct: 261 VLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGRTHQIRAQLAACGAPLVGD 320

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N GVNPFGK +K YT END+++ + EW+  HGKEPS+AIGLQAC+ISW
Sbjct: 321 SMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWVERHGKEPSIAIGLQACEISW 380

Query: 37  DDGKHIYE 14
            D KHIY+
Sbjct: 381 GDSKHIYK 388


>ref|XP_012568926.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Cicer
           arietinum]
          Length = 473

 Score =  305 bits (780), Expect = 1e-80
 Identities = 134/188 (71%), Positives = 156/188 (82%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            +P+P G I HYMRPINMAPRLISEDF +GWH+C+LE
Sbjct: 278 EYCSVFHGKIREKKVKKIYLALAASPLPTGIIKHYMRPINMAPRLISEDFNKGWHICQLE 337

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           ++EC K+PWP  V +EKYC+EDC WPS+DYAYECKINLLTGRTHQIRAQ AAC AP++GD
Sbjct: 338 VLECIKIPWPTTVVQEKYCVEDCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPLIGD 397

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N G+NPFGK +K +TSE++K  A+  WIA HGKEPSVAIGLQACQISW
Sbjct: 398 SMYMPAAIAEMMNPGLNPFGKYKKDFTSESEKETAVINWIAQHGKEPSVAIGLQACQISW 457

Query: 37  DDGKHIYE 14
           DDG+HIYE
Sbjct: 458 DDGEHIYE 465


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508781387|gb|EOY28643.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 491

 Score =  304 bits (779), Expect = 2e-80
 Identities = 139/188 (73%), Positives = 159/188 (84%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            AP+P+G ITHYMRPINMAPRL+SEDFI+GW+LC+LE
Sbjct: 294 EYCSVFHGKIREKKVKKLYLALTAAPLPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLE 353

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC+KVPWP+ V +E YCIED  WP KD+AYECKINLLTGRTHQ+RAQLAACGAPI+GD
Sbjct: 354 VMECKKVPWPDYVIQENYCIEDSGWPLKDHAYECKINLLTGRTHQVRAQLAACGAPILGD 413

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMP  IAEI N G+NPFGK +K +TSENDK IAITEWI+  GKEPSVAIGLQACQISW
Sbjct: 414 SMYMPPTIAEIANPGLNPFGKYKK-HTSENDKEIAITEWISQFGKEPSVAIGLQACQISW 472

Query: 37  DDGKHIYE 14
           DDG+H Y+
Sbjct: 473 DDGEHFYK 480


>gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum]
          Length = 475

 Score =  303 bits (777), Expect = 3e-80
 Identities = 139/188 (73%), Positives = 160/188 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCSIFHGKIRE            AP+P+G ITHYMRPIN+APRLISEDFI+GW+LCKLE
Sbjct: 278 EYCSIFHGKIREKKVKKLYLALTAAPVPIGIITHYMRPINVAPRLISEDFIKGWYLCKLE 337

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V ++KYCIED  WPSKD AYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 338 VMECKEVPWPDPVIQQKYCIEDFEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGD 397

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N G+NPFGK +K YT+E+DK +A+T+W A  GKEP VAIGLQACQISW
Sbjct: 398 SMYMPAAIAEMANPGLNPFGKYKK-YTTESDKEMAVTKWFARFGKEPKVAIGLQACQISW 456

Query: 37  DDGKHIYE 14
           DDG+H YE
Sbjct: 457 DDGEHFYE 464


>gb|KHG01919.1| hypothetical protein F383_22898 [Gossypium arboreum]
          Length = 520

 Score =  303 bits (777), Expect = 3e-80
 Identities = 139/188 (73%), Positives = 160/188 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCSIFHGKIRE            AP+P+G ITHYMRPIN+APRLISEDFI+GW+LCKLE
Sbjct: 278 EYCSIFHGKIREKKVKKLYLALTAAPVPIGIITHYMRPINVAPRLISEDFIKGWYLCKLE 337

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V ++KYCIED  WPSKD AYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 338 VMECKEVPWPDPVIQQKYCIEDFEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGD 397

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N G+NPFGK +K YT+E+DK +A+T+W A  GKEP VAIGLQACQISW
Sbjct: 398 SMYMPAAIAEMANPGLNPFGKYKK-YTTESDKEMAVTKWFARFGKEPKVAIGLQACQISW 456

Query: 37  DDGKHIYE 14
           DDG+H YE
Sbjct: 457 DDGEHFYE 464


>ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Sesamum
           indicum]
          Length = 484

 Score =  303 bits (776), Expect = 4e-80
 Identities = 135/188 (71%), Positives = 159/188 (84%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            AP+ +G ITHYMRP+N+APRLIS +FI GWHLC+LE
Sbjct: 290 EYCSVFHGKIREKKVKKLYLALAAAPVSLGVITHYMRPVNIAPRLISGEFINGWHLCQLE 349

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           ++ECRKVPWPN++ EEK  IEDC WPSKD+AYEC+INLLTGRTHQIRAQLAACGAP+VGD
Sbjct: 350 VLECRKVPWPNRIIEEKNSIEDCGWPSKDFAYECEINLLTGRTHQIRAQLAACGAPLVGD 409

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE  + G+NPFGK +K Y+S++ K +A+ EWIAHHGKEPSVAIGLQACQISW
Sbjct: 410 SMYMPAAVAEANSPGLNPFGKNKKEYSSDDVKVLAVEEWIAHHGKEPSVAIGLQACQISW 469

Query: 37  DDGKHIYE 14
           DDG+H YE
Sbjct: 470 DDGEHTYE 477


>ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  303 bits (776), Expect = 4e-80
 Identities = 135/188 (71%), Positives = 160/188 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            APMP+G +THYMRP+N+APRLISEDFI+GW+LC+LE
Sbjct: 278 EYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLE 337

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           ++EC++VPWP+ + EEKYCIED  WP K+ A++CKINLLTGRTHQIRAQLAACGAPIVGD
Sbjct: 338 VLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGD 397

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAEIT+ G+NPFGK +K YT+END+  A+ EWIA HGKEP VAIGLQACQISW
Sbjct: 398 SMYMPAAIAEITSPGLNPFGKYKKKYTTENDRETAVAEWIAQHGKEPGVAIGLQACQISW 457

Query: 37  DDGKHIYE 14
           DDG+H Y+
Sbjct: 458 DDGEHFYK 465


>ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nelumbo
           nucifera]
          Length = 484

 Score =  303 bits (775), Expect = 5e-80
 Identities = 134/188 (71%), Positives = 159/188 (84%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCSIFHGKIRE            AP+PVGTITH+MRPIN+APRLIS+DFI+GWHLCKLE
Sbjct: 290 EYCSIFHGKIREKKVKKLYLALAAAPVPVGTITHHMRPINIAPRLISKDFIKGWHLCKLE 349

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           ++EC++VPWPN   E++YCI+DC WP KD AYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 350 VLECKEVPWPNSNIEKEYCIDDCGWPQKDVAYECKINLLTGRTHQVRAQLAACGAPIVGD 409

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+TN G+NPFG+    YT+++++  AI EWI HHGKEP +AIGLQACQISW
Sbjct: 410 SMYMPAALAEMTNPGLNPFGEYGMKYTNDDNRTKAIEEWIVHHGKEPRIAIGLQACQISW 469

Query: 37  DDGKHIYE 14
           D+G+H YE
Sbjct: 470 DEGEHFYE 477


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score =  303 bits (775), Expect = 5e-80
 Identities = 131/188 (69%), Positives = 160/188 (85%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            +P+PVG I +YMRP+N+APRL+SE+F+ GWHLC+LE
Sbjct: 278 EYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLE 337

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           ++ECRKVPWP+   EEKY +EDC WPSKD+AYECKINLLTGRTHQIRAQLAA GAP+VGD
Sbjct: 338 VLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYECKINLLTGRTHQIRAQLAASGAPLVGD 397

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+ N G+NPFGK RK YT+E+D+++A+ EW+A HGKEP VAIGLQAC+ISW
Sbjct: 398 SMYMPAAVAEMANPGLNPFGKHRKQYTNESDESMAVAEWVAQHGKEPKVAIGLQACEISW 457

Query: 37  DDGKHIYE 14
           D+GKHIY+
Sbjct: 458 DEGKHIYK 465


>ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2
           [Gossypium raimondii]
          Length = 477

 Score =  301 bits (770), Expect = 2e-79
 Identities = 136/188 (72%), Positives = 159/188 (84%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCSIFHGKIRE            AP+P+G ITHYMRPIN+APRL+SEDFI+GW+LCKLE
Sbjct: 280 EYCSIFHGKIREKKVKKLYLALTAAPVPIGIITHYMRPINVAPRLVSEDFIKGWYLCKLE 339

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V ++KYCIED  WPSKD AYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 340 VMECKEVPWPDPVIQQKYCIEDSEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGD 399

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N G+NPFGK +K YT+E+DK + +T+W A  GKEP VAIGLQAC+ISW
Sbjct: 400 SMYMPAAIAEMANPGLNPFGKYKK-YTTESDKEMTVTKWFARFGKEPKVAIGLQACEISW 458

Query: 37  DDGKHIYE 14
           DDG+H YE
Sbjct: 459 DDGEHFYE 466


>ref|XP_012444881.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
           [Gossypium raimondii] gi|823224229|ref|XP_012444882.1|
           PREDICTED: RNA pseudouridine synthase 6, chloroplastic
           isoform X1 [Gossypium raimondii]
           gi|823224231|ref|XP_012444883.1| PREDICTED: RNA
           pseudouridine synthase 6, chloroplastic isoform X1
           [Gossypium raimondii]
          Length = 488

 Score =  301 bits (770), Expect = 2e-79
 Identities = 136/188 (72%), Positives = 159/188 (84%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCSIFHGKIRE            AP+P+G ITHYMRPIN+APRL+SEDFI+GW+LCKLE
Sbjct: 291 EYCSIFHGKIREKKVKKLYLALTAAPVPIGIITHYMRPINVAPRLVSEDFIKGWYLCKLE 350

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V ++KYCIED  WPSKD AYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 351 VMECKEVPWPDPVIQQKYCIEDSEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGD 410

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N G+NPFGK +K YT+E+DK + +T+W A  GKEP VAIGLQAC+ISW
Sbjct: 411 SMYMPAAIAEMANPGLNPFGKYKK-YTTESDKEMTVTKWFARFGKEPKVAIGLQACEISW 469

Query: 37  DDGKHIYE 14
           DDG+H YE
Sbjct: 470 DDGEHFYE 477


>gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium raimondii]
           gi|763790717|gb|KJB57713.1| hypothetical protein
           B456_009G176900 [Gossypium raimondii]
          Length = 475

 Score =  301 bits (770), Expect = 2e-79
 Identities = 136/188 (72%), Positives = 159/188 (84%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCSIFHGKIRE            AP+P+G ITHYMRPIN+APRL+SEDFI+GW+LCKLE
Sbjct: 278 EYCSIFHGKIREKKVKKLYLALTAAPVPIGIITHYMRPINVAPRLVSEDFIKGWYLCKLE 337

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V ++KYCIED  WPSKD AYECKINLLTGRTHQ+RAQLAACGAPIVGD
Sbjct: 338 VMECKEVPWPDPVIQQKYCIEDSEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGD 397

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N G+NPFGK +K YT+E+DK + +T+W A  GKEP VAIGLQAC+ISW
Sbjct: 398 SMYMPAAIAEMANPGLNPFGKYKK-YTTESDKEMTVTKWFARFGKEPKVAIGLQACEISW 456

Query: 37  DDGKHIYE 14
           DDG+H YE
Sbjct: 457 DDGEHFYE 464


>ref|XP_009357423.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X2 [Pyrus x bretschneideri]
          Length = 398

 Score =  300 bits (768), Expect = 3e-79
 Identities = 136/188 (72%), Positives = 155/188 (82%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            AP+P+GTITHYMRPINMAPRL SEDF+E W LC+LE
Sbjct: 202 EYCSVFHGKIREKKVKKHYLALAAAPVPIGTITHYMRPINMAPRLTSEDFMERWSLCQLE 261

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V E+KYCIEDC WPSK+YAYECKINLLTGRTHQ+RAQLAA GAPIVGD
Sbjct: 262 VMECKEVPWPSSVVEQKYCIEDCGWPSKEYAYECKINLLTGRTHQVRAQLAALGAPIVGD 321

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+ + G NPFGK +K YT   DK +AI EW A HGKEP VAIGLQACQISW
Sbjct: 322 SMYMPAAVAEMASPGRNPFGKYKKHYTHVTDKEVAIEEWSAQHGKEPGVAIGLQACQISW 381

Query: 37  DDGKHIYE 14
           DDGK+ +E
Sbjct: 382 DDGKYTFE 389


>ref|XP_009357422.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Pyrus x bretschneideri]
          Length = 476

 Score =  300 bits (768), Expect = 3e-79
 Identities = 136/188 (72%), Positives = 155/188 (82%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           EYCS+FHGKIRE            AP+P+GTITHYMRPINMAPRL SEDF+E W LC+LE
Sbjct: 280 EYCSVFHGKIREKKVKKHYLALAAAPVPIGTITHYMRPINMAPRLTSEDFMERWSLCQLE 339

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC++VPWP+ V E+KYCIEDC WPSK+YAYECKINLLTGRTHQ+RAQLAA GAPIVGD
Sbjct: 340 VMECKEVPWPSSVVEQKYCIEDCGWPSKEYAYECKINLLTGRTHQVRAQLAALGAPIVGD 399

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAA+AE+ + G NPFGK +K YT   DK +AI EW A HGKEP VAIGLQACQISW
Sbjct: 400 SMYMPAAVAEMASPGRNPFGKYKKHYTHVTDKEVAIEEWSAQHGKEPGVAIGLQACQISW 459

Query: 37  DDGKHIYE 14
           DDGK+ +E
Sbjct: 460 DDGKYTFE 467


>gb|KHN37589.1| RNA pseudourine synthase 6, chloroplastic [Glycine soja]
          Length = 478

 Score =  300 bits (767), Expect = 4e-79
 Identities = 130/188 (69%), Positives = 157/188 (83%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           +YCSIFHGKIRE            +P+P G ITHYMRPINMAPRLISEDFI+GWHLC+LE
Sbjct: 283 DYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLE 342

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           ++ECRK+PWP    ++KYC+EDC WPS+DYAYECKINLLTG+THQIRAQLAA  AP++GD
Sbjct: 343 VLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECKINLLTGKTHQIRAQLAAYKAPLIGD 402

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIA+++N G+NPFGK +K ++SE++K  A+  W+A HGKEPSVAIGLQACQISW
Sbjct: 403 SMYMPAAIADVSNPGLNPFGKYKKDFSSESEKETAVVNWMAQHGKEPSVAIGLQACQISW 462

Query: 37  DDGKHIYE 14
           DD +H YE
Sbjct: 463 DDDEHFYE 470


>ref|XP_004293270.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Fragaria
           vesca subsp. vesca] gi|764549508|ref|XP_011459966.1|
           PREDICTED: RNA pseudouridine synthase 6, chloroplastic
           [Fragaria vesca subsp. vesca]
           gi|764549517|ref|XP_011459967.1| PREDICTED: RNA
           pseudouridine synthase 6, chloroplastic [Fragaria vesca
           subsp. vesca]
          Length = 477

 Score =  300 bits (767), Expect = 4e-79
 Identities = 136/188 (72%), Positives = 157/188 (83%)
 Frame = -2

Query: 577 EYCSIFHGKIREXXXXXXXXXXXXAPMPVGTITHYMRPINMAPRLISEDFIEGWHLCKLE 398
           +YCS+FHGKIRE            AP+P+GTITHYMRPIN+APRLISED IE W LC+LE
Sbjct: 281 DYCSVFHGKIREKKVKKLYLALAAAPVPLGTITHYMRPINVAPRLISEDSIERWSLCQLE 340

Query: 397 IMECRKVPWPNQVTEEKYCIEDCHWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGD 218
           +MEC+KVPWP+ V EE+Y +EDC WPSKDYAYECKINLLTG+THQIRAQLAACG P+VGD
Sbjct: 341 VMECKKVPWPSSVIEEEYGVEDCGWPSKDYAYECKINLLTGKTHQIRAQLAACGTPLVGD 400

Query: 217 SMYMPAAIAEITNTGVNPFGKCRKSYTSENDKAIAITEWIAHHGKEPSVAIGLQACQISW 38
           SMYMPAAIAE+ N  +NPFGK +K Y  END+ IA+TEW+A HGKEP VAIGLQACQISW
Sbjct: 401 SMYMPAAIAEMENPELNPFGKHKKHYAGENDEEIAVTEWMARHGKEPIVAIGLQACQISW 460

Query: 37  DDGKHIYE 14
           DDG+H +E
Sbjct: 461 DDGEHSFE 468