BLASTX nr result

ID: Ziziphus21_contig00026332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00026332
         (211 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300553.2| hypothetical protein POPTR_0001s46420g [Popu...    63   8e-08
ref|XP_010098509.1| hypothetical protein L484_025948 [Morus nota...    61   3e-07
ref|XP_011005325.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_011005323.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06

>ref|XP_002300553.2| hypothetical protein POPTR_0001s46420g [Populus trichocarpa]
           gi|550350020|gb|EEE85358.2| hypothetical protein
           POPTR_0001s46420g [Populus trichocarpa]
          Length = 1112

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = -3

Query: 200 GSDGVLEKEFEFKPSFDEYLKVMESVRTVKDRNQGIGSKEQKSMKGLKDKVEGN 39
           GS GV+EKEFEFKPSF EYLK MESV+T +++NQ   S   K    LKD +EGN
Sbjct: 22  GSGGVIEKEFEFKPSFGEYLKAMESVKTGREKNQVHKSNSSK----LKDDLEGN 71


>ref|XP_010098509.1| hypothetical protein L484_025948 [Morus notabilis]
           gi|587886364|gb|EXB75169.1| hypothetical protein
           L484_025948 [Morus notabilis]
          Length = 884

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 8/66 (12%)
 Frame = -3

Query: 203 GGSDG------VLEKEFEFKPSFDEYLKVMESVRTVKDRNQGIGSKEQKSMKGLKDKV-- 48
           GGSD       +LEKEFEFKPSFD+YLKVMESVRTV+D       K+QKS   L++    
Sbjct: 67  GGSDSKLVGGSLLEKEFEFKPSFDDYLKVMESVRTVRD-------KKQKSTHNLRETFLS 119

Query: 47  EGNAEN 30
           EGN E+
Sbjct: 120 EGNEES 125


>ref|XP_011005325.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic isoform X2 [Populus euphratica]
          Length = 1025

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = -3

Query: 200 GSDGVLEKEFEFKPSFDEYLKVMESVRTVKDRNQGIGSKEQKSMKGLKDKVEGN 39
           G  GV+EKE EFKPSF EYLK MESV+T +++NQ   S   K    LKD +EGN
Sbjct: 78  GGGGVIEKELEFKPSFGEYLKAMESVKTGREKNQVHKSNSYK----LKDDLEGN 127


>ref|XP_011005323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic isoform X1 [Populus euphratica]
           gi|743922503|ref|XP_011005324.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic isoform X1 [Populus euphratica]
          Length = 1142

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = -3

Query: 200 GSDGVLEKEFEFKPSFDEYLKVMESVRTVKDRNQGIGSKEQKSMKGLKDKVEGN 39
           G  GV+EKE EFKPSF EYLK MESV+T +++NQ   S   K    LKD +EGN
Sbjct: 78  GGGGVIEKELEFKPSFGEYLKAMESVKTGREKNQVHKSNSYK----LKDDLEGN 127


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