BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00012758
         (1214 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   473   e-130
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     466   e-128
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   466   e-128
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     465   e-128
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     462   e-127
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     460   e-126
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   459   e-126
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   456   e-125
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892...   445   e-122
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         443   e-121
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...   442   e-121
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   429   e-117
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   429   e-117
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   429   e-117
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   428   e-117
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   427   e-117
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   427   e-117
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        427   e-117
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           426   e-116
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   423   e-115

>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  473 bits (1216), Expect = e-130
 Identities = 244/411 (59%), Positives = 297/411 (72%), Gaps = 9/411 (2%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PANY DL+VFGC AY HV++GKLEPR+ K IFLGYP GVKGY++W P+ K  KVVISR
Sbjct: 858  GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 915

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXX 872
            +VVF E  MLH K    V     ++   +VE + +S      ++ +++            
Sbjct: 916  NVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSS 975

Query: 871  XXXXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDS 701
                    SIAKDRP+R IK P      A+ V +A   A+EIE  ++P  Y EAI  +D 
Sbjct: 976  IVQQSPKRSIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDC 1035

Query: 700  AKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKG 521
             +W+ AM +E+ESL KNHTWEL   P+ KK + CKW++K+KEGI   ++ARYKARL+AKG
Sbjct: 1036 NRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKG 1095

Query: 520  YSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPE 341
            YSQ+ G+DFND+FSPVVKH+SIR LL++VAMHD ELEQ+DVKTAFLHGELEE IYM+QP+
Sbjct: 1096 YSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPK 1155

Query: 340  GFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSF 161
            GF V GKE+ VC LK+SLYGLKQSPRQWYKRFD FM S  + RS YDSCVY  K+ DGS 
Sbjct: 1156 GFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSA 1214

Query: 160  IYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            IYLLLYVDDMLI AK KS+I +LKA+LS EFEMKDLGAAKKILGMEI R R
Sbjct: 1215 IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKR 1265


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  466 bits (1198), Expect = e-128
 Identities = 240/411 (58%), Positives = 295/411 (71%), Gaps = 9/411 (2%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PANY DL+VFGC AY HV++GKLEPR+ K IFLGYP GVKGY++W P+ K  KVVISR
Sbjct: 686  GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 743

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXX 872
            +VVF E  +LH K    V     ++   +VE + +S      +N +++            
Sbjct: 744  NVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSS 803

Query: 871  XXXXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDS 701
                    SIAKD+P+R IK P      A+ V +A   A+EIE  ++P  Y EAI  +D 
Sbjct: 804  IVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDC 863

Query: 700  AKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKG 521
             +W+ AM +E+ESL KNHTWE    P+ KK + CKW++K+KEG+   ++ARYKARLVAKG
Sbjct: 864  NRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 923

Query: 520  YSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPE 341
            YSQ+ G+DFND+FSP++KH+SIR LL +VAMHD ELEQ+DVKTAFLHGELEE IYM+QPE
Sbjct: 924  YSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 983

Query: 340  GFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSF 161
            GF V GKE+ VC LK+SLYGLKQSPRQWYKRFD FM S  + RS YDSCVY  K+ DGS 
Sbjct: 984  GFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSA 1042

Query: 160  IYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            IYLLLYVDDMLI AK KS+I +LKA+LS EF MKDLGAAKKILGMEI R+R
Sbjct: 1043 IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRER 1093


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  466 bits (1198), Expect = e-128
 Identities = 240/411 (58%), Positives = 295/411 (71%), Gaps = 9/411 (2%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PANY DL+VFGC AY HV++GKLEPR+ K IFLGYP GVKGY++W P+ K  KVVISR
Sbjct: 686  GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 743

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXX 872
            +VVF E  +LH K    V     ++   +VE + +S      +N +++            
Sbjct: 744  NVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSS 803

Query: 871  XXXXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDS 701
                    SIAKD+P+R IK P      A+ V +A   A+EIE  ++P  Y EAI  +D 
Sbjct: 804  IVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDC 863

Query: 700  AKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKG 521
             +W+ AM +E+ESL KNHTWE    P+ KK + CKW++K+KEG+   ++ARYKARLVAKG
Sbjct: 864  NRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 923

Query: 520  YSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPE 341
            YSQ+ G+DFND+FSP++KH+SIR LL +VAMHD ELEQ+DVKTAFLHGELEE IYM+QPE
Sbjct: 924  YSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 983

Query: 340  GFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSF 161
            GF V GKE+ VC LK+SLYGLKQSPRQWYKRFD FM S  + RS YDSCVY  K+ DGS 
Sbjct: 984  GFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSA 1042

Query: 160  IYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            IYLLLYVDDMLI AK KS+I +LKA+LS EF MKDLGAAKKILGMEI R+R
Sbjct: 1043 IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRER 1093


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  465 bits (1196), Expect = e-128
 Identities = 242/411 (58%), Positives = 296/411 (72%), Gaps = 9/411 (2%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PANY DL+VFGC AY HV++GKLEPR  K IFLGY  GVKGY++W P+ K  KVVISR
Sbjct: 560  GSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETK--KVVISR 617

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXX 872
            +VVF E  MLH K    V     ++V  +VE + +S      ++ +++            
Sbjct: 618  NVVFHESIMLHDKPSTNVPVESQEKVSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSS 677

Query: 871  XXXXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDS 701
                    SIAKDRP+R  K P      A+ V +A   A+EIE  ++P  Y +AI  +D 
Sbjct: 678  IVQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDC 737

Query: 700  AKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKG 521
             +W+ AM +E+ESL KNH+WEL   P+ KK + CKW++K+KEG+   ++ARYKARLVAKG
Sbjct: 738  NRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 797

Query: 520  YSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPE 341
            YSQ+ G+DFND+FSPVVKH+SIR LL++VAMHD ELEQ+DVKTAFLHGELEE IYM+QPE
Sbjct: 798  YSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 857

Query: 340  GFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSF 161
            GF V GKE+ VC LK+SLYGLKQSPRQWYKRFD FM S  + RS YDSCVY  K+ DGS 
Sbjct: 858  GFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSA 916

Query: 160  IYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            IYLLLYVDDMLI AK KS+I +LKA+LS EFEMKDLGAAKKILGMEI R+R
Sbjct: 917  IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRER 967


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  462 bits (1188), Expect = e-127
 Identities = 239/411 (58%), Positives = 296/411 (72%), Gaps = 9/411 (2%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PANY DL+VFGC AY HV++GKLEPR+ K IFLGYP GVK Y++W P  K+ KVVISR
Sbjct: 530  GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKDYKLWCP--KTKKVVISR 587

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXX 872
            +VVF E  MLH K    V     ++   +VE + +S      ++ +++            
Sbjct: 588  NVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDASVIEDSDSS 647

Query: 871  XXXXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDS 701
                    SIAKD+P+R IK P      A+ V +A   A+EIE  ++P  Y EAI  +  
Sbjct: 648  AVQQSPKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDGC 707

Query: 700  AKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKG 521
             +W+ AM +E+ESL KNHTWEL   P+ KK + CKW++K+K+G+   ++ARYKARLVAKG
Sbjct: 708  NRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKG 767

Query: 520  YSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPE 341
            YSQ+ G+DFND+FSPV+KH+SIR LL++VA+HD ELEQ+DVKTAFLHGELEE IYM+QPE
Sbjct: 768  YSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPE 827

Query: 340  GFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSF 161
            GF V GKE+ V  LK+SLYGLKQSPRQWYKRFD FMFS  + RS YDSCVY  K+ DGS 
Sbjct: 828  GFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYL-KVVDGSS 886

Query: 160  IYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            IYLLLYVDDMLI AK KS+I +LKA+LS EFEMKDLGAAKKILGMEI R+R
Sbjct: 887  IYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRER 937


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  460 bits (1183), Expect = e-126
 Identities = 238/411 (57%), Positives = 293/411 (71%), Gaps = 9/411 (2%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G P NY DL+VFGC AY HV++GKLEPR+ K IFLGY  GVKGY++W P+ K  KVVISR
Sbjct: 623  GSPTNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETK--KVVISR 680

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXX 872
            +VVF E  +LH K    V     ++   +VE + +S      ++ +++            
Sbjct: 681  NVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSS 740

Query: 871  XXXXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDS 701
                    SIAKD+P+R IK P      A  V +A   A++IE  ++P  Y EAI  +D 
Sbjct: 741  IVHQSPKRSIAKDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDC 800

Query: 700  AKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKG 521
             +W+ AM +E+ESL KNHTWEL   P+ KK + CKW++K+KEG+   ++ARYKARLVAKG
Sbjct: 801  NRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 860

Query: 520  YSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPE 341
            YSQ+ G+DFND+FSPVVKH+SIR LL +VAMHD ELEQ++VKTAFLHGELEE IYM+QPE
Sbjct: 861  YSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPE 920

Query: 340  GFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSF 161
            GF V GKE+ VC LK+SLYGLKQSPRQWYKRFD FM S  +  S YDSCVY  K+ DGS 
Sbjct: 921  GFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYL-KVVDGSV 979

Query: 160  IYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            IYLLLYVDDMLI AK KS+I +LKA+LS EFEMKDLGAAKKILGMEI R+R
Sbjct: 980  IYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRER 1030


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  459 bits (1182), Expect = e-126
 Identities = 239/409 (58%), Positives = 296/409 (72%), Gaps = 7/409 (1%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            GK A+Y +LK FGC AY HV++GKLEPR+KKG+F+GY  GVKG+R+W P  K  +V++SR
Sbjct: 629  GKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEK--RVIMSR 686

Query: 1033 DVVFDEMAMLHP-KKELVVSD--SVPKQVEFRV-EEVSTSQNGSVSGPFXXXXXXXXXXX 866
            +VVFDE  +L    K    S+  S+ KQVEF+V +  S  +                   
Sbjct: 687  NVVFDESPLLRTIVKPTTTSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESM 746

Query: 865  XXXXXHSIAKDRPRREIKKPSS---LADYVTFACVAAQEIESPSDPCNYHEAISCEDSAK 695
                  SIA+DRPRR   +P +     D V +A   A+E+++ S+P  Y EAI   DS K
Sbjct: 747  PSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDT-SEPSTYKEAILSSDSEK 805

Query: 694  WLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKGYS 515
            W  AM +E+ESLHKN TW+L + P G+KI+ CKWV+KKKEGI   E  +YKAR+VA+G++
Sbjct: 806  WFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFN 865

Query: 514  QVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPEGF 335
            Q +GVD+N+IFSPVV+HTSIRVLLA+VA  +LELEQLDVKTAFLHGELEE IYM QP+GF
Sbjct: 866  QREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGF 925

Query: 334  EVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSFIY 155
            +V GKE+HVC LK+SLYGLKQSPRQWYKRFD +M   GY+RS YD CVY+ +L D SFIY
Sbjct: 926  QVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIY 985

Query: 154  LLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            L+LYVDDMLI AKKK DI +LK  LS EFEMKDLGAA+KILGMEI RDR
Sbjct: 986  LVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDR 1034


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  456 bits (1172), Expect = e-125
 Identities = 241/419 (57%), Positives = 291/419 (69%), Gaps = 15/419 (3%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            GKP+NY  LK+FGCPAY HV+DGKLEPR+ K IFLGY  GVKGYR+W  + ++ K +ISR
Sbjct: 750  GKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISR 809

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPK-------QVEFRVEEVSTSQNGSVSGPFXXXXXXXX 875
            DV FDE AM   +KE        K       +VEF V+  +  +NG              
Sbjct: 810  DVTFDESAMFGQRKEFGDLAGTSKTDLGANQKVEFEVD--APMENG------VDDTSEEQ 861

Query: 874  XXXXXXXXHSIAKDRPRREIKKPSSLADYVT--------FACVAAQEIESPSDPCNYHEA 719
                     SIA  RPRREI++P    D V+        FA   A+EI    +P +Y EA
Sbjct: 862  PVIDQNDSQSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEI-GREEPRSYKEA 920

Query: 718  ISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKA 539
            +  +DS KWL +M +E+ SL KN TWEL   PEG K V CKW++K K+GI   E  +YK+
Sbjct: 921  MESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKS 980

Query: 538  RLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETI 359
            RLVAKG+SQ +G+D+N++FSPVVKH SIRVLLA+V++ +LEL+QLDVKTAFLHG LEE I
Sbjct: 981  RLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEI 1040

Query: 358  YMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRK 179
            YM+QPEGF    K DHVC LK+SLYGLKQSPRQWYKRFD FM SH + R+QYDSCVYF+ 
Sbjct: 1041 YMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKT 1100

Query: 178  LEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDRFA 2
            L DGSFIYLLLYVDDMLI AK +++IN+LK  LS EFEMKDLGAAKKILGMEI RDR A
Sbjct: 1101 LPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDA 1159


>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
            vulgaris]
          Length = 1947

 Score =  445 bits (1144), Expect = e-122
 Identities = 237/437 (54%), Positives = 284/437 (64%), Gaps = 36/437 (8%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G+ A Y  L+VFGC  Y HVN+GKLEPR+KKG FLGY  GVKGYR+W   P   +V++SR
Sbjct: 718  GRSAEYSGLRVFGCMVYYHVNEGKLEPRAKKGCFLGYGDGVKGYRIW--SPSEGRVILSR 775

Query: 1033 DVVFDEMAML---------------HPKKELVVSDSVPKQVEFRVEEVSTSQNGSVSGPF 899
            DV FDE  M                   +++V  D  P+     V          VS P 
Sbjct: 776  DVTFDENTMFVSANKPAGDTDESTDEGSEQVVAPDPTPQ-----VRTQGKDNEAPVSSPI 830

Query: 898  XXXXXXXXXXXXXXXXHSI--------AKDRPRREIKK-------------PSSLADYVT 782
                                        + RPR++ ++                + + + 
Sbjct: 831  VETSQRDVAVVDETADVESDHEETVVEGQKRPRKKTQRLIEQIEGRNVPGRNCCVEEMIG 890

Query: 781  FACVAAQEIESPSDPCNYHEAISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVG 602
            +A   A++IESP +P +Y EA+S  +SAKWL+AM EE+ESLHKN TWEL   P+G+K+VG
Sbjct: 891  YALHVAEDIESP-EPMSYKEAVSSNESAKWLVAMSEEMESLHKNQTWELVRIPQGRKVVG 949

Query: 601  CKWVYKKKEGIPGVEDARYKARLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHD 422
            CKWV+K+KEG    E  RYKARLVAKG+SQ +GVD+N+IFSPVV+HTSIRVLLA+VA  D
Sbjct: 950  CKWVFKRKEGTSEGESVRYKARLVAKGFSQREGVDYNEIFSPVVRHTSIRVLLAMVAHFD 1009

Query: 421  LELEQLDVKTAFLHGELEETIYMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFD 242
            LELEQLDVKTAFLHGELEE I M QPEGF V GKE   C LK+SLYGLKQSPRQWYKRFD
Sbjct: 1010 LELEQLDVKTAFLHGELEEDILMSQPEGFVVPGKEKFACSLKKSLYGLKQSPRQWYKRFD 1069

Query: 241  GFMFSHGYSRSQYDSCVYFRKLEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEM 62
             FM  HG+ RS YD CVY  K+EDGS+IYLLLYVDDMLI AKKKSD+ +LK  LS EF+M
Sbjct: 1070 SFMVEHGFDRSPYDCCVYHSKVEDGSYIYLLLYVDDMLIAAKKKSDVLKLKKLLSSEFDM 1129

Query: 61   KDLGAAKKILGMEIERD 11
            KDLGAAKKILGMEI RD
Sbjct: 1130 KDLGAAKKILGMEIYRD 1146


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  443 bits (1139), Expect = e-121
 Identities = 229/403 (56%), Positives = 284/403 (70%), Gaps = 9/403 (2%)
 Frame = -2

Query: 1207 PANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISRDV 1028
            P NY DL+VFGC AY HV++GKLEPR+ K IFLGYP G+KGY++W P  K+ KVVISR+V
Sbjct: 435  PVNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGMKGYKLWCP--KTKKVVISRNV 492

Query: 1027 VFDEMAMLHPKKELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXXXX 866
            VF E  MLH K    V     ++   +VE + +S      +N +++              
Sbjct: 493  VFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDVPVIEDSDSSTV 552

Query: 865  XXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDSAK 695
                   IAKD+P+R  K P      A+ V +A   A++IE  ++P  Y EAI  +D  +
Sbjct: 553  QQSPKRFIAKDKPKRNTKPPQRYIEEANIVAYALSVAEDIEGNAEPSTYSEAIVSDDCNR 612

Query: 694  WLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKGYS 515
            W+ AM +E+ESL KNHTWEL   P+ KK + CKW++K+K+GI   ++A YKARLVAKGYS
Sbjct: 613  WITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMYKARLVAKGYS 672

Query: 514  QVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPEGF 335
            Q+ G+DFND+FSPVVKH+SIR LL++VAMHD ELEQ+DVKTAFLHGELEE IYM+Q EGF
Sbjct: 673  QIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQSEGF 732

Query: 334  EVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSFIY 155
             V GKE+ VC LK+SLYGLKQS RQWYKRFD FM S  + RS YDSCVY  K+ DGS IY
Sbjct: 733  VVPGKENLVCRLKKSLYGLKQSSRQWYKRFDSFMLSQKFRRSNYDSCVYV-KVADGSAIY 791

Query: 154  LLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGM 26
            LLLYVDDMLI AK KS+I +LKA+LS EFEMKDLGA KKIL +
Sbjct: 792  LLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAVKKILDL 834


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
            vulgaris]
          Length = 2676

 Score =  442 bits (1136), Expect = e-121
 Identities = 223/392 (56%), Positives = 287/392 (73%), Gaps = 5/392 (1%)
 Frame = -2

Query: 1168 AYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISRDVVFDEMAMLHPKKE 989
            +Y+HV + KLEPR++K +F+GY  GVKGYRVW    KS +V+ SRDVVFDE  M+ P+KE
Sbjct: 528  SYIHVKEDKLEPRARKCVFIGYGLGVKGYRVWCE--KSRRVITSRDVVFDESCMITPEKE 585

Query: 988  LVVSDSVPKQVEF--RVEEVSTSQNGSVSGPFXXXXXXXXXXXXXXXXHSIAKDRPRREI 815
            L + + V    +   +VE  S SQ+ +++                    ++A +R RR+I
Sbjct: 586  LSICNDVGSSHDTGEKVELESASQDDALT------HERHVEASPQTQRKTLASERQRRQI 639

Query: 814  KKPSSLA---DYVTFACVAAQEIESPSDPCNYHEAISCEDSAKWLIAMQEEVESLHKNHT 644
            K P       DYV +A   A E+E+  DPC+Y EA+S  DS+KWL+AM++E+ESLHKN+ 
Sbjct: 640  KPPQRYVEECDYVQYALTVANEVETFDDPCSYKEAMSLPDSSKWLMAMKQEMESLHKNNI 699

Query: 643  WELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKGYSQVQGVDFNDIFSPVVKH 464
            WEL + P+ KKIVGCKWVYK+KEG P      YKAR+VA+ ++QV+GVDF+++F PVVKH
Sbjct: 700  WELVVAPKKKKIVGCKWVYKRKEGTPDSGGPIYKARVVARRFTQVEGVDFHEVFPPVVKH 759

Query: 463  TSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPEGFEVEGKEDHVCLLKRSLY 284
            +SIRVLLAL AM DLEL QLDVKTAFLHG+LEE IYM+QP+GFEVEGKE+HVC L +SLY
Sbjct: 760  SSIRVLLALEAMEDLELHQLDVKTAFLHGDLEEEIYMKQPKGFEVEGKEEHVCRLVKSLY 819

Query: 283  GLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSFIYLLLYVDDMLIVAKKKSD 104
            GLKQSPRQWY+RFD FM +H ++RS YDSCVY+++L  GSFIYLLLYVDDML+  K   +
Sbjct: 820  GLKQSPRQWYRRFDSFMLAHEFTRSSYDSCVYYKELVSGSFIYLLLYVDDMLVACKHLIE 879

Query: 103  INRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            +N LK  L+  F+MK+LG AKKILGMEI RDR
Sbjct: 880  VNNLKKLLNSGFDMKNLGEAKKILGMEIWRDR 911


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  429 bits (1104), Expect = e-117
 Identities = 235/419 (56%), Positives = 280/419 (66%), Gaps = 15/419 (3%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            GKP+NY  LK+FGCPAY HV+DGKLEPR+ K IFLGY  GVKGYR+W  + ++ K +ISR
Sbjct: 963  GKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISR 1022

Query: 1033 DVVFDEMAMLHPKKELVVSDSVPK-------QVEFRVEEVSTSQNGSVSGPFXXXXXXXX 875
            DV FDE AM   +KE        K       +VEF V+  +  +NG              
Sbjct: 1023 DVTFDESAMFGQRKEFGDLAGTSKTDLGANQKVEFEVD--APMENG------VDDTSEEQ 1074

Query: 874  XXXXXXXXHSIAKDRPRREIKKPSSLADYVT--------FACVAAQEIESPSDPCNYHEA 719
                     SIA  RPRREI++P    D V+        FA   A+EI    +P +Y EA
Sbjct: 1075 PVIDQNDSQSIAAXRPRREIRRPMRYVDCVSANITNPVAFALAVAEEI-GREEPRSYKEA 1133

Query: 718  ISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKA 539
            +  +DS KWL +M +E+ SL KN TWEL   PEG K V CKW++K K+GI   E  +YK+
Sbjct: 1134 MESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISEDEPPKYKS 1193

Query: 538  RLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETI 359
            RLVAK            +FSPVVKH SIRVLLA+V++ +LEL+QLDVKTAFLHG LEE I
Sbjct: 1194 RLVAK------------VFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEI 1241

Query: 358  YMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRK 179
            YM+QPEGF    K DHVC LK+SLYGLKQSPRQWYKRFD FM SH + R+QYDSCVYF+ 
Sbjct: 1242 YMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKT 1301

Query: 178  LEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDRFA 2
            L DGSFIYLLLYVDDMLI AK +++IN+LK  LS EFEMKDLGAAKKILGMEI RDR A
Sbjct: 1302 LPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDA 1360


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  429 bits (1103), Expect = e-117
 Identities = 226/409 (55%), Positives = 278/409 (67%), Gaps = 7/409 (1%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PA+Y  L+VFGC AY HV++GKLEPR+ K +FLGY  GVKGY++W  +P+++K  +SR
Sbjct: 644  GMPADYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLW--NPETNKTFMSR 701

Query: 1033 DVVFDEMAMLHPKKELVV----SDSVPKQVEFRVEEVSTSQNGSVSGPFXXXXXXXXXXX 866
            +V+F+E  M +      V    SD   + V  +VE V   Q   + G             
Sbjct: 702  NVIFNEFVMFNDSLPTDVIPGGSDEEQQYVSVQVEHVD-DQETEIVGNDVNDTVQHSPSV 760

Query: 865  XXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDSAK 695
                   IA  R +R    P  L    D V +A   A+++E+  +P  Y EA+   D  K
Sbjct: 761  LQPQDEPIAHRRTKRSCGAPVRLIEECDMVYYAFSYAEQVENTLEPATYTEAVVSGDREK 820

Query: 694  WLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKGYS 515
            W+ A+QEE++SL KN TWEL   P+ KK V CKW++K+KEG+   E  R+K RLVAKG+S
Sbjct: 821  WISAIQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFS 880

Query: 514  QVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPEGF 335
            Q+ GVD+ND+FSPVVKH+SIR   ++V MHDLELEQLDVKT FLHGELEE IYM QPEGF
Sbjct: 881  QIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGF 940

Query: 334  EVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSFIY 155
             V GKED+VC LKRSLYGLKQSPRQWYKRFD FM SHG+ RS++DSCVY  K  +GS IY
Sbjct: 941  IVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIY 999

Query: 154  LLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            LLLYVDDMLI AK K  I  LK +LS EF+MKDLGAAKKILGMEI RDR
Sbjct: 1000 LLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDR 1048


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  429 bits (1102), Expect = e-117
 Identities = 228/409 (55%), Positives = 279/409 (68%), Gaps = 7/409 (1%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PA+Y  L+VFGC AY HV++ KLEPR+ K +FLGY  GVKGY++W  +P+++K  +SR
Sbjct: 644  GMPADYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLW--NPETNKTFMSR 701

Query: 1033 DVVFDEMAMLHPKKELVV----SDSVPKQVEFRVEEVSTSQNGSVSGPFXXXXXXXXXXX 866
             VVF+E  M +      V    SD   + V  +VE V   Q   + G             
Sbjct: 702  SVVFNESVMFNDSLPTDVIPGGSDEEQQYVSVQVEHVD-DQETEIVGNDVNDTVQHSPPV 760

Query: 865  XXXXXHSIAKDRPRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDSAK 695
                   IA  R +R    P  L    D V +A   A+++E+  +P  Y EA+   D  K
Sbjct: 761  LQPQDEPIAHRRTKRSCGAPVRLIEECDMVYYAFSCAEQVENTLEPATYTEAVVSGDREK 820

Query: 694  WLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKGYS 515
            W+ AMQEE++SL KN TWEL   P+ KK V CKW++K+KEG+   E  R+KARLVAKG+S
Sbjct: 821  WISAMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFS 880

Query: 514  QVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPEGF 335
            Q+ GVD+ND+FSPVVKH+SIR   ++VAMHDLELEQLDVKTAFLHGELEE IYM QPEGF
Sbjct: 881  QIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGF 940

Query: 334  EVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSFIY 155
             V GKED+VC LKRSLYGLKQSPRQWYKRFD FM SHG+ RS++DSCVY  K  +GS IY
Sbjct: 941  IVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIY 999

Query: 154  LLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            LLLYVDD+LI AK K  I  LK +LS EF+MKDLGAAKKILGMEI RD+
Sbjct: 1000 LLLYVDDILIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDK 1048


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  428 bits (1101), Expect = e-117
 Identities = 223/397 (56%), Positives = 279/397 (70%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1171 PAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISRDVVFDEMAMLHPKK 992
            P+Y       +EPR+ K IFLGYP GVKGY++W P+ K  KVVISR+VVF E  +LH K 
Sbjct: 407  PSYAIDKKTPIEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKP 464

Query: 991  ELVVSDSVPKQVEFRVEEVSTS------QNGSVSGPFXXXXXXXXXXXXXXXXHSIAKDR 830
               V     ++   +VE + +S      ++ +++                    SIAKD+
Sbjct: 465  STNVPVESQEKTSVQVEHLISSGHAPEKEDVAINQDAPVIQDSDSSIVHQSPKRSIAKDK 524

Query: 829  PRREIKKPSSL---ADYVTFACVAAQEIESPSDPCNYHEAISCEDSAKWLIAMQEEVESL 659
            P+R IK P      A+ V +A   A+EIE  ++P  Y EAI  +D  +W+  M +E+ESL
Sbjct: 525  PKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESL 584

Query: 658  HKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDARYKARLVAKGYSQVQGVDFNDIFS 479
             KNHTWEL   P+ KK + CKW++K+KEG+   ++ARYKARLVAKGYSQ+  +DFND+FS
Sbjct: 585  EKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFS 644

Query: 478  PVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELEETIYMQQPEGFEVEGKEDHVCLL 299
            P+VKH+SIR LL++VAMHD ELEQ+DVKTAFLHGELEE IYM+QPEGF V GKE+ VC L
Sbjct: 645  PIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRL 704

Query: 298  KRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSFIYLLLYVDDMLIVA 119
            K+SLYGLKQSPRQWYKRFD FM S  + RS YD+CVY  K+ DGS IYLLLYVDDMLI A
Sbjct: 705  KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYL-KVVDGSAIYLLLYVDDMLIAA 763

Query: 118  KKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            K KS+I +LKA+LS EFEMKDLGAAKKILGMEI R+R
Sbjct: 764  KDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRER 800


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  427 bits (1099), Expect = e-117
 Identities = 227/421 (53%), Positives = 279/421 (66%), Gaps = 19/421 (4%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PA+Y  LKVFGC AY HV++GKLEPR+ K +FLGY  GVKGY++W  +P++ K  +SR
Sbjct: 643  GMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW--NPETGKTFMSR 700

Query: 1033 DVVFDEMAMLH--------PKKELV--------VSDSVPKQVEFRVEEVSTSQNGSVSGP 902
             VVF+E  M          P+KEL         V D    QVE  V E     N      
Sbjct: 701  SVVFNESVMFTNSLPSEHVPEKELQRMHMQVEHVDDDTGVQVE-PVHEQDDHNNDVADDD 759

Query: 901  FXXXXXXXXXXXXXXXXHSIAKDRPRREIKKPSSLADYVT---FACVAAQEIESPSDPCN 731
                               IA+ + +R  K P  L +      +A   A+++E+  +P  
Sbjct: 760  AHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPAT 819

Query: 730  YHEAISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDA 551
            Y EA+ C DS  W+ AM EE++SL KN TWE+   P+ KK + CKW++K+KEG+   E  
Sbjct: 820  YKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPP 879

Query: 550  RYKARLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGEL 371
            +YKARLVA+GYSQ+ GVD+ND+FSPVVKH+SIR  L++VA HDLELEQLDVKTAFLHGEL
Sbjct: 880  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 939

Query: 370  EETIYMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCV 191
            EE IYM QPEGF V GKE +VC LKRSLYGLKQSPRQW KRFD FM SH + RS+YDSCV
Sbjct: 940  EEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCV 999

Query: 190  YFRKLEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERD 11
            Y + + +GS IYLLLYVDDMLI AK K +I +LK  LS EF+MKDLG+AKKILGMEI RD
Sbjct: 1000 YIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRD 1058

Query: 10   R 8
            R
Sbjct: 1059 R 1059


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  427 bits (1099), Expect = e-117
 Identities = 227/421 (53%), Positives = 279/421 (66%), Gaps = 19/421 (4%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PA+Y  LKVFGC AY HV++GKLEPR+ K +FLGY  GVKGY++W  +P++ K  +SR
Sbjct: 643  GTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW--NPETGKTFMSR 700

Query: 1033 DVVFDEMAMLH--------PKKELV--------VSDSVPKQVEFRVEEVSTSQNGSVSGP 902
             VVF+E  M          P+KEL         V D    QVE  V E     N      
Sbjct: 701  SVVFNESVMFTNSLPSEHVPEKELQRMHMQVEHVDDDTGVQVE-PVHEQDDHNNDVADDD 759

Query: 901  FXXXXXXXXXXXXXXXXHSIAKDRPRREIKKPSSLADYVT---FACVAAQEIESPSDPCN 731
                               IA+ + +R  K P  L +      +A   A+++E+  +P  
Sbjct: 760  AHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPAT 819

Query: 730  YHEAISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDA 551
            Y EA+ C DS  W+ AM EE++SL KN TWE+   P+ KK + CKW++K+KEG+   E  
Sbjct: 820  YKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPP 879

Query: 550  RYKARLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGEL 371
            +YKARLVA+GYSQ+ GVD+ND+FSPVVKH+SIR  L++VA HDLELEQLDVKTAFLHGEL
Sbjct: 880  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 939

Query: 370  EETIYMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCV 191
            EE IYM QPEGF V GKE +VC LKRSLYGLKQSPRQW KRFD FM SH + RS+YDSCV
Sbjct: 940  EEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCV 999

Query: 190  YFRKLEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERD 11
            Y + + +GS IYLLLYVDDMLI AK K +I +LK  LS EF+MKDLG+AKKILGMEI RD
Sbjct: 1000 YIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRD 1058

Query: 10   R 8
            R
Sbjct: 1059 R 1059


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  427 bits (1099), Expect = e-117
 Identities = 223/422 (52%), Positives = 284/422 (67%), Gaps = 18/422 (4%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            GKPANY +L+VFGCPAY+H+N GKLE R+ KG+F+GYP GVKGY++W  D    K ++SR
Sbjct: 641  GKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKD--QGKCIVSR 698

Query: 1033 DVVFDEMAMLHPKKELVV-------------SDSVPKQVEFRVEEVSTSQNGSV---SGP 902
            DVVF E  +L    E                S++    VE   ++ S  +  S    +  
Sbjct: 699  DVVFHESVLLKESAEHDAGLQDNPAANKRSGSETSKVNVELLTDKSSEKEAASDDERATA 758

Query: 901  FXXXXXXXXXXXXXXXXHSIAKDRPRREIKKPS--SLADYVTFACVAAQEIESPSDPCNY 728
                             + +A+DR RRE++ P     AD + +A + A E+ +  +P N+
Sbjct: 759  ESEEHEVSELPQADLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEV-TIEEPANF 817

Query: 727  HEAISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDAR 548
             EA+      KWL AMQ+E+ESL +N TW L   P  K+++ CKW++K+ EGIP VE  +
Sbjct: 818  SEAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPK 877

Query: 547  YKARLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGELE 368
            YKARLVA+G++Q +GVDFN+IFSPVVKH+SIR+LLA+VA+ DLELEQ+DVKTAFLHG LE
Sbjct: 878  YKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLE 937

Query: 367  ETIYMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCVY 188
            E I M QPEGFE + KED+VCLL +SLYGLKQSPRQWY+RFD FM S GY RS+YDSCVY
Sbjct: 938  EQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVY 997

Query: 187  FRKLEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDR 8
            F   + G   YLLLYVDDMLI +K KS+I RLK  L  EFEMKDLG AK+ILGM+I RDR
Sbjct: 998  FGGSDQGGVAYLLLYVDDMLIASKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDR 1057

Query: 7    FA 2
             A
Sbjct: 1058 SA 1059


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  426 bits (1096), Expect = e-116
 Identities = 227/421 (53%), Positives = 280/421 (66%), Gaps = 19/421 (4%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PA+Y  LKVFGC AY HV++GKLEPR+ K +FLGY  GVKGY++W  +P++ K  +SR
Sbjct: 645  GTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW--NPETGKTFMSR 702

Query: 1033 DVVFDEMAMLH--------PKKELV--------VSDSVPKQVEFRVEEVSTSQNGSVSGP 902
             VVF+E  M          P+KEL         V D    QVE  V+E     N      
Sbjct: 703  SVVFNESVMFTNSLPSEHVPEKELQRMHMQVEHVDDDTGVQVE-PVDEQDDHNNDVADDD 761

Query: 901  FXXXXXXXXXXXXXXXXHSIAKDRPRREIKKPSSLADYVT---FACVAAQEIESPSDPCN 731
                              SIA+ + +R  K P  L +      +A   A+++E+  +P  
Sbjct: 762  AHDDVQQTPPILQLEEDLSIAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPAT 821

Query: 730  YHEAISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDA 551
            Y EA+ C DS  W+ AM EE++SL KN TWE+   P+ KK + CKW++K+KE +   E  
Sbjct: 822  YKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEALSLSEPP 881

Query: 550  RYKARLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGEL 371
            +YKARLVA+GYSQ+ GVD+ND+FSPVVKH+SIR  L++VA HDLELEQLDVKTAFLHGEL
Sbjct: 882  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 941

Query: 370  EETIYMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCV 191
            EE IYM QPEGF V GKE +VC LKRSLYGLKQSPRQW KRFD FM SH + RS+YDSCV
Sbjct: 942  EEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCV 1001

Query: 190  YFRKLEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERD 11
            Y + + +GS IYLLLYVDDMLI AK K +I +LK  LS EF+MKDLG+AKKILGMEI RD
Sbjct: 1002 YIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRD 1060

Query: 10   R 8
            R
Sbjct: 1061 R 1061


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  423 bits (1088), Expect = e-115
 Identities = 226/421 (53%), Positives = 278/421 (66%), Gaps = 19/421 (4%)
 Frame = -2

Query: 1213 GKPANYLDLKVFGCPAYVHVNDGKLEPRSKKGIFLGYPQGVKGYRVWLPDPKSSKVVISR 1034
            G PA+Y  LKVFGC AY HV++GKLEPR+ K +FLGY  GVKGY++W  +P++ K  +SR
Sbjct: 643  GTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW--NPETGKTFMSR 700

Query: 1033 DVVFDEMAMLH--------PKKELV--------VSDSVPKQVEFRVEEVSTSQNGSVSGP 902
             VVF+E  M          P+KEL         V D    QVE  V E     N      
Sbjct: 701  SVVFNESVMFTNSLPSEHVPEKELQRMHMQVEHVDDYTGVQVE-PVHEQDDHNNDVADDD 759

Query: 901  FXXXXXXXXXXXXXXXXHSIAKDRPRREIKKPSSLADYVT---FACVAAQEIESPSDPCN 731
                               IA+ + +R  K P  L +      +A   A+++E+  +P  
Sbjct: 760  AHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPAT 819

Query: 730  YHEAISCEDSAKWLIAMQEEVESLHKNHTWELALPPEGKKIVGCKWVYKKKEGIPGVEDA 551
            Y EA+ C DS  W+ AM EE++SL KN TWE+   P+ KK + CKW++K+KEG+   E  
Sbjct: 820  YKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPP 879

Query: 550  RYKARLVAKGYSQVQGVDFNDIFSPVVKHTSIRVLLALVAMHDLELEQLDVKTAFLHGEL 371
            +YKARLVA+GYSQ+ GVD+ND+FSPVVKH+SIR  L++VA HDLELEQLDVKTAFLHGEL
Sbjct: 880  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 939

Query: 370  EETIYMQQPEGFEVEGKEDHVCLLKRSLYGLKQSPRQWYKRFDGFMFSHGYSRSQYDSCV 191
            EE IYM QPEGF V GKE +VC LKRSLYGLKQSPRQW KRFD FM SH + RS+YDSCV
Sbjct: 940  EEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCV 999

Query: 190  YFRKLEDGSFIYLLLYVDDMLIVAKKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERD 11
            Y + + +GS IYLLLYVDDMLI AK K +I +LK  LS EF+MKDLG+AKKIL MEI RD
Sbjct: 1000 YIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRD 1058

Query: 10   R 8
            R
Sbjct: 1059 R 1059