BLASTX nr result

ID: Ziziphus21_contig00015895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00015895
         (484 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010098867.1| hypothetical protein L484_022634 [Morus nota...    67   4e-09
ref|XP_009602768.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_009798335.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
ref|XP_006347831.1| PREDICTED: pentatricopeptide repeat-containi...    60   8e-07
ref|XP_010037103.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06

>ref|XP_010098867.1| hypothetical protein L484_022634 [Morus notabilis]
           gi|587887154|gb|EXB75955.1| hypothetical protein
           L484_022634 [Morus notabilis]
          Length = 911

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 13/96 (13%)
 Frame = -3

Query: 251 NYVFFAASATQSLLPPKP-------------QPLFTSGSFDDPSSPEIRSGCDIHGLLDL 111
           N+VFF+AS TQSL   +P             +PLF S  F++ SS       D+ GLL L
Sbjct: 47  NHVFFSASQTQSLACLEPFSIKQQRQQQQQQKPLFDSELFENCSSLSNFVEFDVDGLLHL 106

Query: 110 LRLSARCGDVELAKAVHAFILKVEEEDIFLSNALIA 3
           L+LS R  DVELAKAVHA ++K+  ED++L N+LI+
Sbjct: 107 LQLSVRYNDVELAKAVHASVVKL-GEDVYLGNSLIS 141


>ref|XP_009602768.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800
           [Nicotiana tomentosiformis]
          Length = 890

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/65 (50%), Positives = 44/65 (67%)
 Frame = -3

Query: 197 QPLFTSGSFDDPSSPEIRSGCDIHGLLDLLRLSARCGDVELAKAVHAFILKVEEEDIFLS 18
           QPL     F D S+  + +  +     +LLR+S RCGDVELAK +H+ ILK+EEED++L 
Sbjct: 57  QPLLIPQHFKD-SNVTVAADTNRIDYANLLRISVRCGDVELAKIIHSSILKLEEEDVYLK 115

Query: 17  NALIA 3
           NALIA
Sbjct: 116 NALIA 120


>ref|XP_009798335.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800
           [Nicotiana sylvestris]
          Length = 890

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -3

Query: 116 DLLRLSARCGDVELAKAVHAFILKVEEEDIFLSNALIA 3
           +LLR+S RCGDVELAK +H+ ILK+EEED++L NALIA
Sbjct: 83  NLLRISVRCGDVELAKIIHSSILKLEEEDVYLKNALIA 120


>ref|XP_006347831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Solanum tuberosum]
          Length = 894

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = -3

Query: 197 QPLFTSGSFDDPSSPEIRSGCDIHGLLDLLRLSARCGDVELAKAVHAFILKVEEEDIFLS 18
           QPL T   F D S+  + S  +     +LLR+S RCGDV L K +H+ ++K EEED++L 
Sbjct: 60  QPLLTPQQFKD-SNVSVDSDTNCIDYANLLRISVRCGDVVLTKIIHSSLVKFEEEDVYLK 118

Query: 17  NALIA 3
           NALIA
Sbjct: 119 NALIA 123


>ref|XP_010037103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800
           [Eucalyptus grandis] gi|629082323|gb|KCW48768.1|
           hypothetical protein EUGRSUZ_K02412 [Eucalyptus grandis]
          Length = 906

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 15/92 (16%)
 Frame = -3

Query: 236 AASATQ--------SLLPPKPQP----LFTSGSFDDPSSPEIRS--GCDIHGLLDLLRLS 99
           AAS+TQ        S LPP  +P    LF S  FD P  P+  +  G       DLLR S
Sbjct: 44  AASSTQFPSPRPPPSPLPPPCRPESRRLFASEPFDGPPPPDAAAAVGSLTDDCFDLLRFS 103

Query: 98  ARCGDVELAKAVHAFILKVE-EEDIFLSNALI 6
             CGDV+LA+AVHA  L++E EE+  L NALI
Sbjct: 104 VGCGDVDLARAVHAVFLRLELEENPSLGNALI 135


Top