BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00018104
         (1305 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   685   0.0  
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   680   0.0  
ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V sub...   678   0.0  
ref|XP_008375474.1| PREDICTED: DNA-directed RNA polymerase V sub...   677   0.0  
ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V sub...   677   0.0  
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...   674   0.0  
gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]      674   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   673   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   673   0.0  
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub...   672   0.0  
ref|XP_010095982.1| DNA-directed RNA polymerase E subunit 1 [Mor...   669   0.0  
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub...   668   0.0  
ref|XP_008348950.1| PREDICTED: DNA-directed RNA polymerase V sub...   664   0.0  
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub...   664   0.0  
gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium r...   664   0.0  
gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium r...   664   0.0  
ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V sub...   664   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   664   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              662   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...   662   0.0  

>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 991

 Score =  685 bits (1768), Expect = 0.0
 Identities = 338/436 (77%), Positives = 390/436 (89%), Gaps = 2/436 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV+E+L+R+ +D+RKKL  KG+ PQDGY+M+Y+PVPPNCLSVP+ISDGV+VMS+D 
Sbjct: 177  LLPCEVLEMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDL 236

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++MLKKVLKQ+EIIKSSRSG PNFE+HEVEA +LQ AVDQYLQ+RGT K  RD+  + G
Sbjct: 237  SISMLKKVLKQVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFG 296

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V KE+++S TKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIGIP EIA RITFEE+
Sbjct: 297  VHKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRITFEER 356

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM YLQELVDNKLCLTY+DGSSTYSLREGSKGHT LRLGQ+VHRRIMDGD+VF+NR
Sbjct: 357  VNAHNMQYLQELVDNKLCLTYRDGSSTYSLREGSKGHTFLRLGQIVHRRIMDGDMVFINR 416

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHD HTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 417  PPTTHKHSLQALSVYVHDGHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 476

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMF-ASSSLPQPAFLKAY 231
            VEKQLLSSH+G LNLQL +DSLLSLK +FN+YF+D+AAAQQLAMF +SSSLPQPA  KA+
Sbjct: 477  VEKQLLSSHSGNLNLQLTSDSLLSLKTMFNTYFLDRAAAQQLAMFVSSSSLPQPALWKAH 536

Query: 230  SSKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERG 51
             S   WTALQILQTALP+ FDCS ERYLI  +DI+++D +RD++  VIND+  S+FFE+G
Sbjct: 537  CSVPIWTALQILQTALPSQFDCSGERYLISNTDIVKVDFSRDVVQAVINDIVISMFFEKG 596

Query: 50   SEEVLKFFNSLQPLLM 3
             + V KFFNSLQPLLM
Sbjct: 597  PDAVFKFFNSLQPLLM 612


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  680 bits (1754), Expect = 0.0
 Identities = 336/435 (77%), Positives = 387/435 (88%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVME+LKR+ +++RKKL AKG+ PQDGY++  +PVPPNCLSVPEISDGV+VMS DP
Sbjct: 178  LLPCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADP 237

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++MLKKVLKQ+EII+SSRSG PNFE+  VEANELQ  +DQYLQ+RGT K +RD+DA+ G
Sbjct: 238  SISMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFG 297

Query: 944  VSKEAS-NSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+KE + +STKAWL+KMRTLFIRKGSGFSSRSVITGDA++ V+E+GIP EIA RITFEEK
Sbjct: 298  VNKELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEK 357

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V++HN+ YLQELVD+KLCLTYKDGSSTYSLREGSKGHT LR GQVVHRRIMDGDLVFVNR
Sbjct: 358  VNDHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNR 417

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL+VYVHDDH VKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 418  PPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 477

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G  NLQLA D+LLSLK +F  YF+DKAAAQQLAMFASSSLP+PA LKA S
Sbjct: 478  VEKQLLSSHSGKPNLQLAADALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANS 537

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            +   WTA QILQTALPA FDCS + YL+  S+IL +D +   +  V+ND+ATS+FFE+G 
Sbjct: 538  AHSYWTAFQILQTALPAHFDCSGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGG 597

Query: 47   EEVLKFFNSLQPLLM 3
            E+VLKFF+SLQPLLM
Sbjct: 598  EDVLKFFDSLQPLLM 612


>ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Prunus mume]
          Length = 1855

 Score =  678 bits (1750), Expect = 0.0
 Identities = 335/435 (77%), Positives = 386/435 (88%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVME+LKR+ +++RKKL AKG+ PQDGY++  +PVPPNCLSVPEISDGV+VMS DP
Sbjct: 178  LLPCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADP 237

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++MLKKVLKQ+EII+SSRSG PNFE+  VEANELQ  +DQYLQ+RGT K +RD+DA+ G
Sbjct: 238  SISMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFG 297

Query: 944  VSKEAS-NSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+KE + +STKAWL+KMRTLFIRKGSGFSSRSVITGDA++ V+E+GIP EIA RITFEEK
Sbjct: 298  VNKELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEK 357

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V++HN+ YLQELVD+KLCLTYKDGSSTYSLREGSKGHT LR GQVVHRRIMDGDLVFVNR
Sbjct: 358  VNDHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNR 417

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL+VYVHDDH VKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 418  PPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 477

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G  NLQLA D+LLSLK +F  YF+DKAAAQQLAMFASSSLP+PA LKA S
Sbjct: 478  VEKQLLSSHSGKPNLQLATDALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANS 537

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            +   WTA QILQTALPA FDC+ + YL+  S+IL +D +   +  V+ND+ATS+FFE+G 
Sbjct: 538  AHSYWTAFQILQTALPAHFDCNGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGG 597

Query: 47   EEVLKFFNSLQPLLM 3
            E VLKFF+SLQPLLM
Sbjct: 598  EAVLKFFDSLQPLLM 612


>ref|XP_008375474.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Malus
            domestica]
          Length = 1050

 Score =  677 bits (1748), Expect = 0.0
 Identities = 333/435 (76%), Positives = 391/435 (89%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV+E+LKR+ +D+R+KL AKG+ PQDGY+++++PVPPNCLSVPEISDGV+VMS DP
Sbjct: 178  LLPCEVLEMLKRIPQDTRRKLAAKGYFPQDGYILRHIPVPPNCLSVPEISDGVSVMSADP 237

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++ML+KVLKQIE+I+SSRSG PNFE+  VEANELQ  VDQYLQ+RGT K +RD+DA+LG
Sbjct: 238  SISMLRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDIDARLG 297

Query: 944  VSKEAS-NSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V++E + +STKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+E+GIP EIA RITFEEK
Sbjct: 298  VNRELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEVGIPYEIAQRITFEEK 357

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V++HN+ YLQELVD KLCLTY+DGSSTYSLREGSKGHT LR GQVVHRRI+DGDLVFVNR
Sbjct: 358  VNDHNIRYLQELVDKKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRILDGDLVFVNR 417

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL+VYVHDDH VKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 418  PPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 477

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G  NLQ+A DSLLSLK +F +YF+DK+AAQQLAMFASSSLP+PA LKA +
Sbjct: 478  VEKQLLSSHSGKPNLQMATDSLLSLKMMFKNYFLDKSAAQQLAMFASSSLPRPALLKANA 537

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            ++  WTALQILQTALPA FD   E+YL+  S+IL++D N   +  V+ND+ATS+FF +G 
Sbjct: 538  ARSYWTALQILQTALPAHFDYCGEKYLVSKSEILKIDFNTSEVSAVMNDVATSVFFVKGG 597

Query: 47   EEVLKFFNSLQPLLM 3
            E+VLKFF+SLQPLLM
Sbjct: 598  EDVLKFFDSLQPLLM 612


>ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus x
            bretschneideri] gi|694366759|ref|XP_009361959.1|
            PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus
            x bretschneideri]
          Length = 1960

 Score =  677 bits (1747), Expect = 0.0
 Identities = 332/435 (76%), Positives = 392/435 (90%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV+E+LKR+ +D+RKKL +KG+ PQDGY+++++PVPPNCLSVPEISDGV+VMS DP
Sbjct: 178  LLPCEVLEMLKRIPQDTRKKLASKGYFPQDGYILRHIPVPPNCLSVPEISDGVSVMSADP 237

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++ML+KVLKQIE+I+SSRSG PNFE+  VEANELQ  VDQYLQ+RGT K +RD+DA+LG
Sbjct: 238  SISMLRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDIDARLG 297

Query: 944  VSKEAS-NSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V++E + +STKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+E+GIP EIA RITFEEK
Sbjct: 298  VNRELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEVGIPYEIAQRITFEEK 357

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V++HN+ YLQ+LVD KLCLTY+DGSSTYSLREGSKGHT LR GQVVHRRI+DGDLVFVNR
Sbjct: 358  VNDHNIRYLQQLVDKKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRILDGDLVFVNR 417

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL+VYVHDDH VKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 418  PPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 477

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G  NLQ+A DSLLSLK +F +YF+DK+AAQQLAMFASSSLP+PA LKA +
Sbjct: 478  VEKQLLSSHSGKPNLQMATDSLLSLKMMFKNYFLDKSAAQQLAMFASSSLPRPALLKANA 537

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            ++  WTALQILQTALPA FD   E+YL+  S+IL++D +   +  V+ND+ATS+FFE+G 
Sbjct: 538  ARSYWTALQILQTALPAHFDYCGEKYLVNKSEILKIDFSTSEVSAVMNDVATSVFFEKGG 597

Query: 47   EEVLKFFNSLQPLLM 3
            E+VLKFF+SLQPLLM
Sbjct: 598  EDVLKFFDSLQPLLM 612


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
          Length = 1980

 Score =  674 bits (1739), Expect = 0.0
 Identities = 330/435 (75%), Positives = 383/435 (88%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVME+LKR+ +D+RKKL  KG+ PQ+GY+M+YLPVPPNCLSVP+ISDGV++MS+D 
Sbjct: 186  LLPCEVMEMLKRIPQDTRKKLARKGYFPQEGYIMRYLPVPPNCLSVPDISDGVSIMSSDL 245

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++MLKKVLKQ+EIIKSSRSGSPNFE+HEVEA +LQ AVDQYLQ+RGT K +RD++++ G
Sbjct: 246  SISMLKKVLKQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDVESRFG 305

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            + KE+++S TKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIGIP EIA RITFEE+
Sbjct: 306  IHKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFEER 365

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            VS HN+ YLQELVDNKLC+TY+DGSSTYSLR+GSKGHT LR GQVVHRRIMDGD VF+NR
Sbjct: 366  VSVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDTVFINR 425

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDC+HLFYPQSLAAKAEVLELFS
Sbjct: 426  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFS 485

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQL  DSLLSLK +F +YF+D+AAAQQLAMF S SLPQP   K   
Sbjct: 486  VEKQLLSSHSGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTLWKVPY 545

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            S   WT LQILQTALP+ FDC+ ERY I   DI+++D +RD++  VIN++  SIFFE+G 
Sbjct: 546  SDPIWTVLQILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIFFEKGP 605

Query: 47   EEVLKFFNSLQPLLM 3
            + V KFFNSLQPLLM
Sbjct: 606  DAVFKFFNSLQPLLM 620


>gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]
          Length = 1821

 Score =  674 bits (1739), Expect = 0.0
 Identities = 330/435 (75%), Positives = 383/435 (88%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVME+LKR+ +D+RKKL  KG+ PQ+GY+M+YLPVPPNCLSVP+ISDGV++MS+D 
Sbjct: 27   LLPCEVMEMLKRIPQDTRKKLARKGYFPQEGYIMRYLPVPPNCLSVPDISDGVSIMSSDL 86

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++MLKKVLKQ+EIIKSSRSGSPNFE+HEVEA +LQ AVDQYLQ+RGT K +RD++++ G
Sbjct: 87   SISMLKKVLKQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDVESRFG 146

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            + KE+++S TKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIGIP EIA RITFEE+
Sbjct: 147  IHKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFEER 206

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            VS HN+ YLQELVDNKLC+TY+DGSSTYSLR+GSKGHT LR GQVVHRRIMDGD VF+NR
Sbjct: 207  VSVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDTVFINR 266

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDC+HLFYPQSLAAKAEVLELFS
Sbjct: 267  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFS 326

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQL  DSLLSLK +F +YF+D+AAAQQLAMF S SLPQP   K   
Sbjct: 327  VEKQLLSSHSGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTLWKVPY 386

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            S   WT LQILQTALP+ FDC+ ERY I   DI+++D +RD++  VIN++  SIFFE+G 
Sbjct: 387  SDPIWTVLQILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIFFEKGP 446

Query: 47   EEVLKFFNSLQPLLM 3
            + V KFFNSLQPLLM
Sbjct: 447  DAVFKFFNSLQPLLM 461


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score =  673 bits (1736), Expect = 0.0
 Identities = 334/435 (76%), Positives = 381/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVMEILKR+  ++R+KL  KGF PQ+GY+++YLPVPPNCLSVP+ISDGV++MS+D 
Sbjct: 176  LLPCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDL 235

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S  MLKKVLKQ+EIIKSSRSG+PNFE+HEVEAN+LQ AV+QYLQ+RGT K +R++DA+ G
Sbjct: 236  STAMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYG 295

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            +SK+AS+S TKAWL+KMRTLFIRKGSGFSSR VITGD YK V+EIGIP EIA RITFEE+
Sbjct: 296  ISKDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEER 355

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM YLQ LVDNKLCLTY+DGSSTYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 356  VNMHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 415

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV ELFS
Sbjct: 416  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFS 475

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSHNG LNLQLA DSLLSL+ +  +    KA AQQL+MF SS+LPQPAFLK  S
Sbjct: 476  VEKQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNS 535

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
               CWTALQILQTA PA  DCS +RYLI  SDIL +D +RD++  VIN++ TSIFFE+G 
Sbjct: 536  FGPCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGP 595

Query: 47   EEVLKFFNSLQPLLM 3
            +EVL FF+SLQPLLM
Sbjct: 596  KEVLNFFDSLQPLLM 610


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  673 bits (1736), Expect = 0.0
 Identities = 334/435 (76%), Positives = 381/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVMEILKR+  ++R+KL  KGF PQ+GY+++YLPVPPNCLSVP+ISDGV++MS+D 
Sbjct: 176  LLPCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDL 235

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S  MLKKVLKQ+EIIKSSRSG+PNFE+HEVEAN+LQ AV+QYLQ+RGT K +R++DA+ G
Sbjct: 236  STAMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYG 295

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            +SK+AS+S TKAWL+KMRTLFIRKGSGFSSR VITGD YK V+EIGIP EIA RITFEE+
Sbjct: 296  ISKDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEER 355

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM YLQ LVDNKLCLTY+DGSSTYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 356  VNMHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 415

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV ELFS
Sbjct: 416  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFS 475

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSHNG LNLQLA DSLLSL+ +  +    KA AQQL+MF SS+LPQPAFLK  S
Sbjct: 476  VEKQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNS 535

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
               CWTALQILQTA PA  DCS +RYLI  SDIL +D +RD++  VIN++ TSIFFE+G 
Sbjct: 536  FGPCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGP 595

Query: 47   EEVLKFFNSLQPLLM 3
            +EVL FF+SLQPLLM
Sbjct: 596  KEVLNFFDSLQPLLM 610


>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
            gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis sativus]
            gi|700195913|gb|KGN51090.1| hypothetical protein
            Csa_5G435050 [Cucumis sativus]
          Length = 1963

 Score =  672 bits (1734), Expect = 0.0
 Identities = 329/435 (75%), Positives = 381/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV E+LK++  ++RKKL  +G+ PQDGY++QYLPVPPNCLSVPEISDGVTVMS+DP
Sbjct: 179  LLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDP 238

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            +++MLKK+LKQ+EIIK SRSG+PNFE+HEVEAN+LQLAVDQYLQ+RGT K +R +DA+ G
Sbjct: 239  AVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFG 298

Query: 944  VSKEASN-STKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+KE ++ STKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIG+P E+A RITFEE+
Sbjct: 299  VNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEER 358

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            VS HN+ YLQELVD KLCLTY+DGSS YSLREGS GHT L+ GQ+VHRRIMDGD+VF+NR
Sbjct: 359  VSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINR 418

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQALRVY+HDDH VKINPLICGPLSADFDGDCIHLFYPQS+AAKAEVL LFS
Sbjct: 419  PPTTHKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFS 478

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLANDSLLSLK +F  YF+ KAAAQQLAMF SS LP PA L   S
Sbjct: 479  VEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRS 538

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
                WTALQILQT LPA FDC  + YLIK S+ L+ D +RD +P +IN++ TSIFF++G 
Sbjct: 539  GSLHWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGP 598

Query: 47   EEVLKFFNSLQPLLM 3
            EEVLKFF+SLQPLLM
Sbjct: 599  EEVLKFFDSLQPLLM 613


>ref|XP_010095982.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
            gi|587873490|gb|EXB62675.1| DNA-directed RNA polymerase E
            subunit 1 [Morus notabilis]
          Length = 2054

 Score =  669 bits (1725), Expect = 0.0
 Identities = 338/435 (77%), Positives = 381/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVMEI K++ E++RKKLV KG+ PQDGY++QYLPVPPNCLSVPEISDG+T+MSTDP
Sbjct: 182  LLPCEVMEIFKKIPEETRKKLVGKGYFPQDGYILQYLPVPPNCLSVPEISDGITIMSTDP 241

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S +MLKKVL+Q EIIKSSRS  PNFE+ EVEANELQ  V+QYLQ+RG+ K +RD+DA+ G
Sbjct: 242  STSMLKKVLRQGEIIKSSRS-QPNFESLEVEANELQSIVNQYLQVRGSVKASRDIDARFG 300

Query: 944  VSKEASNST-KAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+KE  NS+ K WL+KMRTLFIRKGSGFSSRSVITGDAYK V+E+GIP EIA  ITFEEK
Sbjct: 301  VNKEEKNSSRKVWLEKMRTLFIRKGSGFSSRSVITGDAYKAVNEVGIPYEIARWITFEEK 360

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            VS HNM YLQELVDNKLCLTYKDGSSTYSLREGSKGHT L+LGQVVHRRIMDGD+VF+NR
Sbjct: 361  VSSHNMKYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLKLGQVVHRRIMDGDIVFINR 420

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQALRVYVH+D+TVKINPLICGPLSADFDGDC+HLFYPQS AAKAEVLELFS
Sbjct: 421  PPTTHKHSLQALRVYVHEDNTVKINPLICGPLSADFDGDCVHLFYPQSPAAKAEVLELFS 480

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            +EKQ+LSSH+G + LQLA DSLLSLK +F +YFMDK AAQQL MFASSSLPQPAF   +S
Sbjct: 481  LEKQILSSHSGGMILQLACDSLLSLKIMFKTYFMDKIAAQQLVMFASSSLPQPAFWLTHS 540

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
                WTALQ+LQTALP   DC  +R+LIKGSDIL LD NRD+   VIND+  SI  E+GS
Sbjct: 541  GDPFWTALQVLQTALPTSLDCYGDRFLIKGSDILVLDFNRDV--SVINDIGASICSEKGS 598

Query: 47   EEVLKFFNSLQPLLM 3
            EEVLKFFN+LQPLLM
Sbjct: 599  EEVLKFFNALQPLLM 613


>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
          Length = 1964

 Score =  668 bits (1724), Expect = 0.0
 Identities = 327/435 (75%), Positives = 380/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV E+LK++  ++RKKL  +G+ PQDGY++QYLPVPPNCLSVPEISDGVTVMS+DP
Sbjct: 179  LLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDP 238

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            +++MLKK+LKQ+EIIK SRSG+PNFE+HEVEAN+LQLAVDQYLQ+RGT K +R +DA+ G
Sbjct: 239  AVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFG 298

Query: 944  VSKEASN-STKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+KE ++ STKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIG+P E+A RITFEE+
Sbjct: 299  VNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEER 358

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            VS HN+ YLQELVD KLCLTY+DGSS YSLREGS GHT L+ GQ+VHRRIMDGD+VF+NR
Sbjct: 359  VSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINR 418

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQALRVY+HDDH VKINPLICG LSADFDGDCIHLFYPQS+AAKAEVL LFS
Sbjct: 419  PPTTHKHSLQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFS 478

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLANDSLLSLK +F  YF+ KAAAQQLAMF SS LP PA L   S
Sbjct: 479  VEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRS 538

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
                WTALQILQT LPA FDC  + YLIK S+ L+ D ++D +P +IN++ TSIFF++G 
Sbjct: 539  GSLHWTALQILQTVLPACFDCHGDSYLIKNSNFLKFDFDKDAMPSLINEILTSIFFQKGP 598

Query: 47   EEVLKFFNSLQPLLM 3
            EEVLKFF+SLQPLLM
Sbjct: 599  EEVLKFFDSLQPLLM 613


>ref|XP_008348950.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Malus
            domestica]
          Length = 1144

 Score =  664 bits (1714), Expect = 0.0
 Identities = 326/435 (74%), Positives = 389/435 (89%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEVME+LKR+ +D+RKKL A+G+ PQDGY+++++PVPPNCLSVPEISDGV+VMS DP
Sbjct: 178  LLPCEVMEMLKRIPQDTRKKLNARGYFPQDGYILRHIPVPPNCLSVPEISDGVSVMSADP 237

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++ML+KVLKQIE+I+SSRSG PNFE+  VEANELQ  VDQYLQ+RGT K +RD+DA+ G
Sbjct: 238  SISMLRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDIDARFG 297

Query: 944  VSKEAS-NSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+KE + +STKAWL+KMRTLFIRKGSGFSSRSVITGDA++ V+E+GIP EIA RITFEE+
Sbjct: 298  VNKELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEER 357

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V++HN+ YLQ+LVD+KLCLTY+DGSSTYSLREGSKGHT LR GQVVHRRIMDGDLVFVNR
Sbjct: 358  VNDHNIRYLQQLVDSKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNR 417

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL+VYVHDDH VKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 418  PPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 477

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G  NLQ+A DSLLSL+ +F ++F+DK+AAQQLAMFASS LP+PA LKA +
Sbjct: 478  VEKQLLSSHSGKPNLQMATDSLLSLRMMFKNFFLDKSAAQQLAMFASSLLPRPALLKANA 537

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            +   WTALQILQTALP  FD   E+YL+  S+IL+++ +   +  V+ND+ATS+FFE+G 
Sbjct: 538  ACSYWTALQILQTALPLDFDYCGEKYLVNKSEILKIEFSTSAVSAVMNDIATSVFFEKGG 597

Query: 47   EEVLKFFNSLQPLLM 3
            E+VLKFF+SLQPLLM
Sbjct: 598  EDVLKFFDSLQPLLM 612


>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Gossypium raimondii]
          Length = 1921

 Score =  664 bits (1713), Expect = 0.0
 Identities = 327/435 (75%), Positives = 380/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV+EILKR+   +R+KL  KGF PQ+GY++QYLPVPPNCLSVP++SDGV+VMS+D 
Sbjct: 175  LLPCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDL 234

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S +ML+KVLKQ+EIIKSSRSG+PNFE+HEVEAN+LQ AV+QYLQ+RGT K +R +DA+ G
Sbjct: 235  STSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYG 294

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+K+AS+S TKAWL+KMRTLFIRKGSGFSSRSVITGD YK V+EIGIP EIA RITFEE+
Sbjct: 295  VNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEER 354

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM YLQ LVDNKLCLTY+DG STYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 355  VNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 414

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSL+AKAEV ELFS
Sbjct: 415  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFS 474

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLA DSLLSL+ +  ++   KA AQQL+MF SS+LP+PAFLK   
Sbjct: 475  VEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNH 534

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
               CWTA QILQTA PA  DCSS+RYLI  SDIL++D N+D++  VIN++  SIF+E+G 
Sbjct: 535  VAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGP 594

Query: 47   EEVLKFFNSLQPLLM 3
            +EVL FF+SLQPLLM
Sbjct: 595  KEVLNFFDSLQPLLM 609


>gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1883

 Score =  664 bits (1713), Expect = 0.0
 Identities = 327/435 (75%), Positives = 380/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV+EILKR+   +R+KL  KGF PQ+GY++QYLPVPPNCLSVP++SDGV+VMS+D 
Sbjct: 175  LLPCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDL 234

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S +ML+KVLKQ+EIIKSSRSG+PNFE+HEVEAN+LQ AV+QYLQ+RGT K +R +DA+ G
Sbjct: 235  STSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYG 294

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+K+AS+S TKAWL+KMRTLFIRKGSGFSSRSVITGD YK V+EIGIP EIA RITFEE+
Sbjct: 295  VNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEER 354

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM YLQ LVDNKLCLTY+DG STYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 355  VNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 414

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSL+AKAEV ELFS
Sbjct: 415  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFS 474

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLA DSLLSL+ +  ++   KA AQQL+MF SS+LP+PAFLK   
Sbjct: 475  VEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNH 534

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
               CWTA QILQTA PA  DCSS+RYLI  SDIL++D N+D++  VIN++  SIF+E+G 
Sbjct: 535  VAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGP 594

Query: 47   EEVLKFFNSLQPLLM 3
            +EVL FF+SLQPLLM
Sbjct: 595  KEVLNFFDSLQPLLM 609


>gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1406

 Score =  664 bits (1713), Expect = 0.0
 Identities = 327/435 (75%), Positives = 380/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV+EILKR+   +R+KL  KGF PQ+GY++QYLPVPPNCLSVP++SDGV+VMS+D 
Sbjct: 175  LLPCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDL 234

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S +ML+KVLKQ+EIIKSSRSG+PNFE+HEVEAN+LQ AV+QYLQ+RGT K +R +DA+ G
Sbjct: 235  STSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYG 294

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+K+AS+S TKAWL+KMRTLFIRKGSGFSSRSVITGD YK V+EIGIP EIA RITFEE+
Sbjct: 295  VNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEER 354

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM YLQ LVDNKLCLTY+DG STYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 355  VNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 414

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSL+AKAEV ELFS
Sbjct: 415  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFS 474

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLA DSLLSL+ +  ++   KA AQQL+MF SS+LP+PAFLK   
Sbjct: 475  VEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNH 534

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
               CWTA QILQTA PA  DCSS+RYLI  SDIL++D N+D++  VIN++  SIF+E+G 
Sbjct: 535  VAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGP 594

Query: 47   EEVLKFFNSLQPLLM 3
            +EVL FF+SLQPLLM
Sbjct: 595  KEVLNFFDSLQPLLM 609


>ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Gossypium raimondii] gi|763800932|gb|KJB67887.1|
            hypothetical protein B456_010G216600 [Gossypium
            raimondii]
          Length = 1966

 Score =  664 bits (1713), Expect = 0.0
 Identities = 327/435 (75%), Positives = 380/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLPCEV+EILKR+   +R+KL  KGF PQ+GY++QYLPVPPNCLSVP++SDGV+VMS+D 
Sbjct: 175  LLPCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDL 234

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S +ML+KVLKQ+EIIKSSRSG+PNFE+HEVEAN+LQ AV+QYLQ+RGT K +R +DA+ G
Sbjct: 235  STSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYG 294

Query: 944  VSKEASNS-TKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
            V+K+AS+S TKAWL+KMRTLFIRKGSGFSSRSVITGD YK V+EIGIP EIA RITFEE+
Sbjct: 295  VNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEER 354

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM YLQ LVDNKLCLTY+DG STYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 355  VNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 414

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSL+AKAEV ELFS
Sbjct: 415  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFS 474

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLA DSLLSL+ +  ++   KA AQQL+MF SS+LP+PAFLK   
Sbjct: 475  VEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNH 534

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
               CWTA QILQTA PA  DCSS+RYLI  SDIL++D N+D++  VIN++  SIF+E+G 
Sbjct: 535  VAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGP 594

Query: 47   EEVLKFFNSLQPLLM 3
            +EVL FF+SLQPLLM
Sbjct: 595  KEVLNFFDSLQPLLM 609


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  664 bits (1713), Expect = 0.0
 Identities = 329/434 (75%), Positives = 380/434 (87%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LL  EV E+LKR+ E++RKKL  KG+ PQDGY+++YLPVPPNCLSVP+ISDGV+ MS+D 
Sbjct: 178  LLASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDL 237

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S+ MLKKVLKQ+EII+SSRSG+PNFE+ EVE+N+LQLAV QYL++RGT K +RD+DA+ G
Sbjct: 238  SIAMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFG 297

Query: 944  VSKEASNSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEKV 765
            VS++ +++TKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIG+P EIA RITFEE+V
Sbjct: 298  VSQDPNSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERV 357

Query: 764  SEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNRP 585
            + HN+ YLQELVDNKLCLTY DGSS+YSLREGSKGHT LR GQVVHRRIMDGD VF+NRP
Sbjct: 358  NVHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRP 417

Query: 584  PTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSV 405
            PTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSV
Sbjct: 418  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSV 477

Query: 404  EKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYSS 225
            EKQLLSSHNG LNLQLA D+LLSLK +F  YF+DKA AQQLAMFA S LP+PA  KA+ S
Sbjct: 478  EKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCS 537

Query: 224  KHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGSE 45
               WTALQILQ+ LP  FD   +RYLIK S++L  D +RD IP VIN++ TSIFFE+G E
Sbjct: 538  GPRWTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPE 597

Query: 44   EVLKFFNSLQPLLM 3
            EVL+FF+SLQPLLM
Sbjct: 598  EVLEFFDSLQPLLM 611


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  662 bits (1708), Expect = 0.0
 Identities = 326/435 (74%), Positives = 379/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLP EVMEIL+R+ ED+RKKLV KG+ PQDGY++QYLPVPPNCLSVP+ISDGV++MS+D 
Sbjct: 235  LLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDL 294

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++MLKKVLKQIE+IK SRSG PNFE+H++EAN LQ +++QYL++RGT K +R +D + G
Sbjct: 295  SVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFG 354

Query: 944  VSKEAS-NSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
             SKE + +STKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIG+P EIA RITFEE+
Sbjct: 355  SSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEER 414

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM +LQ LVD KLCLTY+DG STYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 415  VNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 474

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDC+HLFYPQSL AKAEVLELFS
Sbjct: 475  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFS 534

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLA DSLLSLK LF  YF++KAAAQQL MF S SLP+PA LK+  
Sbjct: 535  VEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPC 594

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            S  CWTALQILQTALP+ FDC  ER+ I  S IL++D NRD++  ++N++ TSIF E+G 
Sbjct: 595  SGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGP 654

Query: 47   EEVLKFFNSLQPLLM 3
             EVLKFF+SLQPLLM
Sbjct: 655  NEVLKFFDSLQPLLM 669


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
            gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  662 bits (1708), Expect = 0.0
 Identities = 326/435 (74%), Positives = 379/435 (87%), Gaps = 1/435 (0%)
 Frame = -2

Query: 1304 LLPCEVMEILKRVSEDSRKKLVAKGFAPQDGYVMQYLPVPPNCLSVPEISDGVTVMSTDP 1125
            LLP EVMEIL+R+ ED+RKKLV KG+ PQDGY++QYLPVPPNCLSVP+ISDGV++MS+D 
Sbjct: 175  LLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDL 234

Query: 1124 SMTMLKKVLKQIEIIKSSRSGSPNFEAHEVEANELQLAVDQYLQIRGTTKQTRDMDAQLG 945
            S++MLKKVLKQIE+IK SRSG PNFE+H++EAN LQ +++QYL++RGT K +R +D + G
Sbjct: 235  SVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFG 294

Query: 944  VSKEAS-NSTKAWLDKMRTLFIRKGSGFSSRSVITGDAYKGVSEIGIPCEIAHRITFEEK 768
             SKE + +STKAWL+KMRTLFIRKGSGFSSRSVITGDAYK V+EIG+P EIA RITFEE+
Sbjct: 295  SSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEER 354

Query: 767  VSEHNMTYLQELVDNKLCLTYKDGSSTYSLREGSKGHTVLRLGQVVHRRIMDGDLVFVNR 588
            V+ HNM +LQ LVD KLCLTY+DG STYSLREGSKGHT LR GQVVHRRIMDGD+VF+NR
Sbjct: 355  VNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 414

Query: 587  PPTTHKHSLQALRVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 408
            PPTTHKHSLQAL VYVHDDHTVKINPLICGPLSADFDGDC+HLFYPQSL AKAEVLELFS
Sbjct: 415  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFS 474

Query: 407  VEKQLLSSHNGILNLQLANDSLLSLKRLFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYS 228
            VEKQLLSSH+G LNLQLA DSLLSLK LF  YF++KAAAQQL MF S SLP+PA LK+  
Sbjct: 475  VEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPC 534

Query: 227  SKHCWTALQILQTALPALFDCSSERYLIKGSDILRLDLNRDIIPVVINDMATSIFFERGS 48
            S  CWTALQILQTALP+ FDC  ER+ I  S IL++D NRD++  ++N++ TSIF E+G 
Sbjct: 535  SGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGP 594

Query: 47   EEVLKFFNSLQPLLM 3
             EVLKFF+SLQPLLM
Sbjct: 595  NEVLKFFDSLQPLLM 609