BLASTX nr result
ID: Ziziphus21_contig00025669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00025669
(416 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 115 2e-32
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 113 2e-32
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 114 4e-32
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 114 1e-31
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 114 1e-31
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 109 1e-31
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 114 2e-31
ref|XP_013653992.1| PREDICTED: uncharacterized protein LOC106358... 113 2e-31
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 111 2e-31
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 112 3e-31
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 112 3e-31
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 112 3e-31
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 112 3e-31
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 108 4e-31
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 112 5e-31
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 112 8e-31
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 111 1e-30
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 105 2e-30
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 105 2e-30
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 105 2e-30
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 115 bits (287), Expect(2) = 2e-32
Identities = 58/100 (58%), Positives = 70/100 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q EG+DY EIFSP+V++T+IRV+LA+V FD ELEQ+D KT FLH ELEE I M QP
Sbjct: 976 GFSQREGVDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQP 1035
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMVD 6
EGF + K + C SPRQWYKRFDSFMV+
Sbjct: 1036 EGFVVPGKEK-FACSLKKSLYGLKQSPRQWYKRFDSFMVE 1074
Score = 51.2 bits (121), Expect(2) = 2e-32
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P +++V CKW++K KEG S+ E VR+KARLVAKG
Sbjct: 939 VRIPQGRKVVGCKWVFKRKEGTSEGESVRYKARLVAKG 976
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 113 bits (282), Expect(2) = 2e-32
Identities = 57/99 (57%), Positives = 71/99 (71%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q EGIDY E+FSP+VK+ +IRV+LA+V+ F+ EL+Q+D KT FLH LEE IYM+QP
Sbjct: 986 GFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQP 1045
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF +K D VC SPRQWYKRFD+FMV
Sbjct: 1046 EGFVDSEKS-DHVCFLKKSLYGLKQSPRQWYKRFDAFMV 1083
Score = 53.1 bits (126), Expect(2) = 2e-32
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
VP P + VDCKW++K+K+G+S EP ++K+RLVAKG
Sbjct: 949 VPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKG 986
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 114 bits (285), Expect(2) = 4e-32
Identities = 58/99 (58%), Positives = 68/99 (68%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G TQ EG+D+ EIFSP+VK+++IR++LA+V D ELEQMD KT FLH LEE I M QP
Sbjct: 886 GFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQP 945
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGFE K K D VC SPRQWY+RFD FMV
Sbjct: 946 EGFECKDK-EDYVCLLHKSLYGLKQSPRQWYRRFDDFMV 983
Score = 50.4 bits (119), Expect(2) = 4e-32
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
+P P N+ +++CKWI+K EG+ EP ++KARLVA+G
Sbjct: 849 IPNPGNKRLINCKWIFKRNEGIPDVEPPKYKARLVARG 886
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 114 bits (286), Expect(2) = 1e-31
Identities = 56/99 (56%), Positives = 71/99 (71%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ GID+ +IFSP+VK+++IR +L++V D+ELEQMD KT FLH ELEE IYM QP
Sbjct: 814 GYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 873
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K +LVC SPRQWYKRFDSFM+
Sbjct: 874 EGFVVPGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 911
Score = 48.9 bits (115), Expect(2) = 1e-31
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P + + CKWI+K KEGMS S+ R+KARLVAKG
Sbjct: 777 VKLPKENKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 814
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 114 bits (286), Expect(2) = 1e-31
Identities = 56/99 (56%), Positives = 71/99 (71%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ GID+ +IFSP+VK+++IR +L++V D+ELEQMD KT FLH ELEE IYM QP
Sbjct: 646 GYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 705
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K +LVC SPRQWYKRFDSFM+
Sbjct: 706 EGFVVPGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 743
Score = 48.9 bits (115), Expect(2) = 1e-31
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P + + CKWI+K KEGMS S+ R+KARLVAKG
Sbjct: 609 VKLPKENKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 646
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 109 bits (273), Expect(2) = 1e-31
Identities = 55/100 (55%), Positives = 70/100 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G TQ EG+DY+EIF+P+VK+T+IRV++++V D ELEQMD KT FLH +LEE +YM QP
Sbjct: 589 GYTQREGVDYQEIFAPVVKHTSIRVLMSVVVDQDMELEQMDVKTAFLHGDLEEELYMEQP 648
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMVD 6
EGF I K +D VC SPRQW KRF FM++
Sbjct: 649 EGF-ITDKTKDKVCLLKKSLYGLKQSPRQWNKRFGRFMME 687
Score = 53.5 bits (127), Expect(2) = 1e-31
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P N++I+ C+W++K+K G+ EPVRFKARLVAKG
Sbjct: 552 VDKPTNRKIIGCRWLFKLKSGIPGVEPVRFKARLVAKG 589
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 114 bits (285), Expect(2) = 2e-31
Identities = 55/99 (55%), Positives = 71/99 (71%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ GID+ ++FSP+VK+++IR +L++V D+ELEQMD KT FLH ELEE IYM QP
Sbjct: 797 GYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 856
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K +LVC SPRQWYKRFDSFM+
Sbjct: 857 EGFVVPGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 894
Score = 48.5 bits (114), Expect(2) = 2e-31
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -2
Query: 406 PANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
P ++ + CKWI+K KEGMS S+ R+KARLVAKG
Sbjct: 763 PKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 797
>ref|XP_013653992.1| PREDICTED: uncharacterized protein LOC106358726 [Brassica napus]
Length = 461
Score = 113 bits (282), Expect(2) = 2e-31
Identities = 58/99 (58%), Positives = 70/99 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q EG+DY EIFSP+V++T+IR++LA+V + D ELEQ+D KT FLH ELEE IYM QP
Sbjct: 316 GFSQREGVDYNEIFSPVVRHTSIRMLLAIVARQDLELEQLDVKTAFLHGELEEEIYMTQP 375
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF K D VC SPRQWYKRFDS+MV
Sbjct: 376 EGFLFPGK-EDHVCKLRKSLYGLKQSPRQWYKRFDSYMV 413
Score = 49.7 bits (117), Expect(2) = 2e-31
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P +++V CKWIYK+KEG S E V++K+R+VA+G
Sbjct: 279 VTLPPGRKVVTCKWIYKLKEGQSPEEGVKYKSRVVARG 316
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 111 bits (277), Expect(2) = 2e-31
Identities = 54/99 (54%), Positives = 68/99 (68%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ G+DY ++FSP+VK+++IR ++VT D ELEQ+D KT FLH ELEE IYM QP
Sbjct: 878 GFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQP 937
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K D VC SPRQWYKRFDSFM+
Sbjct: 938 EGFIVPGK-EDYVCKLKRSLYGLKQSPRQWYKRFDSFML 975
Score = 51.2 bits (121), Expect(2) = 2e-31
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P ++ V CKWI+K KEG+S SEP RFK RLVAKG
Sbjct: 841 VHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKG 878
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 112 bits (281), Expect(2) = 3e-31
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ GID+ ++FSP++K+++IR +L +V D+ELEQMD KT FLH ELEE IYM QP
Sbjct: 923 GYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 982
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K +LVC SPRQWYKRFDSFM+
Sbjct: 983 EGFVVLGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 1020
Score = 49.3 bits (116), Expect(2) = 3e-31
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P ++ + CKWI+K KEGMS S+ R+KARLVAKG
Sbjct: 886 VKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 923
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 112 bits (281), Expect(2) = 3e-31
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ GID+ ++FSP++K+++IR +L +V D+ELEQMD KT FLH ELEE IYM QP
Sbjct: 923 GYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 982
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K +LVC SPRQWYKRFDSFM+
Sbjct: 983 EGFVVLGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 1020
Score = 49.3 bits (116), Expect(2) = 3e-31
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P ++ + CKWI+K KEGMS S+ R+KARLVAKG
Sbjct: 886 VKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 923
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 112 bits (280), Expect(2) = 3e-31
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ ID+ ++FSP+VK+++IR +L++V D+ELEQMD KT FLH ELEE IYM QP
Sbjct: 630 GYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 689
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K +LVC SPRQWYKRFDSFM+
Sbjct: 690 EGFVVPGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 727
Score = 49.7 bits (117), Expect(2) = 3e-31
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P ++ + CKWI+K KEGMS S+ R+KARLVAKG
Sbjct: 593 VKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKG 630
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 112 bits (279), Expect(2) = 3e-31
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G TQ EG+DY+EIF+P+VK+T IR+++++V D ELEQMD KT FLH ELEE +YM QP
Sbjct: 142 GYTQREGVDYQEIFAPVVKHTFIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQP 201
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMVD 6
EGF I + G++ VC SPRQW KRF+ FM+D
Sbjct: 202 EGF-ISEDGKNKVCLLKKLLYGLKQSPRQWNKRFNRFMID 240
Score = 50.1 bits (118), Expect(2) = 3e-31
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P +++I+ C+W++K+K G+ EPVR+KARLVAKG
Sbjct: 105 VDKPQDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKG 142
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 108 bits (271), Expect(2) = 4e-31
Identities = 53/99 (53%), Positives = 67/99 (67%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ G+DY ++FSP+VK+++IR ++V D ELEQ+D KT FLH ELEE IYM QP
Sbjct: 878 GFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQP 937
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K D VC SPRQWYKRFDSFM+
Sbjct: 938 EGFIVPGK-EDYVCKLKRSLYGLKQSPRQWYKRFDSFML 975
Score = 52.8 bits (125), Expect(2) = 4e-31
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P ++ V CKWI+K KEG+S SEP RFKARLVAKG
Sbjct: 841 VHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKG 878
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 112 bits (279), Expect(2) = 5e-31
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ GID+ ++FSP+VK+++IR +L +V D+ELEQM+ KT FLH ELEE IYM QP
Sbjct: 860 GYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQP 919
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K +LVC SPRQWYKRFDSFM+
Sbjct: 920 EGFVVPGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 957
Score = 49.3 bits (116), Expect(2) = 5e-31
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P ++ + CKWI+K KEGMS S+ R+KARLVAKG
Sbjct: 823 VKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 860
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 112 bits (281), Expect(2) = 8e-31
Identities = 54/99 (54%), Positives = 71/99 (71%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ GID+ ++FSP+VK+++IR +L++V D+ELEQMD KT FLH ELEE IYM QP
Sbjct: 1095 GYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 1154
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
+GF + K +LVC SPRQWYKRFDSFM+
Sbjct: 1155 KGFVVPGK-ENLVCRLKKSLYGLKQSPRQWYKRFDSFML 1192
Score = 47.8 bits (112), Expect(2) = 8e-31
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
V P ++ + CKWI+K KEG+S S+ R+KARL+AKG
Sbjct: 1058 VKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKG 1095
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 111 bits (278), Expect(2) = 1e-30
Identities = 56/99 (56%), Positives = 70/99 (70%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G Q EG+DY EIFSP+V++T+IRV+LA+V + ELEQ+D KT FLH ELEE IYM QP
Sbjct: 863 GFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQP 922
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
+GF++ K + VC SPRQWYKRFDS+MV
Sbjct: 923 DGFQVPGK-ENHVCKLKKSLYGLKQSPRQWYKRFDSYMV 960
Score = 48.5 bits (114), Expect(2) = 1e-30
Identities = 18/35 (51%), Positives = 30/35 (85%)
Frame = -2
Query: 406 PANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
P+ ++I+ CKW++K KEG+S +E V++KAR+VA+G
Sbjct: 829 PSGRKIITCKWVFKKKEGISPAEGVKYKARVVARG 863
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 105 bits (261), Expect(2) = 2e-30
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ G+DY ++FSP+VK+++IR L++V D ELEQ+D KT FLH ELEE IYM QP
Sbjct: 889 GYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQP 948
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K + VC SPRQW KRFDSFM+
Sbjct: 949 EGFIVPGKEK-YVCKLKRSLYGLKQSPRQWNKRFDSFML 986
Score = 54.3 bits (129), Expect(2) = 2e-30
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
VP P ++ + CKWI+K KEG+S SEP ++KARLVA+G
Sbjct: 852 VPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARG 889
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 105 bits (261), Expect(2) = 2e-30
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ G+DY ++FSP+VK+++IR L++V D ELEQ+D KT FLH ELEE IYM QP
Sbjct: 889 GYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQP 948
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K + VC SPRQW KRFDSFM+
Sbjct: 949 EGFIVPGKEK-YVCKLKRSLYGLKQSPRQWNKRFDSFML 986
Score = 54.3 bits (129), Expect(2) = 2e-30
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
VP P ++ + CKWI+K KEG+S SEP ++KARLVA+G
Sbjct: 852 VPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARG 889
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 105 bits (261), Expect(2) = 2e-30
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = -1
Query: 305 GVTQVEGIDYKEIFSPLVKYTTIRVMLALVTQFDWELEQMDAKTVFLHVELEETIYMRQP 126
G +Q+ G+DY ++FSP+VK+++IR L++V D ELEQ+D KT FLH ELEE IYM QP
Sbjct: 889 GYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQP 948
Query: 125 EGFEIKKKGRDLVCXXXXXXXXXXXSPRQWYKRFDSFMV 9
EGF + K + VC SPRQW KRFDSFM+
Sbjct: 949 EGFIVPGKEK-YVCKLKRSLYGLKQSPRQWNKRFDSFML 986
Score = 54.3 bits (129), Expect(2) = 2e-30
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 415 VPAPANQEIVDCKWIYKVKEGMSKSEPVRFKARLVAKG 302
VP P ++ + CKWI+K KEG+S SEP ++KARLVA+G
Sbjct: 852 VPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARG 889