BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00015107
         (1710 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008221186.1| PREDICTED: tRNA pseudouridine synthase A, mi...   695   0.0  
ref|XP_007225761.1| hypothetical protein PRUPE_ppa004469mg [Prun...   669   0.0  
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   667   0.0  
ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mi...   666   0.0  
ref|XP_008350479.1| PREDICTED: tRNA pseudouridine synthase A, mi...   665   0.0  
ref|XP_014510724.1| PREDICTED: tRNA pseudouridine synthase A, mi...   661   0.0  
ref|XP_009334443.1| PREDICTED: tRNA pseudouridine synthase A, mi...   661   0.0  
gb|KOM32901.1| hypothetical protein LR48_Vigan01g245700 [Vigna a...   660   0.0  
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   659   0.0  
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   659   0.0  
gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]           657   0.0  
ref|XP_014510725.1| PREDICTED: tRNA pseudouridine synthase A, mi...   657   0.0  
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi...   656   0.0  
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   655   0.0  
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   654   0.0  
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   652   0.0  
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   644   0.0  
ref|XP_003610356.1| tRNA pseudouridine synthase A, related prote...   644   0.0  
ref|XP_003610360.1| tRNA pseudouridine synthase A, related prote...   643   0.0  
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   640   0.0  

>ref|XP_008221186.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Prunus mume]
          Length = 532

 Score =  695 bits (1793), Expect = 0.0
 Identities = 362/510 (70%), Positives = 403/510 (79%), Gaps = 11/510 (2%)
 Frame = -2

Query: 1556 MENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTC--NTKKQRYKRRKIA 1383
            MENPDT+T               PKKLKM            E T    TKKQRYKRRK+A
Sbjct: 1    MENPDTKTT-----ISPPPQEPDPKKLKMSTTTTSDDD---ETTTMDTTKKQRYKRRKVA 52

Query: 1382 IFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVS 1203
            IFFAYCGVGYQGMQKNPGAKTIEGDLEEALY S AVPEQDRN PKRYDWARSARTDKGVS
Sbjct: 53   IFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSNAVPEQDRNNPKRYDWARSARTDKGVS 112

Query: 1202 AVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFA 1023
            AVGQVVSGRFY+DPPGFVDRLNS +  QIRIFGYKRVTASFNAKKFCDRRRYVYL+P FA
Sbjct: 113  AVGQVVSGRFYVDPPGFVDRLNSNISPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFA 172

Query: 1022 LDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSN 843
            LD S+HRDRESV+ASLGSD EFVKCLECSERGRKV GL GKRNY+LRG    ++ S  SN
Sbjct: 173  LDPSAHRDRESVLASLGSDKEFVKCLECSERGRKVGGLMGKRNYELRGTSFGLDIS--SN 230

Query: 842  HSDAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTILTSNESADLD 663
             +++ ++   +EET VSP    GD+S  E K EI   + ++ +  VE   +  +E  DL+
Sbjct: 231  TNESMVESEFNEETKVSPDNAGGDDSKSEPKNEISTSSNNNGVSGVE---VEDSEDTDLN 287

Query: 662  SE-------VTLEEKKANDEGEPEKASG--FSYGKEERERFNRILKCYEGTHNFHNFTTR 510
            SE       V++ E+ AN E +PEK SG  F YG++E++RFNRIL CYEGTHNFHNFTTR
Sbjct: 288  SEPLNDTTKVSVGEENANGEEKPEKGSGSEFCYGEKEKDRFNRILNCYEGTHNFHNFTTR 347

Query: 509  TKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRHCAPE 330
            TKA DPAA R+IISF AN  VTV G++FVKCEVVGQSFMLHQIRKMIGLAVAI R+CAP+
Sbjct: 348  TKAADPAAWRYIISFNANTTVTVGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAPD 407

Query: 329  SLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEEFKMKQ 150
            SLLE ALQKDVN+NVPTAPEVGLYLDEC F+SYNQKW DSHEELSMK YEQEAE+FKMK 
Sbjct: 408  SLLEIALQKDVNVNVPTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAEDFKMKH 467

Query: 149  IYSHIASTERKEGVVGLWLHSLNHRNYPDL 60
            IY HIASTE+KEGVVGLWLHSLNHRNYPDL
Sbjct: 468  IYPHIASTEQKEGVVGLWLHSLNHRNYPDL 497


>ref|XP_007225761.1| hypothetical protein PRUPE_ppa004469mg [Prunus persica]
            gi|462422697|gb|EMJ26960.1| hypothetical protein
            PRUPE_ppa004469mg [Prunus persica]
          Length = 508

 Score =  669 bits (1725), Expect = 0.0
 Identities = 352/508 (69%), Positives = 394/508 (77%), Gaps = 9/508 (1%)
 Frame = -2

Query: 1556 MENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTKKQRYKRRKIAIF 1377
            MENPDT+T               PKKLKM          T   T  TKKQRYKRRK+AIF
Sbjct: 1    MENPDTKTT-----ISPPPQEPDPKKLKMSTTTTSDDDET-TTTDTTKKQRYKRRKVAIF 54

Query: 1376 FAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVSAV 1197
            FAYCGVGYQGMQKNPGAKTIEGDLEEALY S AVPEQDRN PKRYDWARSARTDKGVSAV
Sbjct: 55   FAYCGVGYQGMQKNPGAKTIEGDLEEALYLSNAVPEQDRNNPKRYDWARSARTDKGVSAV 114

Query: 1196 GQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFALD 1017
            GQVVSGRFY+DPPGFVDRLNS L  QIRIFGYKRVTASFNAKKFCDRR            
Sbjct: 115  GQVVSGRFYVDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRR------------ 162

Query: 1016 TSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSNHS 837
             S+HRDRESV+ASLGSD EFVKCLECSERGRKV GL GKRNY+LRG    ++ S  SN +
Sbjct: 163  -SAHRDRESVLASLGSDKEFVKCLECSERGRKVGGLMGKRNYELRGTSFGLDIS--SNTN 219

Query: 836  DAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTILTSNESADLDSE 657
            ++ ++   +EET VSP    GD+S  E K EI   + ++ +  VE   + ++E  DL+S+
Sbjct: 220  ESMVESEFNEETKVSPDNAGGDDSKSEPKNEISTSSNNNGVSGVE---VENSEDTDLNSK 276

Query: 656  -------VTLEEKKANDEGEPEKASG--FSYGKEERERFNRILKCYEGTHNFHNFTTRTK 504
                   V++ E+ AN E +PEK SG  + YG++E++RFNRIL CYEGTHNFHNFTTRTK
Sbjct: 277  PLNDTTKVSVGEENANGEEKPEKGSGSEYCYGEKEKDRFNRILNCYEGTHNFHNFTTRTK 336

Query: 503  AEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRHCAPESL 324
            A DPAARR+IISF AN  VT+ G++FVKCEVVGQSFMLHQIRKMIGLAVAI R+CAPESL
Sbjct: 337  AADPAARRYIISFNANTTVTIGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAPESL 396

Query: 323  LEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEEFKMKQIY 144
            LE ALQKDVN+NVPTAPEVGLYLDEC F+SYNQKW DSHEELSMK YEQEAE+FKMK IY
Sbjct: 397  LEIALQKDVNVNVPTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAEDFKMKHIY 456

Query: 143  SHIASTERKEGVVGLWLHSLNHRNYPDL 60
             HIASTE+KEGVVGLWLHSLNHRNYPDL
Sbjct: 457  PHIASTEQKEGVVGLWLHSLNHRNYPDL 484


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus] gi|700200317|gb|KGN55475.1| hypothetical protein
            Csa_4G652870 [Cucumis sativus]
          Length = 519

 Score =  667 bits (1721), Expect = 0.0
 Identities = 347/509 (68%), Positives = 399/509 (78%), Gaps = 7/509 (1%)
 Frame = -2

Query: 1553 ENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXT-GENTCNTKKQRYKRRKIAIF 1377
            E P TET+R              KKLKM              N+   KKQRYKRRK+AIF
Sbjct: 3    EEPPTETRRSPPQPLIEEPQP--KKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIF 60

Query: 1376 FAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVSAV 1197
            FAYCGVGYQGMQKNPGAKTIE DLEEALY +GAVPEQDR + KRYDWARSARTDKGVSAV
Sbjct: 61   FAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAV 120

Query: 1196 GQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFALD 1017
            GQVVSGRFYIDPPGFVDRLNS L  QIRIFGYKRVTASFNAKKFCDRRRYVYL+P FALD
Sbjct: 121  GQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD 180

Query: 1016 TSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSNHS 837
             + HRDRESV ASLGSDNE VKCLECSERGRKVEGL GKRN++++ A   +  S +S+++
Sbjct: 181  PNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTA---ITESDISSNT 237

Query: 836  DAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTILTSNESADL--- 666
              A++    +   V        +SN   +T ++VEN  + +  V       +ES+++   
Sbjct: 238  VNAIEVSDVQANGVLEDSATTSDSN--KQTSVLVENTATELN-VGSEGTAKSESSEMSGL 294

Query: 665  --DSEVTLEEKKANDEGEPEKASG-FSYGKEERERFNRILKCYEGTHNFHNFTTRTKAED 495
              DSE+ + ++  N +   EK+SG F YG+EE+ RFNRILK Y GTHNFHNFTTRTKAED
Sbjct: 295  GSDSEIVVSKESVNGK---EKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAED 351

Query: 494  PAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRHCAPESLLEK 315
            PAARRFI+SF+A+ +V VEGIEFVKCEVVGQSFMLHQIRKM+GLAVAIMR+CAPESL+EK
Sbjct: 352  PAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEK 411

Query: 314  ALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEEFKMKQIYSHI 135
            ALQKDVN+NVPTAPEVGLYLDECLF+SYNQKWKD+HEE+SMKAYE+ AE+FKMKQIYSHI
Sbjct: 412  ALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHI 471

Query: 134  ASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            ASTE K+G V LWLHSLNHRNYPDLRV+D
Sbjct: 472  ASTEHKDGAVALWLHSLNHRNYPDLRVID 500


>ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|659104353|ref|XP_008452912.1| PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|307136307|gb|ADN34131.1| tRNA pseudouridine
            synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  666 bits (1719), Expect = 0.0
 Identities = 345/508 (67%), Positives = 396/508 (77%), Gaps = 6/508 (1%)
 Frame = -2

Query: 1553 ENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXT-GENTCNTKKQRYKRRKIAIF 1377
            E P TET+R              KKLKM              N+   KKQRYKRRK+AIF
Sbjct: 3    EEPPTETRRSPPQPLIEEPDP--KKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIF 60

Query: 1376 FAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVSAV 1197
            FAYCGVGYQGMQKNPGAKTIE DLEEALY +GAVPEQDR + KRYDWARSARTDKGVSAV
Sbjct: 61   FAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAV 120

Query: 1196 GQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFALD 1017
            GQVVSGRFYIDPPGFVDRLNS L  QIRIFGYKRVTASFNAKKFCDRRRYVYL+P FALD
Sbjct: 121  GQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD 180

Query: 1016 TSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSNHS 837
             + HRDRESV ASLGSDNE VKCLECSERGRKVEGL GKRN++++ A   +  S +S++ 
Sbjct: 181  PNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTA---ITESDISSNI 237

Query: 836  DAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTILTSNESADL--- 666
              A++    +   V        +SN   +T ++VEN  + +    + I  S ES+++   
Sbjct: 238  VNAIEVSDVQANGVLEDSATTSDSN--KQTSVLVENTATELTVASEGIAKS-ESSEMSGL 294

Query: 665  --DSEVTLEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNFHNFTTRTKAEDP 492
              DSE+ + ++  N + +P  +  F YG+EE+ RFNRILK Y GTHNFHNFTTRTKAEDP
Sbjct: 295  GNDSEIVVSKESVNGKEKP--SGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDP 352

Query: 491  AARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRHCAPESLLEKA 312
            AARRFI+SF+A+  V VEGIEFVKCEVVGQSFMLHQIRKM+GLAVAIMR+CAPESL+EKA
Sbjct: 353  AARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKA 412

Query: 311  LQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEEFKMKQIYSHIA 132
            LQKDVN+NVPTAPEVGLYLDECLF+SYNQKWKD+HEE+SMKAYE+ AE+FKMKQIYSHIA
Sbjct: 413  LQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIA 472

Query: 131  STERKEGVVGLWLHSLNHRNYPDLRVVD 48
            STE K+G V LWLHSLNHRNYPDLRV+D
Sbjct: 473  STEHKDGAVALWLHSLNHRNYPDLRVID 500


>ref|XP_008350479.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Malus
            domestica]
          Length = 575

 Score =  665 bits (1716), Expect = 0.0
 Identities = 356/539 (66%), Positives = 394/539 (73%), Gaps = 41/539 (7%)
 Frame = -2

Query: 1553 ENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTKKQ-RYKRRKIAIF 1377
            +NPDT+  R              KKLKM                N  K  RYKRRK+AIF
Sbjct: 16   DNPDTKPTRSPPSPWPQEPDP--KKLKMSTTTTSDDEEATAAATNAAKTPRYKRRKVAIF 73

Query: 1376 FAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVSAV 1197
            FAY GVGYQGMQKNPGAKTIEGDLEEALY S AVPEQDRN PKRYDWARSARTDKGVSAV
Sbjct: 74   FAYLGVGYQGMQKNPGAKTIEGDLEEALYLSNAVPEQDRNSPKRYDWARSARTDKGVSAV 133

Query: 1196 GQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFALD 1017
            GQVVSGRFY+DPPGF+DRLNS L  QIRIFGYKRVTASFNAKKFCDRRRYVYL+P FALD
Sbjct: 134  GQVVSGRFYVDPPGFIDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD 193

Query: 1016 TSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSNHS 837
             S+HRDR SV+ASLGSD EFVKCLECSERGRKV GL GKR Y+LRG    V  S+ +N S
Sbjct: 194  PSAHRDRGSVLASLGSDQEFVKCLECSERGRKVGGLMGKRTYELRGTNFEVSISSNTNES 253

Query: 836  ---------------DAALDCRSSEETMVSPIIVNG-----------DNSNCESKTEIIV 735
                           +A  D   SE      + +N            DNSN E KTEI +
Sbjct: 254  MVESEIGEKFRVLPGNAGCDNLISETRNEVSLSINEEIKVLTENAGVDNSNSELKTEISI 313

Query: 734  ENGDSAIKQVE----DTILTSNESADLDSE------VTLEEKKANDEGEPE----KASGF 597
               ++ + ++E      +    E+ADL+SE      V+  E+KAN++   E    K +GF
Sbjct: 314  SINNNEVTEIEVENNRVVPNEAEAADLNSESLDDTNVSFGEEKANEKENTEEGSGKGNGF 373

Query: 596  SYGKEERERFNRILKCYEGTHNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKC 417
             YG++ERERFN+IL  YEGTHNFHNFTTRTKA DPAA+R+IISF AN  VTVEG+EFVKC
Sbjct: 374  CYGEKERERFNKILNSYEGTHNFHNFTTRTKAVDPAAQRYIISFNANTTVTVEGMEFVKC 433

Query: 416  EVVGQSFMLHQIRKMIGLAVAIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFS 237
            EVVGQSFMLHQIRKMIGLAVAI R CAPESLLE+ALQKDVN+NVPTAPEVGLYLDEC FS
Sbjct: 434  EVVGQSFMLHQIRKMIGLAVAIFRGCAPESLLERALQKDVNINVPTAPEVGLYLDECFFS 493

Query: 236  SYNQKWKDSHEELSMKAYEQEAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDL 60
            SYNQKW DSHEELSMK YEQEAE+FKMK IY+HIASTE KEGVVGLWLHSLNHRNYPDL
Sbjct: 494  SYNQKWGDSHEELSMKGYEQEAEDFKMKHIYTHIASTEHKEGVVGLWLHSLNHRNYPDL 552


>ref|XP_014510724.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1
            [Vigna radiata var. radiata]
          Length = 573

 Score =  661 bits (1706), Expect = 0.0
 Identities = 352/517 (68%), Positives = 391/517 (75%), Gaps = 14/517 (2%)
 Frame = -2

Query: 1556 MENPDTE--TKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTK---KQRYKRR 1392
            MENPDT   T               PKKLKM            +  C T    K+RYKRR
Sbjct: 1    MENPDTALTTSSLPPPPPLAADEPEPKKLKMSTTTSD------DEECKTAPGTKKRYKRR 54

Query: 1391 KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDK 1212
            K+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPE DR IPKRYDWARSARTDK
Sbjct: 55   KVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDK 114

Query: 1211 GVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLP 1032
            GVSAVGQVVSGRFYIDPPGFVDRLNS LPSQIRIFGYKRVT SFNAKKFCDRRRYVYL+P
Sbjct: 115  GVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIP 174

Query: 1031 TFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESST 852
             FALD S HRDRE+VMASLGS NE VKCLECSERGRKV GL G R + L    M V++  
Sbjct: 175  VFALDPSCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVDAGI 234

Query: 851  LSNHSDAALDCRSSEETMVSPIIVNGDNSNCES----KTEIIVENGDSAIKQVEDTILTS 684
             SN  D  LD   +E+  VS    + D+ N ES    K E++V++ D     +E+ I   
Sbjct: 235  SSNR-DVVLDSVVAEDVEVSLSRGDDDHLNGESGIDTKGEVLVDSTDPETG-IENVIPVQ 292

Query: 683  NESADLDSEVT-----LEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNFHNF 519
            +E   L+ E       +EE+K N   +    S F YG++ERERFN+IL  + GTHNFHNF
Sbjct: 293  DEDMPLNGESVNNSDIVEEEKMNGVDKSTGGSRFCYGEKERERFNKILNFFVGTHNFHNF 352

Query: 518  TTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRHC 339
            TTRTKA+DPAARR+IISF AN  V VEGIEFVKCEVVGQSFMLHQIRKM+GLAVAIMR+C
Sbjct: 353  TTRTKAQDPAARRYIISFNANTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNC 412

Query: 338  APESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEEFK 159
            APESL+ KALQ+DVN+NVPTAPEVGLYLDEC FSSYNQKWKDSHE +SMKAYE+EAEEFK
Sbjct: 413  APESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEVVSMKAYEKEAEEFK 472

Query: 158  MKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            MK IYSHI+STE+KEG V LWLHSLNHRNYPDL VV+
Sbjct: 473  MKYIYSHISSTEQKEGTVALWLHSLNHRNYPDLHVVN 509


>ref|XP_009334443.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Pyrus x
            bretschneideri]
          Length = 569

 Score =  661 bits (1705), Expect = 0.0
 Identities = 351/535 (65%), Positives = 392/535 (73%), Gaps = 37/535 (6%)
 Frame = -2

Query: 1553 ENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTKKQ-RYKRRKIAIF 1377
            +NPDT+  R              KKLKM              T N  K  RYKRRK++IF
Sbjct: 16   DNPDTKPTRSPPSPQPQEPDP--KKLKMSTTTTSDDEEATAATTNAAKTPRYKRRKVSIF 73

Query: 1376 FAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVSAV 1197
            FAY GVGYQGMQKNPGAKTIEGDLEEALY S +VPEQDRN PKRYDWARSARTDKGVSAV
Sbjct: 74   FAYLGVGYQGMQKNPGAKTIEGDLEEALYLSKSVPEQDRNSPKRYDWARSARTDKGVSAV 133

Query: 1196 GQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFALD 1017
            GQVVSGRFY+DPPGF+DRLNS L  QIRIFGYKRVTASFNAKKFCDRRRYVYL+P FALD
Sbjct: 134  GQVVSGRFYVDPPGFIDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD 193

Query: 1016 TSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSNHS 837
             S+HRDR SV+ASLGSD EFVKCLECSERGRKV GL GKR Y+LRG    V  S  SN +
Sbjct: 194  PSAHRDRGSVLASLGSDQEFVKCLECSERGRKVGGLMGKRTYELRGTNFEVSIS--SNTN 251

Query: 836  DAALDCRSSEETMVSPIIVNGDN----------------------SNCESKTEIIVENGD 723
            ++ ++    E+  V P    GDN                      SN E K EI +    
Sbjct: 252  ESMVESEIGEKFRVLPGNAGGDNLISQPRNEVSLSVLTQNAGVDNSNSELKAEISISINK 311

Query: 722  SAIKQVE----DTILTSNESADLDSE------VTLEEKKANDEGEPE----KASGFSYGK 585
            + + ++E      +    E+ADL+SE       +  E+KAN+E + E    K +GF YG+
Sbjct: 312  NEVSEIEVENNRVVPNEAETADLNSESLNDTNFSFGEEKANEEEKTEEGSGKGNGFCYGE 371

Query: 584  EERERFNRILKCYEGTHNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVG 405
            +ERERFN+IL  YEGTHNFHNFTTRTKA DPAA+R+IISF AN  VTVE +EF+KCEVVG
Sbjct: 372  KERERFNKILNSYEGTHNFHNFTTRTKAVDPAAQRYIISFNANATVTVEAMEFIKCEVVG 431

Query: 404  QSFMLHQIRKMIGLAVAIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQ 225
            QSFMLHQIRKMIGLAVAI R CAPESLLE+ALQKDVN+NVPTAPEVGLYLDEC FSSYNQ
Sbjct: 432  QSFMLHQIRKMIGLAVAIFRGCAPESLLERALQKDVNINVPTAPEVGLYLDECFFSSYNQ 491

Query: 224  KWKDSHEELSMKAYEQEAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDL 60
            KW DSHEELSMK YEQEAE+FKMK IY+HIASTE KEGVVGLWLHSLNHRNYPDL
Sbjct: 492  KWGDSHEELSMKGYEQEAEDFKMKHIYTHIASTEHKEGVVGLWLHSLNHRNYPDL 546


>gb|KOM32901.1| hypothetical protein LR48_Vigan01g245700 [Vigna angularis]
          Length = 611

 Score =  660 bits (1702), Expect = 0.0
 Identities = 350/524 (66%), Positives = 395/524 (75%), Gaps = 16/524 (3%)
 Frame = -2

Query: 1556 MENPDTE--TKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTK---KQRYKRR 1392
            MENPDT   T               PKKLKM            +  C T    K+RYKRR
Sbjct: 1    MENPDTALTTSSLPPPPPLAADEPEPKKLKMSTTTSD------DEECKTAPGTKKRYKRR 54

Query: 1391 KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDK 1212
            K+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPE DR IPKRYDWARSARTDK
Sbjct: 55   KVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDK 114

Query: 1211 GVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLP 1032
            GVSAVGQVVSGRFYIDPPG VDRLNS LPSQIRIFGYKRVT SF+AKKFCDRRRYVYL+P
Sbjct: 115  GVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTGSFSAKKFCDRRRYVYLIP 174

Query: 1031 TFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESST 852
             FALD S HRDRE+VMASLGS NE VKCLECSERGRKV GL G R + L    M V++ +
Sbjct: 175  VFALDPSCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVDAGS 234

Query: 851  LSNHSDAALDCRSSEETMVSPIIVNGDN------SNCESKTEIIVENGDSAIKQVEDTIL 690
               + D  LD   +E+  VS  +  GD+      S  ++K E++V+ G +    +E+ I 
Sbjct: 235  ---NRDVVLDSVVAEDVEVS--LSKGDDNHLNGESGIDTKGEVLVD-GTNPETGIENMIT 288

Query: 689  TSNESADLDSEVT-----LEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNFH 525
              +E   L+ E       +EE+K N   +    S F YG++ERERFN++L  + GTHNFH
Sbjct: 289  VQDEDMPLNGESVNNSDIIEEEKMNGVDKSTGGSRFCYGEKERERFNKVLNFFVGTHNFH 348

Query: 524  NFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR 345
            NFTTRTKA+DPAARR+IISF AN  V VEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR
Sbjct: 349  NFTTRTKAQDPAARRYIISFNANTTVVVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR 408

Query: 344  HCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEE 165
            +CAPESL+ KALQ+DVN+NVPTAPEVGLYLDEC FSSYNQKWKDSHEE+SMKAYE+EAEE
Sbjct: 409  NCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEEVSMKAYEKEAEE 468

Query: 164  FKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVDGASPT 33
            FKMK IYSHI+STE+KEG V LWLHSLNHRNYPDLRVV+  + T
Sbjct: 469  FKMKYIYSHISSTEQKEGTVALWLHSLNHRNYPDLRVVNEEATT 512


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  659 bits (1701), Expect = 0.0
 Identities = 334/460 (72%), Positives = 374/460 (81%), Gaps = 5/460 (1%)
 Frame = -2

Query: 1412 KQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWA 1233
            K+RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPEQDR +PKRYDWA
Sbjct: 14   KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 73

Query: 1232 RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRR 1053
            RSARTDKGVSAVGQVVSGRFYIDPPG VDRLNS LPSQIRIFGYKRVTASFNAKKFCDRR
Sbjct: 74   RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRR 133

Query: 1052 RYVYLLPTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAG 873
            RYVYL+P FALD S HRDRE+VMASLGS NE VKCLECSERGRKV GL G R   L    
Sbjct: 134  RYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEA 193

Query: 872  MSVESSTLSNHSDAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTI 693
            + VE+   SN      D   +E+  VS  +  GD+++   ++    + G +    +E  I
Sbjct: 194  VDVEAGISSNR-----DSGVTEDVEVS--LSKGDDNHLNEESGNDNKGGMNCKTGLETVI 246

Query: 692  LTSNESADLDSEVT-----LEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNF 528
                E   L+ E       LEE+K N E +P   S F YG++ERERFN+ILKC+ GTHNF
Sbjct: 247  PVQEEGTPLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNF 306

Query: 527  HNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIM 348
            HNFTTRTKAEDPAARR+IISF AN  + VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIM
Sbjct: 307  HNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIM 366

Query: 347  RHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAE 168
            R+CAPESL+++ALQ+DVN+NVPTAPEVGLYLDEC F+SYNQKWKD HEELSMKAYE+EA+
Sbjct: 367  RNCAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEAD 425

Query: 167  EFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            EFKMK IYSHIASTE+KEG V LWLHSLNHRNYPDLRV++
Sbjct: 426  EFKMKYIYSHIASTEQKEGTVALWLHSLNHRNYPDLRVIN 465


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max] gi|947124071|gb|KRH72277.1| hypothetical
            protein GLYMA_02G202300 [Glycine max]
          Length = 548

 Score =  659 bits (1701), Expect = 0.0
 Identities = 334/460 (72%), Positives = 374/460 (81%), Gaps = 5/460 (1%)
 Frame = -2

Query: 1412 KQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWA 1233
            K+RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPEQDR +PKRYDWA
Sbjct: 44   KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 103

Query: 1232 RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRR 1053
            RSARTDKGVSAVGQVVSGRFYIDPPG VDRLNS LPSQIRIFGYKRVTASFNAKKFCDRR
Sbjct: 104  RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRR 163

Query: 1052 RYVYLLPTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAG 873
            RYVYL+P FALD S HRDRE+VMASLGS NE VKCLECSERGRKV GL G R   L    
Sbjct: 164  RYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEA 223

Query: 872  MSVESSTLSNHSDAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTI 693
            + VE+   SN      D   +E+  VS  +  GD+++   ++    + G +    +E  I
Sbjct: 224  VDVEAGISSNR-----DSGVTEDVEVS--LSKGDDNHLNEESGNDNKGGMNCKTGLETVI 276

Query: 692  LTSNESADLDSEVT-----LEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNF 528
                E   L+ E       LEE+K N E +P   S F YG++ERERFN+ILKC+ GTHNF
Sbjct: 277  PVQEEGTPLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNF 336

Query: 527  HNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIM 348
            HNFTTRTKAEDPAARR+IISF AN  + VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIM
Sbjct: 337  HNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIM 396

Query: 347  RHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAE 168
            R+CAPESL+++ALQ+DVN+NVPTAPEVGLYLDEC F+SYNQKWKD HEELSMKAYE+EA+
Sbjct: 397  RNCAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEAD 455

Query: 167  EFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            EFKMK IYSHIASTE+KEG V LWLHSLNHRNYPDLRV++
Sbjct: 456  EFKMKYIYSHIASTEQKEGTVALWLHSLNHRNYPDLRVIN 495


>gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]
          Length = 552

 Score =  657 bits (1696), Expect = 0.0
 Identities = 333/460 (72%), Positives = 373/460 (81%), Gaps = 5/460 (1%)
 Frame = -2

Query: 1412 KQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWA 1233
            K+RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPEQDR +PKRYDWA
Sbjct: 48   KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 107

Query: 1232 RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRR 1053
            RSARTDKGVSAVGQVVSGRFYIDPPG VDRLNS LPSQIRIFGYKRVTASFNAKKFCDRR
Sbjct: 108  RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRR 167

Query: 1052 RYVYLLPTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAG 873
            RYVYL+P FALD S HRDRE+VMASLGS NE VKCLECSERGRKV GL G R   L    
Sbjct: 168  RYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEA 227

Query: 872  MSVESSTLSNHSDAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTI 693
            + VE+   SN      D   +E+  VS  +  GD+++   ++    + G +    +E  I
Sbjct: 228  VDVEAGISSNR-----DSGVTEDVEVS--LSKGDDNHLNEESGNDNKGGMNCKTGLETVI 280

Query: 692  LTSNESADLDSEVT-----LEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNF 528
                E   L+ E       LEE+K N E +P   S F YG++ERERFN+ILKC+ GTHNF
Sbjct: 281  PVQEEGTPLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNF 340

Query: 527  HNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIM 348
            HNFTTRTKAEDPAARR+IISF AN  + VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIM
Sbjct: 341  HNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIM 400

Query: 347  RHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAE 168
            R+CAPESL+++ALQ+DVN+NVPTAPEVGLYLDEC F+SYNQKWKD HEELSMKAYE+EA+
Sbjct: 401  RNCAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEAD 459

Query: 167  EFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            EFKMK IYSHIASTE+KEG V LWLHSLNHRNYPDL V++
Sbjct: 460  EFKMKYIYSHIASTEQKEGTVALWLHSLNHRNYPDLHVIN 499


>ref|XP_014510725.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2
            [Vigna radiata var. radiata]
          Length = 543

 Score =  657 bits (1695), Expect = 0.0
 Identities = 337/464 (72%), Positives = 375/464 (80%), Gaps = 9/464 (1%)
 Frame = -2

Query: 1412 KQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWA 1233
            K+RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPE DR IPKRYDWA
Sbjct: 18   KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWA 77

Query: 1232 RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRR 1053
            RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNS LPSQIRIFGYKRVT SFNAKKFCDRR
Sbjct: 78   RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTGSFNAKKFCDRR 137

Query: 1052 RYVYLLPTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAG 873
            RYVYL+P FALD S HRDRE+VMASLGS NE VKCLECSERGRKV GL G R + L    
Sbjct: 138  RYVYLIPVFALDPSCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEA 197

Query: 872  MSVESSTLSNHSDAALDCRSSEETMVSPIIVNGDNSNCES----KTEIIVENGDSAIKQV 705
            M V++   SN  D  LD   +E+  VS    + D+ N ES    K E++V++ D     +
Sbjct: 198  MDVDAGISSNR-DVVLDSVVAEDVEVSLSRGDDDHLNGESGIDTKGEVLVDSTDPETG-I 255

Query: 704  EDTILTSNESADLDSEVT-----LEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEG 540
            E+ I   +E   L+ E       +EE+K N   +    S F YG++ERERFN+IL  + G
Sbjct: 256  ENVIPVQDEDMPLNGESVNNSDIVEEEKMNGVDKSTGGSRFCYGEKERERFNKILNFFVG 315

Query: 539  THNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLA 360
            THNFHNFTTRTKA+DPAARR+IISF AN  V VEGIEFVKCEVVGQSFMLHQIRKM+GLA
Sbjct: 316  THNFHNFTTRTKAQDPAARRYIISFNANTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLA 375

Query: 359  VAIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYE 180
            VAIMR+CAPESL+ KALQ+DVN+NVPTAPEVGLYLDEC FSSYNQKWKDSHE +SMKAYE
Sbjct: 376  VAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEVVSMKAYE 435

Query: 179  QEAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            +EAEEFKMK IYSHI+STE+KEG V LWLHSLNHRNYPDL VV+
Sbjct: 436  KEAEEFKMKYIYSHISSTEQKEGTVALWLHSLNHRNYPDLHVVN 479


>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  656 bits (1693), Expect = 0.0
 Identities = 346/502 (68%), Positives = 374/502 (74%), Gaps = 3/502 (0%)
 Frame = -2

Query: 1556 MENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTKKQRYKRRKIAIF 1377
            MENPDT                 PKKLKM            +    T+KQR KRRK+AIF
Sbjct: 1    MENPDTTKPTRSPPPPPPQQQPDPKKLKMSTTTTDDE----QTAATTQKQRLKRRKVAIF 56

Query: 1376 FAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVSAV 1197
            FAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPEQDR+ PKRYDWARSARTDKGVSAV
Sbjct: 57   FAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVSAV 116

Query: 1196 GQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFALD 1017
            GQVVSGRFY+DPPGFVDRLNS L  QIRIFGYKRVTASFNAKKFCDRRRYVYL+P FALD
Sbjct: 117  GQVVSGRFYVDPPGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD 176

Query: 1016 TSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSNHS 837
             S+HRDRESV ASLGSD EFVKCLECS+RGRKV GL GKR YQLRG              
Sbjct: 177  PSAHRDRESVKASLGSDEEFVKCLECSDRGRKVGGLMGKRTYQLRG-------------- 222

Query: 836  DAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIK---QVEDTILTSNESADL 666
                                G++ N ES TEI   N D  I    + ED ++  N   + 
Sbjct: 223  --------------------GNSYNSESVTEIST-NDDMKIDNDIEGEDNVVVGNADMNS 261

Query: 665  DSEVTLEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNFHNFTTRTKAEDPAA 486
              EV   EKKA       + SGF YG++E+ERFNRIL CY+GTHNFHNFTTRTKAEDPAA
Sbjct: 262  AEEVNGGEKKA------VEGSGFCYGEKEKERFNRILSCYQGTHNFHNFTTRTKAEDPAA 315

Query: 485  RRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRHCAPESLLEKALQ 306
             R+IISF AN  VTVEGIEFVKCEVVGQSFMLHQIRK+IGLAVAIMR+CAPESLLE+ALQ
Sbjct: 316  IRYIISFSANATVTVEGIEFVKCEVVGQSFMLHQIRKLIGLAVAIMRNCAPESLLERALQ 375

Query: 305  KDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEEFKMKQIYSHIAST 126
            KDVN+NVPTAPEVGLYLDEC FSSYNQKW D+HEE+SMK YE EAE FKMK IY+HI +T
Sbjct: 376  KDVNVNVPTAPEVGLYLDECFFSSYNQKWGDTHEEVSMKGYEAEAEAFKMKHIYTHIGAT 435

Query: 125  ERKEGVVGLWLHSLNHRNYPDL 60
            E KEGVVGLWLHSLNHRNYPDL
Sbjct: 436  EHKEGVVGLWLHSLNHRNYPDL 457


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  655 bits (1691), Expect = 0.0
 Identities = 349/519 (67%), Positives = 396/519 (76%), Gaps = 16/519 (3%)
 Frame = -2

Query: 1556 MENPDTE--TKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTK---KQRYKRR 1392
            MEN DT   T               PKKLKM            +  C T    K+RYKRR
Sbjct: 1    MENSDTALTTSSLPPPPPLAAEEPEPKKLKMSTTSD-------DEECTTAPGAKKRYKRR 53

Query: 1391 KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDK 1212
            KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPE DR IPKRYDWARSARTDK
Sbjct: 54   KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDK 113

Query: 1211 GVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLP 1032
            GVSAVGQVVSGRFYIDPPG VDRLNS L SQIRIFGYKRVT SFNAKKFCDRRRYVYL+P
Sbjct: 114  GVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIP 173

Query: 1031 TFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESST 852
             FALD   HRDRE+VMASLGS NE VKCLECSERGRKV GL G R + L    M VE+  
Sbjct: 174  VFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAG- 232

Query: 851  LSNHSDAALDCRSSEETMVSPIIVNGDN------SNCESKTEIIVE--NGDSAIKQ---V 705
            +S+++D  LD   + +   S  +  GD+      S  ++K +++V+  N  + I++   V
Sbjct: 233  ISSNTDVVLDSVVTGDVEAS--LSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPV 290

Query: 704  EDTILTSNESADLDSEVTLEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNFH 525
            +D ++  N  +  +S++ +EE+K N E +    S F YG++ERERFN+IL C+ GTHNFH
Sbjct: 291  QDEVMPLNGESVNNSDI-IEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFH 349

Query: 524  NFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR 345
            NFTTRTKAEDPAARR+IISF AN    VEGIEFVKCEVVGQSFMLHQIRKM+GLAVAIMR
Sbjct: 350  NFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMR 409

Query: 344  HCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEE 165
            +CAPESL+ KALQ+DVN+NVPTAPEVGLYLDEC FSSYNQKWKDSHEELSMKAYE+EAEE
Sbjct: 410  NCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEE 469

Query: 164  FKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            FKMK IYSHI+ TE+KEG V LWLHSLNHRNYPDLRVV+
Sbjct: 470  FKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVN 508


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  654 bits (1688), Expect = 0.0
 Identities = 335/466 (71%), Positives = 381/466 (81%), Gaps = 11/466 (2%)
 Frame = -2

Query: 1412 KQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWA 1233
            K+RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPE DR IPKRYDWA
Sbjct: 17   KKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWA 76

Query: 1232 RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRR 1053
            RSARTDKGVSAVGQVVSGRFYIDPPG VDRLNS L SQIRIFGYKRVT SFNAKKFCDRR
Sbjct: 77   RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRR 136

Query: 1052 RYVYLLPTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAG 873
            RYVYL+P FALD   HRDRE+VMASLGS NE VKCLECSERGRKV GL G R + L    
Sbjct: 137  RYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEA 196

Query: 872  MSVESSTLSNHSDAALDCRSSEETMVSPIIVNGDN------SNCESKTEIIVE--NGDSA 717
            M VE+  +S+++D  LD   + +   S  +  GD+      S  ++K +++V+  N  + 
Sbjct: 197  MDVEAG-ISSNTDVVLDSVVTGDVEAS--LSKGDDNHLNGESGIDNKGKVLVDGTNLKTG 253

Query: 716  IKQ---VEDTILTSNESADLDSEVTLEEKKANDEGEPEKASGFSYGKEERERFNRILKCY 546
            I++   V+D ++  N  +  +S++ +EE+K N E +    S F YG++ERERFN+IL C+
Sbjct: 254  IEKGIPVQDEVMPLNGESVNNSDI-IEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCF 312

Query: 545  EGTHNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIG 366
             GTHNFHNFTTRTKAEDPAARR+IISF AN    VEGIEFVKCEVVGQSFMLHQIRKM+G
Sbjct: 313  VGTHNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMG 372

Query: 365  LAVAIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKA 186
            LAVAIMR+CAPESL+ KALQ+DVN+NVPTAPEVGLYLDEC FSSYNQKWKDSHEELSMKA
Sbjct: 373  LAVAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKA 432

Query: 185  YEQEAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVD 48
            YE+EAEEFKMK IYSHI+ TE+KEG V LWLHSLNHRNYPDLRVV+
Sbjct: 433  YEKEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVN 478


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  652 bits (1683), Expect = 0.0
 Identities = 343/520 (65%), Positives = 402/520 (77%), Gaps = 20/520 (3%)
 Frame = -2

Query: 1556 MENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXT------GENTCNTKKQRYKR 1395
            MEN +T T++             PK+LKM                 G ++  TK+Q  KR
Sbjct: 1    MENAETNTEKLPSPSLSPRQEPDPKRLKMSATSTSDDERDLIPAAAGADS-TTKRQLCKR 59

Query: 1394 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTD 1215
            RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAV E+DR  P+RYDWARSARTD
Sbjct: 60   RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTD 119

Query: 1214 KGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLL 1035
            KGVSAVGQVVSGRF IDPPG V+RLNS LP+QIRIFGYKRVTASFNAKKFCD+RRYVYLL
Sbjct: 120  KGVSAVGQVVSGRFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLL 179

Query: 1034 PTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESS 855
            P FALD+SSHRDRESVMASLGS NE VKCLECSERGRKV G+ GKR YQL G   + E++
Sbjct: 180  PVFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQL-GLPSNDENA 238

Query: 854  TLSNH--------------SDAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSA 717
            +L++                +  L+   S +T+   ++V  +N+N ES  E +VE+  S 
Sbjct: 239  SLNSQVKVDTVVSTCNGDRHNTNLESVESNKTISESVMV--ENANSESVNETLVESRTSE 296

Query: 716  IKQVEDTILTSNESADLDSEVTLEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGT 537
              Q E+T L+ +  +  DS+V  EE+  N E +  K SGF YG+EE++RFNRILK Y G+
Sbjct: 297  TVQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGS 356

Query: 536  HNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAV 357
            HNFHNFTTRTKAEDP+ARR+IISF A+ VV VEGI+F+KCEVVGQSFMLHQIRKMIGLAV
Sbjct: 357  HNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAV 416

Query: 356  AIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQ 177
            A++R+CAPESL+E ALQKDVN+NVPTAPEVGLYLDEC+F+SYN+KWKDSHEELSMKAYE+
Sbjct: 417  AVVRNCAPESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEE 476

Query: 176  EAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLR 57
            EAE FKMK I+SHIA TE+KEGVV LWLHSLN+RNYPDLR
Sbjct: 477  EAENFKMKHIFSHIARTEQKEGVVALWLHSLNYRNYPDLR 516


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
            sinensis]
          Length = 526

 Score =  644 bits (1661), Expect = 0.0
 Identities = 342/527 (64%), Positives = 395/527 (74%), Gaps = 28/527 (5%)
 Frame = -2

Query: 1556 MENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXT------GENTCNTKKQRYKR 1395
            MEN +T T++             PK+LKM                 G ++  TK+Q  KR
Sbjct: 1    MENAETNTEKLPSPSLSPRQEPDPKRLKMSATTTSDDERDLIPAAAGADS-TTKRQLCKR 59

Query: 1394 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTD 1215
            RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAV E+DR  P+RYDWARSARTD
Sbjct: 60   RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTD 119

Query: 1214 KGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLL 1035
            KGVSAVGQVVSGRF IDPPG V+RLN  LP+QIRIFGYKRVTASFNAKKFCD+RRYVYLL
Sbjct: 120  KGVSAVGQVVSGRFCIDPPGLVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLL 179

Query: 1034 PTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESS 855
            P FALD+SSHRDRESVMASLGS NE VKCLECSERGRKV G+ GKR YQL          
Sbjct: 180  PVFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQL---------G 230

Query: 854  TLSNHSDAALDCRSSEETMVSPIIVNGD----------------------NSNCESKTEI 741
              SN  +A+L+ +   +T+VS    NGD                      N+N ES  E 
Sbjct: 231  LPSNDENASLNSQVKVDTVVSTC--NGDRHNTNLESVESNKTISESAMVENANSESVNET 288

Query: 740  IVENGDSAIKQVEDTILTSNESADLDSEVTLEEKKANDEGEPEKASGFSYGKEERERFNR 561
            +VE+  S   Q E+T L+ +  +  DS+V  EE+  N E +  K SGF YG+EE++RFNR
Sbjct: 289  LVESRTSETVQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNR 348

Query: 560  ILKCYEGTHNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQI 381
            ILK Y G+HNFHNFTTRTKAEDP+ARR+IISF A+ VV VEGI+F+KCEVVGQSFMLHQI
Sbjct: 349  ILKHYVGSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQI 408

Query: 380  RKMIGLAVAIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEE 201
            RKMIGLAVA++R+CAP+SL+E ALQKDVN+NVPTAPEVGLYLDEC+F+SYN+KWKDSHEE
Sbjct: 409  RKMIGLAVAVVRNCAPQSLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEE 468

Query: 200  LSMKAYEQEAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDL 60
            LSMKAYE+EAE FKMK I+SHI  TE+KEGVV LWLHSLN+RNYPDL
Sbjct: 469  LSMKAYEEEAENFKMKHIFSHITRTEQKEGVVALWLHSLNYRNYPDL 515


>ref|XP_003610356.1| tRNA pseudouridine synthase A, related protein [Medicago truncatula]
            gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
            A, related protein [Medicago truncatula]
          Length = 530

 Score =  644 bits (1661), Expect = 0.0
 Identities = 326/475 (68%), Positives = 379/475 (79%), Gaps = 7/475 (1%)
 Frame = -2

Query: 1436 GENTCNTKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRN 1257
            G  T    K RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY SGAVPEQDR 
Sbjct: 40   GCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRG 99

Query: 1256 IPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFN 1077
            + KRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNS LPSQIRIFG+KRVTASF+
Sbjct: 100  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFS 159

Query: 1076 AKKFCDRRRYVYLLPTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKR 897
            AKKFCDRRRYVYL+P FALD   HRDRE+V+ASLGS+NE VKCL CSERGRKVEG+ G  
Sbjct: 160  AKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNS 219

Query: 896  NYQLRGAGMSVESSTLSNHSDAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSA 717
               L    + VE+ + SN +D  +D   +++  VS  +  GD+++  +K  I    G  +
Sbjct: 220  KRNLELEAVDVENGS-SNKNDV-VDSGVTKDVEVS--LSKGDDNHL-NKESINDNEGKVS 274

Query: 716  IKQVEDTILTSNES-------ADLDSEVTLEEKKANDEGEPEKASGFSYGKEERERFNRI 558
            +++V    + S+E           ++   LEE+K N E      SGF YG++ERERFN I
Sbjct: 275  VEEVNSKTVVSDEDEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNI 334

Query: 557  LKCYEGTHNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIR 378
            LKCY GTHNFHNFTTR K EDP+A+RFIISF+A+  V VEG+EFVKCE+VGQSFMLHQIR
Sbjct: 335  LKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIR 394

Query: 377  KMIGLAVAIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEEL 198
            KM+GLAVAIMR+CAPESL+EKALQKDV++ VPTAPEVGLYLDEC F+SYNQKWKD+HEE+
Sbjct: 395  KMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEV 454

Query: 197  SMKAYEQEAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVDGASPT 33
            SMKAYE+EAE+FKM+ IY HIASTE KEG VGLWLHSLNHRNYPDLR++DG   T
Sbjct: 455  SMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVT 509


>ref|XP_003610360.1| tRNA pseudouridine synthase A, related protein [Medicago truncatula]
            gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
            A, related protein [Medicago truncatula]
            gi|388510220|gb|AFK43176.1| unknown [Medicago truncatula]
          Length = 530

 Score =  643 bits (1658), Expect = 0.0
 Identities = 325/475 (68%), Positives = 379/475 (79%), Gaps = 7/475 (1%)
 Frame = -2

Query: 1436 GENTCNTKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRN 1257
            G  T    K RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY SGAVPEQDR 
Sbjct: 40   GCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRG 99

Query: 1256 IPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFN 1077
            + KRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNS LPSQIRIFG+KRVTASF+
Sbjct: 100  LSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFS 159

Query: 1076 AKKFCDRRRYVYLLPTFALDTSSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKR 897
            AKKFCDRRRYVYL+P FALD   HRDRE+V+ASLGS+NE VKCL CSERGRKVEG+ G  
Sbjct: 160  AKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNS 219

Query: 896  NYQLRGAGMSVESSTLSNHSDAALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSA 717
               L    + VE+ + SN +D  +D   +++  VS  +  GD+++  +K  I    G  +
Sbjct: 220  KRNLELEAVDVENGS-SNKNDV-VDSGVTKDVEVS--LSKGDDNHL-NKESINDNEGKVS 274

Query: 716  IKQVEDTILTSNES-------ADLDSEVTLEEKKANDEGEPEKASGFSYGKEERERFNRI 558
            +++V    + S++           ++   LEE+K N E      SGF YG++ERERFN I
Sbjct: 275  VEEVNSKTVVSDQDEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNI 334

Query: 557  LKCYEGTHNFHNFTTRTKAEDPAARRFIISFEANKVVTVEGIEFVKCEVVGQSFMLHQIR 378
            LKCY GTHNFHNFTTR K EDP+A+RFIISF+A+  V VEG+EFVKCE+VGQSFMLHQIR
Sbjct: 335  LKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIR 394

Query: 377  KMIGLAVAIMRHCAPESLLEKALQKDVNMNVPTAPEVGLYLDECLFSSYNQKWKDSHEEL 198
            KM+GLAVAIMR+CAPESL+EKALQKDV++ VPTAPEVGLYLDEC F+SYNQKWKD+HEE+
Sbjct: 395  KMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEV 454

Query: 197  SMKAYEQEAEEFKMKQIYSHIASTERKEGVVGLWLHSLNHRNYPDLRVVDGASPT 33
            SMKAYE+EAE+FKM+ IY HIASTE KEG VGLWLHSLNHRNYPDLR++DG   T
Sbjct: 455  SMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVT 509


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  640 bits (1652), Expect = 0.0
 Identities = 336/499 (67%), Positives = 379/499 (75%)
 Frame = -2

Query: 1553 ENPDTETKRXXXXXXXXXXXXXPKKLKMXXXXXXXXXXTGENTCNTKKQRYKRRKIAIFF 1374
            + PDT+  +             PK+LKM          T   T  TKKQRYKRRKIAIFF
Sbjct: 5    DTPDTKIAKPPPPPPPTTQEPDPKRLKMSTTTTSDDEETASATNGTKKQRYKRRKIAIFF 64

Query: 1373 AYCGVGYQGMQKNPGAKTIEGDLEEALYQSGAVPEQDRNIPKRYDWARSARTDKGVSAVG 1194
            AYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAVPEQDR  PKRYDWARSARTDKGVSAVG
Sbjct: 65   AYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAVG 124

Query: 1193 QVVSGRFYIDPPGFVDRLNSKLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLLPTFALDT 1014
            QVVSGRFYIDPPG V+RLN  LP+QIRIFGYKRVTASFN+KKFCDRRRYVYL+P FALD 
Sbjct: 125  QVVSGRFYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDP 184

Query: 1013 SSHRDRESVMASLGSDNEFVKCLECSERGRKVEGLFGKRNYQLRGAGMSVESSTLSNHSD 834
            S HRDRESV+ASLGS NE VKCLECSERGRKV G+ GKR++         E+ +   HSD
Sbjct: 185  SCHRDRESVLASLGSGNELVKCLECSERGRKVAGVMGKRSF---------EAKSTIVHSD 235

Query: 833  AALDCRSSEETMVSPIIVNGDNSNCESKTEIIVENGDSAIKQVEDTILTSNESADLDSEV 654
             +                   ++N ES   I   N  S +++V D+ +  NE  ++D   
Sbjct: 236  VS-------------------SNNGESGNVIKEHNLTSELEEVTDSSV-QNEFTEVD--- 272

Query: 653  TLEEKKANDEGEPEKASGFSYGKEERERFNRILKCYEGTHNFHNFTTRTKAEDPAARRFI 474
                 K N E  P +   F YG+EE+  FNRILK Y G+HNFHNFTTRTKAEDP+ARR+I
Sbjct: 273  -----KVNVEKIPLEERRFCYGEEEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYI 327

Query: 473  ISFEANKVVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRHCAPESLLEKALQKDVN 294
            +SF AN VV VEGI+FVKCEVVGQSFMLHQIRKMIG+AVA+MR+CAPESL+E AL+KDV+
Sbjct: 328  VSFHANTVVNVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVS 387

Query: 293  MNVPTAPEVGLYLDECLFSSYNQKWKDSHEELSMKAYEQEAEEFKMKQIYSHIASTERKE 114
            +NVPTAPEVGLYLDECLF+SYNQKWKDSHEELSMKAYE+EAEEFKMK IYSHIASTER+E
Sbjct: 388  INVPTAPEVGLYLDECLFASYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREE 447

Query: 113  GVVGLWLHSLNHRNYPDLR 57
            GVV LWLHSLNHRNYPDLR
Sbjct: 448  GVVALWLHSLNHRNYPDLR 466