BLASTX nr result
ID: Ziziphus21_contig00025844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00025844
(533 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009139670.1| RNA polymerase beta (chloroplast) [Morus not... 349 4e-94
ref|YP_009175996.1| RNA polymerase beta (chloroplast) [Ficus rac... 348 7e-94
gb|ADD31177.1| RNA polymerase beta' subunit protein (chloroplast... 348 7e-94
ref|YP_762252.1| RNA polymerase beta' subunit-1 [Morus indica] g... 348 1e-93
gb|ALG63280.1| RNA polymerase beta' subunit (chloroplast) [Beta ... 343 2e-92
ref|YP_009136386.1| RNA polymerase beta' subunit (chloroplast) [... 343 2e-92
ref|YP_009136302.1| RNA polymerase beta' subunit (chloroplast) [... 343 2e-92
gb|AHY80532.1| RNA polymerase beta [Beta vulgaris subsp. vulgaris] 343 2e-92
ref|YP_009020029.1| RNA polymerase beta (plastid) [Prunus mume] ... 343 2e-92
ref|YP_005296091.1| rpoC1 gene product (chloroplast) [Pentactina... 343 2e-92
ref|YP_004021656.1| RNA polymerase beta [Prunus persica] gi|6282... 343 2e-92
gb|AFB77001.1| DNA-directed RNA polymerase beta' chain, partial ... 343 4e-92
gb|AFB76999.1| DNA-directed RNA polymerase beta' chain, partial ... 343 4e-92
gb|AFB77000.1| DNA-directed RNA polymerase beta' chain, partial ... 342 6e-92
gb|AIS35674.1| RNA polymerase beta (chloroplast) [Mesembryanthem... 341 1e-91
ref|YP_008965484.1| RNA polymerase beta [Pyrus spinosa] gi|56566... 341 1e-91
ref|YP_004842230.1| RNA polymerase beta' subunit [Pyrus pyrifoli... 341 1e-91
gb|AFB77004.1| DNA-directed RNA polymerase beta' chain, partial ... 341 1e-91
ref|NP_054923.1| RNA polymerase beta' subunit [Spinacia oleracea... 340 2e-91
ref|YP_004072453.1| RNA polymerase beta I subunit [Corynocarpus ... 340 2e-91
>ref|YP_009139670.1| RNA polymerase beta (chloroplast) [Morus notabilis]
gi|818638149|gb|AKF34033.1| RNA polymerase beta
(chloroplast) [Morus notabilis]
Length = 684
Score = 349 bits (896), Expect = 4e-94
Identities = 169/181 (93%), Positives = 173/181 (95%), Gaps = 4/181 (2%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEILQ+VMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 435 PVVWEILQDVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 494
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 495 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 554
Query: 173 YNPWNHRNYQNGRTDDNKY----TKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQ 6
YNP N+RNYQN R DDNKY TKEKEP FCNSYDAIGAYRQKRIHLDSPLWLRW+LDQ
Sbjct: 555 YNPCNYRNYQNERIDDNKYNYTKTKEKEPFFCNSYDAIGAYRQKRIHLDSPLWLRWRLDQ 614
Query: 5 R 3
R
Sbjct: 615 R 615
>ref|YP_009175996.1| RNA polymerase beta (chloroplast) [Ficus racemosa]
gi|937500934|gb|ALI30693.1| RNA polymerase beta
(chloroplast) [Ficus racemosa]
Length = 703
Score = 348 bits (894), Expect = 7e-94
Identities = 169/179 (94%), Positives = 173/179 (96%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 456 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 515
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 516 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 575
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP+N+RNYQN R DDN KYTKEKEP FCNSYDAIGAYRQKRI LDSPLWLRW+LDQR
Sbjct: 576 YNPYNYRNYQNRRIDDNNYKYTKEKEPFFCNSYDAIGAYRQKRILLDSPLWLRWRLDQR 634
>gb|ADD31177.1| RNA polymerase beta' subunit protein (chloroplast) [Ficus sp. Moore
315]
Length = 689
Score = 348 bits (894), Expect = 7e-94
Identities = 169/179 (94%), Positives = 173/179 (96%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 442 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 501
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 502 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 561
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP+N+RNYQN R DDN KYTKEKEP FCNSYDAIGAYRQKRI LDSPLWLRW+LDQR
Sbjct: 562 YNPYNYRNYQNRRIDDNNYKYTKEKEPFFCNSYDAIGAYRQKRILLDSPLWLRWRLDQR 620
>ref|YP_762252.1| RNA polymerase beta' subunit-1 [Morus indica]
gi|746948293|ref|YP_009110327.1| RNA polymerase beta
(chloroplast) [Morus mongolica]
gi|122166814|sp|Q09X26.1|RPOC1_MORIN RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|78100308|gb|ABB20949.1| RNA polymerase beta'
subunit-1 [Morus indica] gi|723005668|gb|AIX11653.1| RNA
polymerase beta (chloroplast) [Morus mongolica]
Length = 684
Score = 348 bits (892), Expect = 1e-93
Identities = 168/181 (92%), Positives = 173/181 (95%), Gaps = 4/181 (2%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEILQ+VMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 435 PVVWEILQDVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 494
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 495 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 554
Query: 173 YNPWNHRNYQNGRTDDNKY----TKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQ 6
YNP N+RNYQN R DDNKY T+EKEP FCNSYDAIGAYRQKRIHLDSPLWLRW+LDQ
Sbjct: 555 YNPCNYRNYQNERIDDNKYKYTKTQEKEPFFCNSYDAIGAYRQKRIHLDSPLWLRWRLDQ 614
Query: 5 R 3
R
Sbjct: 615 R 615
>gb|ALG63280.1| RNA polymerase beta' subunit (chloroplast) [Beta vulgaris subsp.
vulgaris]
Length = 677
Score = 343 bits (881), Expect = 2e-92
Identities = 161/177 (90%), Positives = 167/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 435 PIVWKILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 494
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLY+LTSGNRRGICANR
Sbjct: 495 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYILTSGNRRGICANR 554
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+ Y+N R DDN Y KEP FCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR
Sbjct: 555 YNPWNHKTYENDRIDDNNYKYMKEPFFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 611
>ref|YP_009136386.1| RNA polymerase beta' subunit (chloroplast) [Prunus maximowiczii]
gi|808178265|gb|AKC99596.1| RNA polymerase beta' subunit
(chloroplast) [Prunus maximowiczii]
gi|808178435|gb|AKC99764.1| RNA polymerase beta' subunit
(chloroplast) [Prunus serrulata var. spontanea]
Length = 683
Score = 343 bits (881), Expect = 2e-92
Identities = 167/179 (93%), Positives = 170/179 (94%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 436 PVVWEILHEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 495
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 496 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 555
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP N RNYQN R DDN KYTKEKEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 556 YNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 614
>ref|YP_009136302.1| RNA polymerase beta' subunit (chloroplast) [Prunus yedoensis]
gi|817527798|ref|YP_009136470.1| RNA polymerase beta'
subunit (chloroplast) [Prunus padus]
gi|808178180|gb|AKC99512.1| RNA polymerase beta' subunit
(chloroplast) [Prunus yedoensis]
gi|808178350|gb|AKC99680.1| RNA polymerase beta' subunit
(chloroplast) [Prunus padus] gi|808178520|gb|AKC99848.1|
RNA polymerase beta' subunit (chloroplast) [Prunus
subhirtella var. subhirtella]
gi|808178605|gb|AKC99932.1| RNA polymerase beta' subunit
(chloroplast) [Prunus subhirtella var. subhirtella]
Length = 683
Score = 343 bits (881), Expect = 2e-92
Identities = 167/179 (93%), Positives = 170/179 (94%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 436 PVVWEILHEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 495
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 496 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 555
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP N RNYQN R DDN KYTKEKEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 556 YNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 614
>gb|AHY80532.1| RNA polymerase beta [Beta vulgaris subsp. vulgaris]
Length = 681
Score = 343 bits (881), Expect = 2e-92
Identities = 161/177 (90%), Positives = 167/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 439 PIVWKILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 498
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLY+LTSGNRRGICANR
Sbjct: 499 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYILTSGNRRGICANR 558
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+ Y+N R DDN Y KEP FCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR
Sbjct: 559 YNPWNHKTYENDRIDDNNYKYMKEPFFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 615
>ref|YP_009020029.1| RNA polymerase beta (plastid) [Prunus mume]
gi|589061044|gb|AHK26865.1| RNA polymerase beta
(plastid) [Prunus mume]
Length = 683
Score = 343 bits (881), Expect = 2e-92
Identities = 167/179 (93%), Positives = 170/179 (94%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 436 PVVWEILHEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 495
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 496 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 555
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP N RNYQN R DDN KYTKEKEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 556 YNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 614
>ref|YP_005296091.1| rpoC1 gene product (chloroplast) [Pentactina rupicola]
gi|371532614|gb|AEX31724.1| RNA polymerase beta I
subunit (chloroplast) [Pentactina rupicola]
Length = 682
Score = 343 bits (881), Expect = 2e-92
Identities = 167/179 (93%), Positives = 171/179 (95%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 435 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 494
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 495 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 554
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP + RNYQN R DDN KYTKEKEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 555 YNPCHRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 613
>ref|YP_004021656.1| RNA polymerase beta [Prunus persica]
gi|628249155|ref|YP_009024672.1| RNA polymerase beta
(chloroplast) [Prunus kansuensis]
gi|309321425|gb|ADO64966.1| RNA polymerase beta [Prunus
persica] gi|597569097|gb|AHN13528.1| RNA polymerase beta
(chloroplast) [Prunus kansuensis]
Length = 683
Score = 343 bits (881), Expect = 2e-92
Identities = 167/179 (93%), Positives = 170/179 (94%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 436 PVVWEILHEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 495
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 496 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 555
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP N RNYQN R DDN KYTKEKEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 556 YNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 614
>gb|AFB77001.1| DNA-directed RNA polymerase beta' chain, partial (chloroplast)
[Maihuenia poeppigii]
Length = 668
Score = 343 bits (879), Expect = 4e-92
Identities = 162/177 (91%), Positives = 168/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 426 PVVWKILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 485
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQ+MLIGLYVLTSGNRRGICANR
Sbjct: 486 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQEMLIGLYVLTSGNRRGICANR 545
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+NYQN R DDN Y KEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 546 YNPWNHKNYQNERIDDNNYKYTKEPXFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 602
>gb|AFB76999.1| DNA-directed RNA polymerase beta' chain, partial (chloroplast)
[Anredera baselloides]
Length = 668
Score = 343 bits (879), Expect = 4e-92
Identities = 162/177 (91%), Positives = 168/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 426 PIVWKILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 485
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 486 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 545
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+NYQN R DDN Y KEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 546 YNPWNHKNYQNERFDDNNYKYTKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 602
>gb|AFB77000.1| DNA-directed RNA polymerase beta' chain, partial (chloroplast)
[Didierea madagascariensis]
Length = 668
Score = 342 bits (877), Expect = 6e-92
Identities = 161/177 (90%), Positives = 168/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 426 PIVWKILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 485
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDML+GLYVLTSGNRRGICANR
Sbjct: 486 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTSGNRRGICANR 545
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+NYQN R DDN Y KEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 546 YNPWNHKNYQNERIDDNNYKYTKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 602
>gb|AIS35674.1| RNA polymerase beta (chloroplast) [Mesembryanthemum crystallinum]
Length = 683
Score = 341 bits (875), Expect = 1e-91
Identities = 161/177 (90%), Positives = 167/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VW+ILQEV+QGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 438 PIVWKILQEVIQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 497
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPI VPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 498 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPICVPTQDMLIGLYVLTSGNRRGICANR 557
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+NYQN R DDN Y KEP FCNSYDAIGAYRQKRI+LDSPLWLRWQLDQR
Sbjct: 558 YNPWNHKNYQNERIDDNNYKYTKEPFFCNSYDAIGAYRQKRINLDSPLWLRWQLDQR 614
>ref|YP_008965484.1| RNA polymerase beta [Pyrus spinosa] gi|565666456|emb|CDI73556.1|
RNA polymerase beta [Pyrus spinosa]
Length = 687
Score = 341 bits (875), Expect = 1e-91
Identities = 164/177 (92%), Positives = 167/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 442 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 501
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 502 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 561
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP N RNYQN R DDN Y KEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 562 YNPCNRRNYQNKRIDDNNYKYTKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 618
>ref|YP_004842230.1| RNA polymerase beta' subunit [Pyrus pyrifolia]
gi|345433552|dbj|BAK69374.1| RNA polymerase beta'
subunit [Pyrus pyrifolia]
Length = 681
Score = 341 bits (875), Expect = 1e-91
Identities = 164/177 (92%), Positives = 167/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVC+GFNADFDGDQ
Sbjct: 436 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCKGFNADFDGDQ 495
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 496 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 555
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP N RNYQN R DDN Y KEP FCNSYDAIGAYRQKRI+LDSPLWLRW+LDQR
Sbjct: 556 YNPCNRRNYQNKRIDDNNYKYTKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQR 612
>gb|AFB77004.1| DNA-directed RNA polymerase beta' chain, partial (chloroplast)
[Portulacaria afra]
Length = 668
Score = 341 bits (874), Expect = 1e-91
Identities = 160/177 (90%), Positives = 167/177 (94%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 426 PIVWKILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 485
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGIC+NR
Sbjct: 486 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICSNR 545
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+NYQN R DDN Y KEP FCNSYDAIGAY QKRI+LDSPLWLRW+LDQR
Sbjct: 546 YNPWNHKNYQNERIDDNNYKYTKEPXFCNSYDAIGAYHQKRINLDSPLWLRWRLDQR 602
>ref|NP_054923.1| RNA polymerase beta' subunit [Spinacia oleracea]
gi|133438|sp|P11705.1|RPOC1_SPIOL RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|7636096|emb|CAB88716.1| RNA polymerase beta' subunit
(chloroplast) [Spinacia oleracea]
Length = 677
Score = 340 bits (873), Expect = 2e-91
Identities = 160/177 (90%), Positives = 165/177 (93%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VW+ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 435 PIVWKILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 494
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLY+LTSGNRRGICANR
Sbjct: 495 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYILTSGNRRGICANR 554
Query: 173 YNPWNHRNYQNGRTDDNKYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNPWNH+ YQN R DD Y KEP FCN YDAIGAYRQKRIHLDSPLWLRWQLDQR
Sbjct: 555 YNPWNHKTYQNERIDDTNYKSMKEPFFCNFYDAIGAYRQKRIHLDSPLWLRWQLDQR 611
>ref|YP_004072453.1| RNA polymerase beta I subunit [Corynocarpus laevigata]
gi|309252881|gb|ADO60301.1| RNA polymerase beta I
subunit (chloroplast) [Corynocarpus laevigata]
Length = 689
Score = 340 bits (873), Expect = 2e-91
Identities = 164/179 (91%), Positives = 170/179 (94%), Gaps = 2/179 (1%)
Frame = -1
Query: 533 PVVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGHAICLHPLVCRGFNADFDGDQ 354
P+VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVC+GFNADFDGDQ
Sbjct: 442 PIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 501
Query: 353 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 174
MAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 502 MAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 561
Query: 173 YNPWNHRNYQNGRTDDN--KYTKEKEPRFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQR 3
YNP N +N+QN + DDN KYTKEKEP FCNSYDAIGAYRQKRIHLDSPLWLRW+LDQR
Sbjct: 562 YNPCNRKNHQNEKIDDNDYKYTKEKEPFFCNSYDAIGAYRQKRIHLDSPLWLRWRLDQR 620