BLASTX nr result
ID: Ziziphus21_contig00014065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00014065
(921 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa s... 384 e-104
ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volv... 370 e-100
ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding pro... 370 e-100
ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvo... 369 2e-99
ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvo... 368 3e-99
ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa s... 366 1e-98
ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvo... 366 1e-98
gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.... 362 2e-97
gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.... 361 4e-97
ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII typ... 360 6e-97
sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding prot... 360 8e-97
ref|XP_001693987.1| light-harvesting protein of photosystem II [... 358 4e-96
ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa s... 358 4e-96
ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volv... 358 4e-96
gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein ... 357 7e-96
ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Ch... 356 1e-95
gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein ... 355 4e-95
sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding prot... 352 2e-94
ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvo... 350 7e-94
ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvo... 350 7e-94
>ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 384 bits (985), Expect = e-104
Identities = 188/244 (77%), Positives = 209/244 (85%), Gaps = 2/244 (0%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGL 643
S RR S+PK +G +QVTRA++EWYGPDR KFLGP+S+ +TPSYL+GE+PGDYGWDTAGL
Sbjct: 13 SARRTVSSPKSKG-KQVTRASIEWYGPDRPKFLGPYSDGATPSYLKGEYPGDYGWDTAGL 71
Query: 642 SADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGL 463
SADPETFSRYREIEVIH+RWALLG LGI+TPELL KY G+KFQEA WFKAGAQIF DGL
Sbjct: 72 SADPETFSRYREIEVIHSRWALLGTLGIVTPELLEKYGGVKFQEAVWFKAGAQIFSADGL 131
Query: 462 NYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDP 289
NYLGNPSLVHAQSII T+A QV+++GLAE YR NGGPAG+ LYPGG FDPLGLADDP
Sbjct: 132 NYLGNPSLVHAQSIIATVATQVILLGLAEGYRVNGGPAGEITDPLYPGGAFDPLGLADDP 191
Query: 288 VTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKF 109
TFAELKVKEIKNGRLA FA GFFVQAIVTGKGPI NL DHLADPF NGF ++ A KF
Sbjct: 192 DTFAELKVKEIKNGRLAQFAALGFFVQAIVTGKGPIQNLEDHLADPFAVNGF-TIGAQKF 250
Query: 108 DPAS 97
P +
Sbjct: 251 VPGN 254
>ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis] gi|300263246|gb|EFJ47448.1| hypothetical
protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 370 bits (951), Expect = e-100
Identities = 187/244 (76%), Positives = 206/244 (84%), Gaps = 2/244 (0%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGL 643
SVR AT++ + R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGL
Sbjct: 12 SVRPATASSRAA--RVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGL 69
Query: 642 SADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGL 463
SADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF GL
Sbjct: 70 SADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGL 129
Query: 462 NYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDP 289
NYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP
Sbjct: 130 NYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDP 189
Query: 288 VTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKF 109
TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI+NL+DHLA+P N FA ATKF
Sbjct: 190 DTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFA--YATKF 247
Query: 108 DPAS 97
P++
Sbjct: 248 TPSA 251
>ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis] gi|300262048|gb|EFJ46257.1|
light-harvesting chlorophyll a/b-binding protein [Volvox
carteri f. nagariensis]
Length = 251
Score = 370 bits (951), Expect = e-100
Identities = 188/244 (77%), Positives = 205/244 (84%), Gaps = 2/244 (0%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGL 643
SVR AT A + R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGL
Sbjct: 12 SVRPATVASRAA--RVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGL 69
Query: 642 SADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGL 463
SADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF GL
Sbjct: 70 SADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGL 129
Query: 462 NYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDP 289
NYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP
Sbjct: 130 NYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDP 189
Query: 288 VTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKF 109
TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI+NL+DHLA+P N FA ATKF
Sbjct: 190 DTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFA--YATKF 247
Query: 108 DPAS 97
P++
Sbjct: 248 TPSA 251
>ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis] gi|300261970|gb|EFJ46179.1| hypothetical
protein VOLCADRAFT_81918 [Volvox carteri f. nagariensis]
Length = 251
Score = 369 bits (947), Expect = 2e-99
Identities = 187/244 (76%), Positives = 204/244 (83%), Gaps = 2/244 (0%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGL 643
SVR T A + R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGL
Sbjct: 12 SVRPVTVASRAA--RVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGL 69
Query: 642 SADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGL 463
SADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF GL
Sbjct: 70 SADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGL 129
Query: 462 NYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDP 289
NYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP
Sbjct: 130 NYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDP 189
Query: 288 VTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKF 109
TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI+NL+DHLA+P N FA ATKF
Sbjct: 190 DTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFA--YATKF 247
Query: 108 DPAS 97
P++
Sbjct: 248 TPSA 251
>ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis] gi|300265820|gb|EFJ50010.1| hypothetical
protein VOLCADRAFT_80470 [Volvox carteri f. nagariensis]
Length = 252
Score = 368 bits (945), Expect = 3e-99
Identities = 186/247 (75%), Positives = 205/247 (82%), Gaps = 5/247 (2%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQ---VTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDT 652
+VR + P G+R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDT
Sbjct: 8 AVRSTSVRPTPVGSRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 67
Query: 651 AGLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDN 472
AGLSADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF
Sbjct: 68 AGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAE 127
Query: 471 DGLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLA 298
GLNYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLA
Sbjct: 128 GGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLA 187
Query: 297 DDPVTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVA 118
DDP TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI+NL+DHLA+P N FA A
Sbjct: 188 DDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFA--YA 245
Query: 117 TKFDPAS 97
TKF P++
Sbjct: 246 TKFTPSA 252
>ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 366 bits (940), Expect = 1e-98
Identities = 190/245 (77%), Positives = 209/245 (85%), Gaps = 3/245 (1%)
Frame = -1
Query: 828 GQSVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTA 649
G S+R A KGQGN+QVTRAA+E+YGPDRA FLGPF+E +PSYL+GEFPGDYGWDTA
Sbjct: 7 GASLRSAVPT-KGQGNKQVTRAAIEFYGPDRAGFLGPFTE--SPSYLKGEFPGDYGWDTA 63
Query: 648 GLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDND 469
GLSADPETF+RYREIEVIHARWA+LGALG +TPELL+K G+ F EA WFKAGAQIF +D
Sbjct: 64 GLSADPETFARYREIEVIHARWAMLGALGCVTPELLAKN-GVSFGEAVWFKAGAQIFGSD 122
Query: 468 GLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANG---GPAGDPDLYPGGYFDPLGLA 298
GLNYLGNPSLVHAQSII TLA QV++MG AEAYRANG G G LYPGG FDPLGLA
Sbjct: 123 GLNYLGNPSLVHAQSIIATLACQVILMGGAEAYRANGEGPGVEGLDSLYPGGPFDPLGLA 182
Query: 297 DDPVTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVA 118
DDP TFAELK KEIKNGRLAMF+ FGFFVQAIVTGKGPI+NL+DHLADP NNGFA+ A
Sbjct: 183 DDPDTFAELKTKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNNGFAA--A 240
Query: 117 TKFDP 103
TKF P
Sbjct: 241 TKFAP 245
>ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis] gi|300258258|gb|EFJ42496.1| hypothetical
protein VOLCADRAFT_77072 [Volvox carteri f. nagariensis]
Length = 250
Score = 366 bits (940), Expect = 1e-98
Identities = 182/230 (79%), Positives = 197/230 (85%), Gaps = 2/230 (0%)
Frame = -1
Query: 780 RQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGLSADPETFSRYREIE 601
R V RAA+EWYGPDR KFLGPFSE PSYL GEFPGDYGWDTAGLSADPETF RYRE+E
Sbjct: 23 RVVPRAAIEWYGPDRPKFLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKRYRELE 82
Query: 600 VIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLVHAQSI 421
+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF GLNYLGN +LVHAQSI
Sbjct: 83 LIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHAQSI 142
Query: 420 IGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPVTFAELKVKEIKNG 247
I TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP TFAELKVKEIKNG
Sbjct: 143 IATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNG 202
Query: 246 RLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 97
RLAMF+ FGFFVQAIVTGKGPI+NL+DHLA+P N FA ATKF P++
Sbjct: 203 RLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFA--YATKFTPSA 250
>gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina] gi|90191873|gb|ABD91648.1| major
light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
Length = 253
Score = 362 bits (930), Expect = 2e-97
Identities = 183/228 (80%), Positives = 195/228 (85%), Gaps = 4/228 (1%)
Frame = -1
Query: 774 VTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGLSADPETFSRYREIEVI 595
V RAAVE+YGPDRAKFLGPFSE TP YL GEFPGDYGWDTAGLSADP+TF+RYREIE+I
Sbjct: 26 VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85
Query: 594 HARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLVHAQSIIG 415
HARWALLGALGILTPELLS+YAG++F E WFKAGAQIF + GLNYLGN SL+HAQSII
Sbjct: 86 HARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIA 145
Query: 414 TLAFQVVVMGLAEAYRANGGPAGDPD----LYPGGYFDPLGLADDPVTFAELKVKEIKNG 247
TLA QVV+MGLAEAYRANGG G D LYPGG FDPLGLADDP TFAELKVKEIKNG
Sbjct: 146 TLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNG 205
Query: 246 RLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 103
RLAMF+ GFFVQAIVTGKGP+ NL DHLADP NN FAS ATKF P
Sbjct: 206 RLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNNAFAS--ATKFTP 251
>gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina] gi|90191875|gb|ABD91649.1| major
light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
Length = 253
Score = 361 bits (927), Expect = 4e-97
Identities = 183/228 (80%), Positives = 194/228 (85%), Gaps = 4/228 (1%)
Frame = -1
Query: 774 VTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGLSADPETFSRYREIEVI 595
V RAAVE+YGPDRAKFLGPFSE TP YL GEFPGDYGWDTAGLSADP+TF+RYREIE+I
Sbjct: 26 VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85
Query: 594 HARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLVHAQSIIG 415
HARWALLGALGILTPELLS+YAG++F E WFKAGAQIF GLNYLGN SL+HAQSII
Sbjct: 86 HARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAAGGLNYLGNESLIHAQSIIA 145
Query: 414 TLAFQVVVMGLAEAYRANGGPAGDPD----LYPGGYFDPLGLADDPVTFAELKVKEIKNG 247
TLA QVV+MGLAEAYRANGG G D LYPGG FDPLGLADDP TFAELKVKEIKNG
Sbjct: 146 TLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNG 205
Query: 246 RLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 103
RLAMF+ GFFVQAIVTGKGP+ NL DHLADP NN FAS ATKF P
Sbjct: 206 RLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNNAFAS--ATKFTP 251
>ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII type I, chloroplastic
[Auxenochlorella protothecoides]
gi|675352040|gb|KFM24480.1| Chlorophyll a-b binding
protein of LHCII type I, chloroplastic [Auxenochlorella
protothecoides]
Length = 250
Score = 360 bits (925), Expect = 6e-97
Identities = 175/239 (73%), Positives = 200/239 (83%), Gaps = 2/239 (0%)
Frame = -1
Query: 813 RATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGLSAD 634
R+ G+G RQVTRAA E+YGP+R K+LGPFS +STP YL+GE+PGDYGWDTAGLSAD
Sbjct: 14 RSAVPTAGRGTRQVTRAAAEFYGPNRVKWLGPFSGDSTPDYLKGEYPGDYGWDTAGLSAD 73
Query: 633 PETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYL 454
PETF+RYRE+EVIHARWALLGALGI+TPELL + F EA WFKAG+QIF + GL+YL
Sbjct: 74 PETFARYRELEVIHARWALLGALGIITPELLERNGAASFGEAVWFKAGSQIFQSGGLDYL 133
Query: 453 GNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPVTF 280
GNPSLVHAQSI+ TL QV++MGL E YR NGGPAG+ LYPG FDPLGLADDP
Sbjct: 134 GNPSLVHAQSIVATLISQVILMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDAL 193
Query: 279 AELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 103
AELKVKE+KNGRLAMFANFGFFVQAIVTGKGP++NL+DHLADP+ NNGFA+ ATKF P
Sbjct: 194 AELKVKELKNGRLAMFANFGFFVQAIVTGKGPLENLSDHLADPWTNNGFAA--ATKFTP 250
>sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein
[Dunaliella tertiolecta]
Length = 253
Score = 360 bits (924), Expect = 8e-97
Identities = 182/228 (79%), Positives = 194/228 (85%), Gaps = 4/228 (1%)
Frame = -1
Query: 774 VTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGLSADPETFSRYREIEVI 595
V RAAVE+YGPDRAKFLGPFSE TP YL GEFPGDYGWDTAGLSADP+TF+RYREIE+I
Sbjct: 26 VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85
Query: 594 HARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLVHAQSIIG 415
HARWALLGALGILTPELLS+YAG++F E WFKAGAQIF + GLNYLGN SL+HAQSII
Sbjct: 86 HARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIA 145
Query: 414 TLAFQVVVMGLAEAYRANGGPAGDPD----LYPGGYFDPLGLADDPVTFAELKVKEIKNG 247
TLA QVV+MGLAEAYRANGG G D LYPGG FDPLGLADDP TFAELKVKEIKNG
Sbjct: 146 TLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNG 205
Query: 246 RLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 103
RLAMF+ GFFVQAIVTGKGP+ NL DHLADP N FAS ATKF P
Sbjct: 206 RLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFAS--ATKFTP 251
>ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii] gi|15430556|dbj|BAB64413.1|
light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii] gi|15430564|dbj|BAB64417.1|
light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii] gi|158277154|gb|EDP02923.1|
light-harvesting protein of photosystem II
[Chlamydomonas reinhardtii]
Length = 249
Score = 358 bits (918), Expect = 4e-96
Identities = 184/244 (75%), Positives = 201/244 (82%), Gaps = 2/244 (0%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGL 643
SVR S G+ R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGL
Sbjct: 12 SVRPTVS---GRSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGL 68
Query: 642 SADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGL 463
SADPETF RYRE+E+IHARWA+LGALG +TPELL+K GI F EA WFKAGAQIF GL
Sbjct: 69 SADPETFKRYRELELIHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGAQIFAEGGL 127
Query: 462 NYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDP 289
NYLGN +L+HAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP
Sbjct: 128 NYLGNENLIHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDP 187
Query: 288 VTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKF 109
TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI NL+DHLA+P N FA ATKF
Sbjct: 188 DTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFA--YATKF 245
Query: 108 DPAS 97
P++
Sbjct: 246 TPSA 249
>ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 358 bits (918), Expect = 4e-96
Identities = 187/245 (76%), Positives = 206/245 (84%), Gaps = 3/245 (1%)
Frame = -1
Query: 828 GQSVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTA 649
G S+R A G+GNRQVTRAA+E+YGPDRA FLGPF++ TPSYL GEFPGDYGWDTA
Sbjct: 12 GASLRSAVPTA-GKGNRQVTRAAIEFYGPDRATFLGPFTD--TPSYLNGEFPGDYGWDTA 68
Query: 648 GLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDND 469
GLSADPETF+RYREIEVIHARWA+LGALG +TPELL+K G+ F EA WFKAGAQIF +D
Sbjct: 69 GLSADPETFARYREIEVIHARWAMLGALGCVTPELLAKN-GVSFGEAVWFKAGAQIFGSD 127
Query: 468 GLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANG---GPAGDPDLYPGGYFDPLGLA 298
GLNYLGN SLVHAQSII TLA QV++MG AEAYRA G G G LYPGG FDPLGLA
Sbjct: 128 GLNYLGNSSLVHAQSIIATLACQVILMGGAEAYRAAGEGPGLEGLDSLYPGGPFDPLGLA 187
Query: 297 DDPVTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVA 118
DDP TF+ELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI+NL+DHLADP NNGFA+ A
Sbjct: 188 DDPDTFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNNGFAA--A 245
Query: 117 TKFDP 103
TKF P
Sbjct: 246 TKFAP 250
>ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis] gi|300261969|gb|EFJ46178.1| hypothetical
protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
Length = 270
Score = 358 bits (918), Expect = 4e-96
Identities = 178/235 (75%), Positives = 196/235 (83%), Gaps = 2/235 (0%)
Frame = -1
Query: 795 KGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGLSADPETFSR 616
K G+ ++ WYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGLSADPETF R
Sbjct: 38 KSSGSTAPQLSSWPWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKR 97
Query: 615 YREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLV 436
YRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF GLNYLGN +LV
Sbjct: 98 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLV 157
Query: 435 HAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPVTFAELKVK 262
HAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP TFAELKVK
Sbjct: 158 HAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVK 217
Query: 261 EIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 97
EIKNGRLAMF+ FGFFVQAIVTGKGPI+NL+DHLA+P N FA ATKF P++
Sbjct: 218 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFA--YATKFTPSA 270
>gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein LhcbM2a
[Chlamydomonas incerta]
Length = 246
Score = 357 bits (916), Expect = 7e-96
Identities = 184/244 (75%), Positives = 201/244 (82%), Gaps = 2/244 (0%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGL 643
SVR S G+ R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGL
Sbjct: 9 SVRPTVS---GRSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGL 65
Query: 642 SADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGL 463
SADPETF RYRE+E+IHARWA+LGALG +TPELL+K GI F EA WFKAG+QIF GL
Sbjct: 66 SADPETFKRYRELELIHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGSQIFAEGGL 124
Query: 462 NYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDP 289
NYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP
Sbjct: 125 NYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDP 184
Query: 288 VTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKF 109
TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI NL+DHLA+P N FA ATKF
Sbjct: 185 DTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFA--YATKF 242
Query: 108 DPAS 97
P++
Sbjct: 243 TPSA 246
>ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii] gi|12658406|gb|AAK01125.1|AF330793_1
light-harvesting complex II protein precursor
[Chlamydomonas reinhardtii] gi|158277282|gb|EDP03051.1|
chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 249
Score = 356 bits (914), Expect = 1e-95
Identities = 183/244 (75%), Positives = 201/244 (82%), Gaps = 2/244 (0%)
Frame = -1
Query: 822 SVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGL 643
SVR S+ + R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGL
Sbjct: 12 SVRSTVSS---RSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGL 68
Query: 642 SADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGL 463
SADPETF RYRE+E+IHARWA+LGALG +TPELL+K GI F EA WFKAGAQIF GL
Sbjct: 69 SADPETFKRYRELELIHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGAQIFAEGGL 127
Query: 462 NYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDP 289
NYLGN +L+HAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP
Sbjct: 128 NYLGNENLIHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDP 187
Query: 288 VTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKF 109
TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI NL+DHLA+P N FA ATKF
Sbjct: 188 DTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFA--YATKF 245
Query: 108 DPAS 97
P++
Sbjct: 246 TPSA 249
>gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein LhcbM2b
[Chlamydomonas incerta]
Length = 229
Score = 355 bits (910), Expect = 4e-95
Identities = 179/230 (77%), Positives = 195/230 (84%), Gaps = 2/230 (0%)
Frame = -1
Query: 780 RQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTAGLSADPETFSRYREIE 601
R V RAA+EWYGPDR KFLGPFSE TP+YL GEFPGDYGWDTAGLSADPETF RYRE+E
Sbjct: 3 RVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELE 62
Query: 600 VIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLVHAQSI 421
+IHARWA+LGALG +TPELL+K GI F EA WFKAG+QIF GLNYLGN +LVHAQSI
Sbjct: 63 LIHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGSQIFAEGGLNYLGNENLVHAQSI 121
Query: 420 IGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPVTFAELKVKEIKNG 247
I TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDP TFAELKVKEIKNG
Sbjct: 122 IATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNG 181
Query: 246 RLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 97
RLAMF+ FGFFVQAIVTGKGPI NL+DHLA+P N FA ATKF P++
Sbjct: 182 RLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFA--YATKFTPSA 229
>sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|18063|emb|CAA38635.1| chlorophyll a/b-binding protein
[Chlamydomonas moewusii]
Length = 256
Score = 352 bits (903), Expect = 2e-94
Identities = 177/246 (71%), Positives = 199/246 (80%), Gaps = 7/246 (2%)
Frame = -1
Query: 813 RATSAPKGQGNRQVTRA-----AVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTA 649
+ +A K G +Q A +EWYGPDRAK+LGPFS +TP+YL GEFPGDYGWDTA
Sbjct: 14 KVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFST-NTPAYLTGEFPGDYGWDTA 72
Query: 648 GLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDND 469
GLSADPETF +YRE+EVIHARWALLGALGILTPELLS YAG+KF E WFKAGAQIF
Sbjct: 73 GLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEG 132
Query: 468 GLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLAD 295
GL+YLG+P+L+HAQ+I+ TLA QVV+MGL E YR NGGPAG+ LYPG FDPLGLAD
Sbjct: 133 GLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLAD 192
Query: 294 DPVTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVAT 115
DP TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI NL DHLADP NN FA+ AT
Sbjct: 193 DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAA--AT 250
Query: 114 KFDPAS 97
KF P++
Sbjct: 251 KFTPSA 256
>ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis] gi|300266818|gb|EFJ51004.1| hypothetical
protein VOLCADRAFT_79865 [Volvox carteri f. nagariensis]
Length = 254
Score = 350 bits (899), Expect = 7e-94
Identities = 175/246 (71%), Positives = 199/246 (80%), Gaps = 2/246 (0%)
Frame = -1
Query: 828 GQSVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTA 649
G+ +APK G +EWYGP+RAK+LGP+SE +TP+YL GEFPGDYGWDTA
Sbjct: 20 GKKAAAKPAAPKSSG--------IEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTA 71
Query: 648 GLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDND 469
GLSADPETF RYRE+E+IHARWA+LGALG LTPELLSK G++F EA WFKAGAQIF
Sbjct: 72 GLSADPETFKRYRELELIHARWAMLGALGCLTPELLSK-NGVQFGEAVWFKAGAQIFQEG 130
Query: 468 GLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLAD 295
GL+YLGNPSLVHAQ+I+ TLA QV++MGL E YR NGGPAG+ LYPG FDPLGLAD
Sbjct: 131 GLDYLGNPSLVHAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLAD 190
Query: 294 DPVTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVAT 115
DP TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA AT
Sbjct: 191 DPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FAT 248
Query: 114 KFDPAS 97
KF P++
Sbjct: 249 KFTPSA 254
>ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis] gi|300256057|gb|EFJ40333.1| hypothetical
protein VOLCADRAFT_84524 [Volvox carteri f. nagariensis]
Length = 254
Score = 350 bits (899), Expect = 7e-94
Identities = 175/246 (71%), Positives = 199/246 (80%), Gaps = 2/246 (0%)
Frame = -1
Query: 828 GQSVRRATSAPKGQGNRQVTRAAVEWYGPDRAKFLGPFSEESTPSYLQGEFPGDYGWDTA 649
G+ +APK G +EWYGP+RAK+LGP+SE +TP+YL GEFPGDYGWDTA
Sbjct: 20 GKKAAAKPAAPKSSG--------IEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTA 71
Query: 648 GLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDND 469
GLSADPETF RYRE+E+IHARWA+LGALG LTPELLSK G++F EA WFKAGAQIF
Sbjct: 72 GLSADPETFKRYRELELIHARWAMLGALGCLTPELLSK-NGVQFGEAVWFKAGAQIFQEG 130
Query: 468 GLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLAD 295
GL+YLGNPSLVHAQ+I+ TLA QV++MGL E YR NGGPAG+ LYPG FDPLGLAD
Sbjct: 131 GLDYLGNPSLVHAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLAD 190
Query: 294 DPVTFAELKVKEIKNGRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVAT 115
DP TFAELKVKEIKNGRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA AT
Sbjct: 191 DPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FAT 248
Query: 114 KFDPAS 97
KF P++
Sbjct: 249 KFTPSA 254