BLASTX nr result

ID: Ziziphus21_contig00023810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00023810
         (352 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010103277.1| F-box/WD-40 repeat-containing protein [Morus...    60   6e-07
ref|XP_008356750.1| PREDICTED: F-box/WD-40 repeat-containing pro...    58   2e-06
ref|XP_011466856.1| PREDICTED: F-box/WD-40 repeat-containing pro...    57   7e-06
ref|XP_004303116.1| PREDICTED: F-box/WD-40 repeat-containing pro...    57   7e-06

>ref|XP_010103277.1| F-box/WD-40 repeat-containing protein [Morus notabilis]
           gi|587907288|gb|EXB95302.1| F-box/WD-40
           repeat-containing protein [Morus notabilis]
          Length = 424

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 31/53 (58%), Positives = 33/53 (62%)
 Frame = -2

Query: 249 MDQTPIGDKKXXXXXXXXXXXXXVHSLEHDILCFIFSFLDFFDLVRCSVVCKS 91
           MD TP G+KK              HSLEHDILC +FSFLD FDLVR S VCKS
Sbjct: 1   MDPTPAGNKKRHGGPTTI------HSLEHDILCIVFSFLDLFDLVRSSAVCKS 47


>ref|XP_008356750.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Malus domestica]
          Length = 432

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/53 (52%), Positives = 33/53 (62%)
 Frame = -2

Query: 249 MDQTPIGDKKXXXXXXXXXXXXXVHSLEHDILCFIFSFLDFFDLVRCSVVCKS 91
           MD +  GDKK             +HSL+H+ILC IFSFLDFFDL  CS VCK+
Sbjct: 1   MDISLTGDKKRRSSSSRARSPTTIHSLQHEILCTIFSFLDFFDLASCSAVCKT 53


>ref|XP_011466856.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 isoform
           X2 [Fragaria vesca subsp. vesca]
          Length = 407

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -2

Query: 174 SLEHDILCFIFSFLDFFDLVRCSVVCKS*TQVKIGSSIVLE 52
           SL+HDILC IFSFLDFFDL RCSVVCK+ + + I  S +LE
Sbjct: 24  SLDHDILCIIFSFLDFFDLARCSVVCKTWSGI-INKSKLLE 63


>ref|XP_004303116.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 isoform
           X1 [Fragaria vesca subsp. vesca]
          Length = 437

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -2

Query: 174 SLEHDILCFIFSFLDFFDLVRCSVVCKS*TQVKIGSSIVLE 52
           SL+HDILC IFSFLDFFDL RCSVVCK+ + + I  S +LE
Sbjct: 24  SLDHDILCIIFSFLDFFDLARCSVVCKTWSGI-INKSKLLE 63


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