BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00026407
         (546 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein...   221   2e-55
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein...   214   2e-53
ref|XP_009337632.1| PREDICTED: RNA polymerase-associated protein...   212   8e-53
ref|XP_008370365.1| PREDICTED: RNA polymerase-associated protein...   210   3e-52
ref|XP_008388458.1| PREDICTED: RNA polymerase-associated protein...   209   7e-52
ref|XP_004302289.2| PREDICTED: RNA polymerase-associated protein...   209   9e-52
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein...   208   1e-51
ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein...   208   1e-51
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein...   207   2e-51
ref|XP_014509564.1| PREDICTED: protein RTF1 homolog [Vigna radia...   207   3e-51
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein...   207   3e-51
ref|XP_010100559.1| RNA polymerase-associated protein RTF1-like ...   206   6e-51
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe...   206   6e-51
ref|XP_011047833.1| PREDICTED: RNA polymerase-associated protein...   206   6e-51
ref|XP_011047832.1| PREDICTED: RNA polymerase-associated protein...   206   6e-51
ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein...   206   6e-51
ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein...   206   6e-51
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra...   206   6e-51
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein...   206   7e-51
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   206   7e-51

>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
           indicum]
          Length = 627

 Score =  221 bits (562), Expect = 2e-55
 Identities = 111/181 (61%), Positives = 137/181 (75%)
 Frame = -1

Query: 546 QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
           QELEASR   +KD+KA +LAEMNR+N+VEN ++ASELKPVN SLKAG+AGYDPFSRRWTR
Sbjct: 431 QELEASRQPQEKDSKAVKLAEMNRRNRVENFRNASELKPVNTSLKAGEAGYDPFSRRWTR 490

Query: 366 SRNYYASSKAGGEDEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGKLVDT 187
           SRNYY ++  GGE         ++ +  + GG +++ +A V  T         AGKLVDT
Sbjct: 491 SRNYYVANSNGGEAAGETNGDASAALPGSNGGGRVSAEAGVAATAAALEAAAGAGKLVDT 550

Query: 186 GAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHGRK 7
            APVD+ TE N+LHNFELPISLA L+KFGGPQGA  G+MARKQRIEAT+G +VPE+ GR+
Sbjct: 551 SAPVDQGTESNMLHNFELPISLAALQKFGGPQGAQAGFMARKQRIEATLGVKVPENDGRR 610

Query: 6   H 4
           H
Sbjct: 611 H 611


>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
            nucifera]
          Length = 666

 Score =  214 bits (546), Expect = 2e-53
 Identities = 114/184 (61%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
 Frame = -1

Query: 546  QELEA-SRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWT 370
            QELEA SR A +KD+KA RLAEMN++N+ EN K+ASELKPVN SLKAG+AGYDPFSRRWT
Sbjct: 467  QELEAMSRQAKEKDSKAVRLAEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWT 526

Query: 369  RSRNYYASSKAGGEDEAPEEKVGTSEVDINLGGV--KLAGDASVEVTKXXXXXXXXAGKL 196
            RSRNYY S    G   A  E    S V +   G   + A +A +  T         AGKL
Sbjct: 527  RSRNYYVSKPGEGAPTANGEAAVASAVSVASSGTGARAAAEAGIAATAAALEAAAGAGKL 586

Query: 195  VDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDH 16
            VDT APVD+ TE N LH+FELPISLA L+KFGGPQGAHLG++ RKQRIEATVG +VPE+ 
Sbjct: 587  VDTSAPVDQGTESNSLHDFELPISLAGLQKFGGPQGAHLGFLGRKQRIEATVGCRVPEND 646

Query: 15   GRKH 4
            GR+H
Sbjct: 647  GRRH 650


>ref|XP_009337632.1| PREDICTED: RNA polymerase-associated protein C651.09c-like [Pyrus x
            bretschneideri]
          Length = 651

 Score =  212 bits (540), Expect = 8e-53
 Identities = 113/188 (60%), Positives = 131/188 (69%), Gaps = 7/188 (3%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            QELEASR    KD+KA RLAEMNRKN+ EN K+AS LKPVNM LKAG+AGYDPFSRRWT 
Sbjct: 443  QELEASRQTQGKDSKAIRLAEMNRKNRFENFKNASGLKPVNMKLKAGEAGYDPFSRRWTH 502

Query: 366  SRNYYASSKAGGE-------DEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXX 208
            SRNYY +   GG+       DEA E   GT+ +  N     +AG   ++ T+        
Sbjct: 503  SRNYYVARPGGGDGAAAERGDEAAEATDGTTGMGSNREKANVAGQLGMQATEAALEAAAG 562

Query: 207  AGKLVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQV 28
            AGKLVDT APVDK TE N+LHNFELP SLA L+K+GGPQGA + YM RKQRIEATVGR+ 
Sbjct: 563  AGKLVDTSAPVDKGTETNMLHNFELPFSLAPLQKYGGPQGAGIAYMERKQRIEATVGRRA 622

Query: 27   PEDHGRKH 4
              D GR+H
Sbjct: 623  -LDEGRRH 629


>ref|XP_008370365.1| PREDICTED: RNA polymerase-associated protein C651.09c-like [Malus
            domestica]
          Length = 648

 Score =  210 bits (535), Expect = 3e-52
 Identities = 113/188 (60%), Positives = 133/188 (70%), Gaps = 7/188 (3%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            QELEASR    KD+KA RLAEMNRKN+VEN K+AS LKPVNM+LK+G+AGYDPFSRRWT+
Sbjct: 440  QELEASRQTQGKDSKAIRLAEMNRKNRVENFKNASGLKPVNMNLKSGEAGYDPFSRRWTQ 499

Query: 366  SRNYYASSKAGGE-------DEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXX 208
            SRNYY +   GG+       DEA E   GT+    N     +AG   ++ T+        
Sbjct: 500  SRNYYVARPGGGDGAAAERGDEAAEATDGTTGKGSNKEKANVAGQLGMQATEAALEAAAG 559

Query: 207  AGKLVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQV 28
            AGKLVDT APVDK TE N+LHNFELP SLA L+K+GG QGA + YM RKQRIEATVGR+V
Sbjct: 560  AGKLVDTSAPVDKGTETNMLHNFELPFSLAPLQKYGGXQGAGIAYMERKQRIEATVGRRV 619

Query: 27   PEDHGRKH 4
             +D GR H
Sbjct: 620  LDD-GRGH 626


>ref|XP_008388458.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Malus
           domestica]
          Length = 644

 Score =  209 bits (532), Expect = 7e-52
 Identities = 111/181 (61%), Positives = 132/181 (72%)
 Frame = -1

Query: 546 QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
           QELEASR    KD+KA RLAEMNRKN+ EN  +AS LKP NM+LKAG+AGYDPFSRRWTR
Sbjct: 442 QELEASRQTQGKDSKAIRLAEMNRKNRFENFINASGLKPRNMNLKAGEAGYDPFSRRWTR 501

Query: 366 SRNYYASSKAGGEDEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGKLVDT 187
           SRNYY  ++ GG DEA E   GT+    N     + G+  ++ T+        AGKLVDT
Sbjct: 502 SRNYY-DARPGGGDEAAEATDGTTGTGSNGEKANVTGELGMQATEAALEAAAGAGKLVDT 560

Query: 186 GAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHGRK 7
            APVDK TE  +LHNFELPISLA L+K+GGPQGA + YM R+QRIEATVGR+V +D GR+
Sbjct: 561 SAPVDKGTESYVLHNFELPISLAPLQKYGGPQGAAIAYMERRQRIEATVGRRVLDD-GRR 619

Query: 6   H 4
           H
Sbjct: 620 H 620


>ref|XP_004302289.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 649

 Score =  209 bits (531), Expect = 9e-52
 Identities = 110/185 (59%), Positives = 129/185 (69%), Gaps = 4/185 (2%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            QELEASR + +KD+KA RLAEMNRKN+ EN K+AS LKP+N +LKAG+AGYDPFSRRWTR
Sbjct: 449  QELEASRQSQEKDSKAIRLAEMNRKNRFENFKNASGLKPINTNLKAGEAGYDPFSRRWTR 508

Query: 366  SRNYYASSKAGG----EDEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGK 199
            SRNYY     GG    EDE  E   G      +    K+ G+  V+ T         AGK
Sbjct: 509  SRNYYVGKPGGGDEAAEDETAEAANGFLGASNDKAEAKVMGEFGVKATAAALEAAAGAGK 568

Query: 198  LVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPED 19
            LVDT APVD+ATE   LHNFELPISLA L+KFGGP GA   Y ARKQ+IEAT+G +VPED
Sbjct: 569  LVDTRAPVDQATEAYTLHNFELPISLAGLQKFGGPHGAPAAYSARKQKIEATLGYKVPED 628

Query: 18   HGRKH 4
             G++H
Sbjct: 629  DGKRH 633


>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
            bretschneideri]
          Length = 657

 Score =  208 bits (529), Expect = 1e-51
 Identities = 111/184 (60%), Positives = 130/184 (70%), Gaps = 3/184 (1%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            Q+LEA R +  KD+KA RLAEMNRKN+VEN K+ASELKP N+ LKAG+AGYDPFSRRWTR
Sbjct: 458  QQLEARRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYDPFSRRWTR 517

Query: 366  SRNYYASSKAGGEDEAPEEKVGTSEV-DINLGGVKLAG--DASVEVTKXXXXXXXXAGKL 196
            SRNYY S     ++EA    V    + DI   G  + G   A +  T         AGKL
Sbjct: 518  SRNYYVSKPGEQKEEAEAIAVADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKL 577

Query: 195  VDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDH 16
            +DT APVD  TE N+ HNFELPISLA L+KFGGPQGA  G++ARKQRIEATVG QVPE+ 
Sbjct: 578  IDTSAPVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPEND 637

Query: 15   GRKH 4
            GR+H
Sbjct: 638  GRRH 641


>ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Malus
            domestica]
          Length = 657

 Score =  208 bits (529), Expect = 1e-51
 Identities = 111/184 (60%), Positives = 130/184 (70%), Gaps = 3/184 (1%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            Q+LEA R +  KD+KA RLAEMNRKN+VEN K+ASELKP N+ LKAG+AGYDPFSRRWTR
Sbjct: 458  QQLEARRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYDPFSRRWTR 517

Query: 366  SRNYYASSKAGGEDEAPEEKVGTSEV-DINLGGVKLAG--DASVEVTKXXXXXXXXAGKL 196
            SRNYY S     ++EA    V    + DI   G  + G   A +  T         AGKL
Sbjct: 518  SRNYYVSKPGEQKEEAEAIAVADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKL 577

Query: 195  VDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDH 16
            +DT APVD  TE N+ HNFELPISLA L+KFGGPQGA  G++ARKQRIEATVG QVPE+ 
Sbjct: 578  IDTSAPVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPEND 637

Query: 15   GRKH 4
            GR+H
Sbjct: 638  GRRH 641


>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
            curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
            JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score =  207 bits (528), Expect = 2e-51
 Identities = 109/182 (59%), Positives = 129/182 (70%), Gaps = 1/182 (0%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            QELEASR A +KD KA RLAEMNRKN+ EN ++ASELKPVN SLKAG+AGYDPFSRRWTR
Sbjct: 461  QELEASRQAQEKDAKAIRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTR 520

Query: 366  SRNYYASSKAGGEDEAPEEKVGTSEVDINLGGVK-LAGDASVEVTKXXXXXXXXAGKLVD 190
            SRNYY S   G +  A     GT+ V  + G       +A +  T         AGKLVD
Sbjct: 521  SRNYYVSKPGGADVAAEANNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVD 580

Query: 189  TGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHGR 10
            T APVD+ TE N LH+F+LPISL  L+KFGG +GA  G+MARKQ+IEATVG +VPE+ GR
Sbjct: 581  TAAPVDQGTESNTLHDFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGR 640

Query: 9    KH 4
            +H
Sbjct: 641  RH 642


>ref|XP_014509564.1| PREDICTED: protein RTF1 homolog [Vigna radiata var. radiata]
            gi|951010508|ref|XP_014509566.1| PREDICTED: protein RTF1
            homolog [Vigna radiata var. radiata]
          Length = 657

 Score =  207 bits (526), Expect = 3e-51
 Identities = 113/183 (61%), Positives = 130/183 (71%), Gaps = 2/183 (1%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            QELEASR A  KD KA +LAEMNRKN+ EN K+ASELKPVN  LKAG+AGYDPFSRRWTR
Sbjct: 460  QELEASRQAKQKDAKALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTR 519

Query: 366  SRNYYASSKAGGEDEAPEEKVGTSEV--DINLGGVKLAGDASVEVTKXXXXXXXXAGKLV 193
            SRNYYA +K G +  A    V    V    N  GV +  +A +  T         AGKLV
Sbjct: 520  SRNYYA-AKPGEKAAAGNNSVNGVVVGPGSNSAGVPVTAEAGMVATAAALEAAADAGKLV 578

Query: 192  DTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHG 13
            DT APVD+ TE N+LHNFELPISLA L+K+GG QGA  G+MARKQRIEATVG +V E+ G
Sbjct: 579  DTSAPVDQGTESNMLHNFELPISLALLQKYGGAQGAQAGFMARKQRIEATVGFRVSENDG 638

Query: 12   RKH 4
            R+H
Sbjct: 639  RRH 641


>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
            vinifera]
          Length = 658

 Score =  207 bits (526), Expect = 3e-51
 Identities = 115/188 (61%), Positives = 131/188 (69%), Gaps = 7/188 (3%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            Q+LEASR + +KD KA RLAEMNRKN+ EN K+ASE K VN SLKAG+AGYDPFSRRWTR
Sbjct: 459  QQLEASRRSKEKDAKAIRLAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDPFSRRWTR 518

Query: 366  SRNYYASSKAGGED-------EAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXX 208
            SRNYY S   GG++       EAP   VG      N  G K   +  V  T         
Sbjct: 519  SRNYYVSKPGGGDEAAAVANGEAPAAFVGAGS---NGTGGK-GAEVGVAATAAALEAAAD 574

Query: 207  AGKLVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQV 28
            AGKLVDT APVD+ TE N LH+FELPISLA L+KFGGPQGA  G+MARKQRIEATVG +V
Sbjct: 575  AGKLVDTSAPVDQGTESNTLHDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRV 634

Query: 27   PEDHGRKH 4
            PE+ GR+H
Sbjct: 635  PENDGRRH 642


>ref|XP_010100559.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
            gi|587894274|gb|EXB82802.1| RNA polymerase-associated
            protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  206 bits (524), Expect = 6e-51
 Identities = 112/185 (60%), Positives = 131/185 (70%), Gaps = 4/185 (2%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            QELEASR A   D KA RLAEMNRKN+VEN K+ASELKPVN  LKAG+AGYDPFSRRWTR
Sbjct: 459  QELEASRKAKQTDAKAIRLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTR 518

Query: 366  SRNYYASSKAGGEDEAPEEKVG----TSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGK 199
            SRNYY   K G   E      G    +++ + N     +A +A +  T+        AGK
Sbjct: 519  SRNYYV-GKPGEVKEDSGANAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGK 577

Query: 198  LVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPED 19
            LVDT APVD+ T  N+LHNFELPISL+ L+KFGGPQGA  G+MARKQRIEATVG +VPE+
Sbjct: 578  LVDTNAPVDQGTVSNMLHNFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPEN 637

Query: 18   HGRKH 4
             GR+H
Sbjct: 638  DGRRH 642


>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttatus]
          Length = 623

 Score =  206 bits (524), Expect = 6e-51
 Identities = 112/182 (61%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
 Frame = -1

Query: 546 QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
           QELE+SR A +K++KA +LAEMNRKN+VEN K+ASE+KPV + LKAG+AGYDPFSRRWTR
Sbjct: 436 QELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTIGLKAGEAGYDPFSRRWTR 495

Query: 366 SRNYYASSKAGG-EDEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGKLVD 190
           SRNYY  +  GG E E   E  G        GG  L G A+ E           AGKLVD
Sbjct: 496 SRNYYVGNSGGGVEAEVAVETNGG-------GGAALPGLAATEAA---LVAAAGAGKLVD 545

Query: 189 TGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHGR 10
           T APVD+ TE N+LHNFELPISLA L+KFGGPQG   G+MARKQRIEAT+G +VPE+ GR
Sbjct: 546 TMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKVPENDGR 605

Query: 9   KH 4
           +H
Sbjct: 606 RH 607


>ref|XP_011047833.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2
            [Populus euphratica] gi|743908750|ref|XP_011047834.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Populus euphratica]
            gi|743908752|ref|XP_011047836.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog isoform X2
            [Populus euphratica]
          Length = 666

 Score =  206 bits (524), Expect = 6e-51
 Identities = 112/187 (59%), Positives = 129/187 (68%), Gaps = 7/187 (3%)
 Frame = -1

Query: 543  ELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTRS 364
            ELEASR A  KD KA RLAEMNRKN+VEN ++ASELKP+N  LKAG+AGYDPFSRRWTRS
Sbjct: 467  ELEASRQAKVKDAKAIRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRS 526

Query: 363  RNYYASSKAGGED-------EAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXA 205
            RNYY S+ AGG D       EA +         +  G + ++G   V  T         A
Sbjct: 527  RNYYVSNPAGGADAAAASNSEANDTAAVADSHHVVAGAMSVSG---VAATAAALDAAADA 583

Query: 204  GKLVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVP 25
            GKLVDT APVD+ TE N +HNFEL ISL  L+KF GPQGAH G+MARKQRIEATVG QV 
Sbjct: 584  GKLVDTSAPVDQGTESNTMHNFELEISLIALQKFRGPQGAHAGFMARKQRIEATVGCQVR 643

Query: 24   EDHGRKH 4
            E+ GR+H
Sbjct: 644  ENDGRRH 650


>ref|XP_011047832.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Populus euphratica]
          Length = 695

 Score =  206 bits (524), Expect = 6e-51
 Identities = 112/187 (59%), Positives = 129/187 (68%), Gaps = 7/187 (3%)
 Frame = -1

Query: 543  ELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTRS 364
            ELEASR A  KD KA RLAEMNRKN+VEN ++ASELKP+N  LKAG+AGYDPFSRRWTRS
Sbjct: 496  ELEASRQAKVKDAKAIRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRS 555

Query: 363  RNYYASSKAGGED-------EAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXA 205
            RNYY S+ AGG D       EA +         +  G + ++G   V  T         A
Sbjct: 556  RNYYVSNPAGGADAAAASNSEANDTAAVADSHHVVAGAMSVSG---VAATAAALDAAADA 612

Query: 204  GKLVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVP 25
            GKLVDT APVD+ TE N +HNFEL ISL  L+KF GPQGAH G+MARKQRIEATVG QV 
Sbjct: 613  GKLVDTSAPVDQGTESNTMHNFELEISLIALQKFRGPQGAHAGFMARKQRIEATVGCQVR 672

Query: 24   EDHGRKH 4
            E+ GR+H
Sbjct: 673  ENDGRRH 679


>ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
            bretschneideri]
          Length = 657

 Score =  206 bits (524), Expect = 6e-51
 Identities = 110/186 (59%), Positives = 132/186 (70%), Gaps = 5/186 (2%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            Q+LEA R +  KD+KA RLAEMNRKN+VEN K+ASELKP N+ LKAG+AGYDPFSRRWTR
Sbjct: 458  QQLEARRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYDPFSRRWTR 517

Query: 366  SRNYYASSKAGGEDEAPEEKVGTSE---VDINLGGVKLAG--DASVEVTKXXXXXXXXAG 202
            SRNYY S    GE +   E +  ++   VDI   G  + G   A +  T         AG
Sbjct: 518  SRNYYVSKP--GEQKEEAEAIAVADGALVDIESNGTAVVGAVRAGMAATAAALEAAAGAG 575

Query: 201  KLVDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPE 22
            KL+DT AP+D  TE N+ H+FELPISLA L+KFGGPQGA  G++ARKQRIEATVG QVPE
Sbjct: 576  KLIDTSAPLDFGTESNLKHDFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPE 635

Query: 21   DHGRKH 4
            + GR+H
Sbjct: 636  NDGRRH 641


>ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Eucalyptus
            grandis] gi|629109481|gb|KCW74627.1| hypothetical protein
            EUGRSUZ_E03353 [Eucalyptus grandis]
          Length = 653

 Score =  206 bits (524), Expect = 6e-51
 Identities = 110/183 (60%), Positives = 130/183 (71%), Gaps = 2/183 (1%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            Q+LEA+R A   D KA +LAEMNRKN+VEN K+ASELKPVN  LKAG+AGYDPFSRRWTR
Sbjct: 455  QQLEATRQAQKTDAKAIKLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTR 514

Query: 366  SRNYYASSKAGGEDE--APEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGKLV 193
            SRNYY S   GG +   A +     S V  + G V +  ++ V  T         AGKLV
Sbjct: 515  SRNYYVSKPNGGSEAGGANDNVNVASMVAESNGSVPVVSESGVVATVEALEAAADAGKLV 574

Query: 192  DTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHG 13
            DT APVD+ TE N+LHNFELPISL  L+KFGG QGA  G+M+RKQRIEATVG +VPE+ G
Sbjct: 575  DTNAPVDQGTESNLLHNFELPISLNVLRKFGGAQGALTGFMSRKQRIEATVGCRVPENDG 634

Query: 12   RKH 4
            R+H
Sbjct: 635  RRH 637


>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
          Length = 606

 Score =  206 bits (524), Expect = 6e-51
 Identities = 112/182 (61%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
 Frame = -1

Query: 546 QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
           QELE+SR A +K++KA +LAEMNRKN+VEN K+ASE+KPV + LKAG+AGYDPFSRRWTR
Sbjct: 419 QELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTIGLKAGEAGYDPFSRRWTR 478

Query: 366 SRNYYASSKAGG-EDEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGKLVD 190
           SRNYY  +  GG E E   E  G        GG  L G A+ E           AGKLVD
Sbjct: 479 SRNYYVGNSGGGVEAEVAVETNGG-------GGAALPGLAATEAA---LVAAAGAGKLVD 528

Query: 189 TGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHGR 10
           T APVD+ TE N+LHNFELPISLA L+KFGGPQG   G+MARKQRIEAT+G +VPE+ GR
Sbjct: 529 TMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKVPENDGR 588

Query: 9   KH 4
           +H
Sbjct: 589 RH 590


>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
            tomentosiformis]
          Length = 654

 Score =  206 bits (523), Expect = 7e-51
 Identities = 108/181 (59%), Positives = 128/181 (70%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            QELEASR A +KD KA RLAEMNRKN+VEN K+ASEL+PVN  LKAG+AGYDPFSRRWTR
Sbjct: 458  QELEASRKAQEKDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTR 517

Query: 366  SRNYYASSKAGGEDEAPEEKVGTSEVDINLGGVKLAGDASVEVTKXXXXXXXXAGKLVDT 187
            S NY+A S     + A   +   +   ++  G     D  +E T         AGKLVDT
Sbjct: 518  STNYFAKSANEAAEGASNGEAAAALAVVDNNGAGGIADGGMEATAAALQAAAGAGKLVDT 577

Query: 186  GAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDHGRK 7
             APVD  TE N LH+F+LPISLA L+KFGGPQG+  G+MARKQRIEATVG +VPE+ GR+
Sbjct: 578  IAPVDLGTESNTLHDFDLPISLAVLQKFGGPQGSQAGFMARKQRIEATVGCRVPENDGRR 637

Query: 6    H 4
            H
Sbjct: 638  H 638


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 [Fragaria vesca
            subsp. vesca]
          Length = 657

 Score =  206 bits (523), Expect = 7e-51
 Identities = 110/184 (59%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
 Frame = -1

Query: 546  QELEASRPAHDKDTKAFRLAEMNRKNKVENLKSASELKPVNMSLKAGDAGYDPFSRRWTR 367
            ++LEA + +  KD+KA RLAEMNRKN+V+N K+AS LKPV   LKAG+AGYDPFSRRWTR
Sbjct: 458  EQLEARQQSQGKDSKAVRLAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTR 517

Query: 366  SRNYYASSKAGGEDEAPEEKVGT---SEVDINLGGVKLAGDASVEVTKXXXXXXXXAGKL 196
            SRNYY S     +D+A    V     +EV+ N  G  +A  A +E T         AGKL
Sbjct: 518  SRNYYVSKPDEQKDDAEANAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKL 577

Query: 195  VDTGAPVDKATEYNILHNFELPISLAKLKKFGGPQGAHLGYMARKQRIEATVGRQVPEDH 16
            +DT APVD+ T  N LHNFELPISLA L+KFGGPQGA  G+MARKQRIEATVG +VPED 
Sbjct: 578  IDTMAPVDQGTSSNPLHNFELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDD 637

Query: 15   GRKH 4
            GR+H
Sbjct: 638  GRRH 641