BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00011793
         (1161 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010108344.1| DNA-directed RNA polymerase III subunit RPC3...   416   e-113
ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III s...   392   e-106
ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s...   392   e-106
ref|XP_008234239.1| PREDICTED: DNA-directed RNA polymerase III s...   387   e-105
gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gos...   386   e-104
ref|XP_012484104.1| PREDICTED: DNA-directed RNA polymerase III s...   385   e-104
gb|KJB34121.1| hypothetical protein B456_006G048800 [Gossypium r...   385   e-104
gb|KJB34120.1| hypothetical protein B456_006G048800 [Gossypium r...   385   e-104
ref|XP_012484103.1| PREDICTED: DNA-directed RNA polymerase III s...   385   e-104
ref|XP_008234241.1| PREDICTED: DNA-directed RNA polymerase III s...   382   e-103
ref|XP_008234238.1| PREDICTED: DNA-directed RNA polymerase III s...   382   e-103
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   380   e-102
ref|XP_009342965.1| PREDICTED: DNA-directed RNA polymerase III s...   379   e-102
ref|XP_008376589.1| PREDICTED: DNA-directed RNA polymerase III s...   372   e-100
ref|XP_012090252.1| PREDICTED: uncharacterized protein LOC105648...   366   2e-98
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...   363   2e-97
ref|XP_009340033.1| PREDICTED: DNA-directed RNA polymerase III s...   361   6e-97
ref|XP_008377566.1| PREDICTED: DNA-directed RNA polymerase III s...   361   7e-97
ref|XP_007038705.1| RNA polymerase III subunit RPC82 family prot...   358   5e-96
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   357   8e-96

>ref|XP_010108344.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
           gi|587932063|gb|EXC19135.1| DNA-directed RNA polymerase
           III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  416 bits (1068), Expect = e-113
 Identities = 222/329 (67%), Positives = 261/329 (79%), Gaps = 1/329 (0%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           M TPYGIKFAVH++TSHFGNLVA VCENLL++GPLTLQQL+RFTELT +Q+KNSLLILIQ
Sbjct: 1   MATPYGIKFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQ 60

Query: 806 HNCVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLL 627
           HNCVQ FS+EQ     N    TQYL LFDNILHRLRFPKFLE+VS+ELDK+C ++LEGLL
Sbjct: 61  HNCVQPFSSEQIGAGGNEVKVTQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGLL 120

Query: 626 QHGRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAKK 447
           QHGRLT EQ+YERA+   + VQ+  RESFQKL+ +RF+E+CPAPEPFV EPS  ++ + K
Sbjct: 121 QHGRLTLEQIYERARD--NAVQDAVRESFQKLLNSRFVERCPAPEPFV-EPSTIKS-SNK 176

Query: 446 RGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSK-DSSPIMHAGEKR 270
           RGAKSAK+ EV +T EQRVL AAA ++ LRFSI+T    E D +    DSS  M  GEKR
Sbjct: 177 RGAKSAKLDEVSETEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSMGVGEKR 236

Query: 269 KSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKAT 90
           K    + D  F S+  EV LWRANFEEF R LRHKAC+ENVR RLD GAA VL+A+L AT
Sbjct: 237 KHGAADSDDAFGSNENEVILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAMLDAT 296

Query: 89  RAAENKVKMENSASLSLNSIFEEVMKSEA 3
           R+AE KVK ENS SLS+++IFEEVMKSEA
Sbjct: 297 RSAEKKVKTENSVSLSMDTIFEEVMKSEA 325


>ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
           [Vitis vinifera]
          Length = 429

 Score =  392 bits (1006), Expect = e-106
 Identities = 203/333 (60%), Positives = 256/333 (76%), Gaps = 5/333 (1%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           M T YG++ AVH+++SHFGNLVAKVC+ LL++G LTL  ++RFTEL   QVK+ +L+LIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF+ +Q        ++ TQY+ALF NILHR+RF KFL +VS+ELDK+CE++LEGL
Sbjct: 61  HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 629 LQHGRLTQEQMYERAKSFKSG----VQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDE 462
           LQHGRLT EQ+ +RAKS +S     VQ+  RESF KLV A F+E+CPA EPF+A PS +E
Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 180

Query: 461 TPAKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHA 282
           TPA+KRGAKSAK+VE  +T+EQR + AAAPM+A RFS++ N      T    D SP + A
Sbjct: 181 TPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIIN------TGTDVDDSPNVTA 234

Query: 281 GEKRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRAL 102
           GEKRK D LELD E  +  ++  LWRANFEEF+RCLRHKAC+ NV+ RLDDGAAIVL A+
Sbjct: 235 GEKRKQDALELDKETGASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAM 294

Query: 101 LKATRAAENKVKMENSASLSLNSIFEEVMKSEA 3
           L+ATR+ E KVK ENS  LS+++IFE VMKSEA
Sbjct: 295 LEATRSEEKKVKTENSVPLSMDTIFEGVMKSEA 327


>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
           [Vitis vinifera] gi|302143859|emb|CBI22720.3| unnamed
           protein product [Vitis vinifera]
          Length = 524

 Score =  392 bits (1006), Expect = e-106
 Identities = 203/333 (60%), Positives = 256/333 (76%), Gaps = 5/333 (1%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           M T YG++ AVH+++SHFGNLVAKVC+ LL++G LTL  ++RFTEL   QVK+ +L+LIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF+ +Q        ++ TQY+ALF NILHR+RF KFL +VS+ELDK+CE++LEGL
Sbjct: 61  HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 629 LQHGRLTQEQMYERAKSFKSG----VQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDE 462
           LQHGRLT EQ+ +RAKS +S     VQ+  RESF KLV A F+E+CPA EPF+A PS +E
Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 180

Query: 461 TPAKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHA 282
           TPA+KRGAKSAK+VE  +T+EQR + AAAPM+A RFS++ N      T    D SP + A
Sbjct: 181 TPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIIN------TGTDVDDSPNVTA 234

Query: 281 GEKRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRAL 102
           GEKRK D LELD E  +  ++  LWRANFEEF+RCLRHKAC+ NV+ RLDDGAAIVL A+
Sbjct: 235 GEKRKQDALELDKETGASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAM 294

Query: 101 LKATRAAENKVKMENSASLSLNSIFEEVMKSEA 3
           L+ATR+ E KVK ENS  LS+++IFE VMKSEA
Sbjct: 295 LEATRSEEKKVKTENSVPLSMDTIFEGVMKSEA 327


>ref|XP_008234239.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
           [Prunus mume]
          Length = 522

 Score =  387 bits (995), Expect = e-105
 Identities = 211/327 (64%), Positives = 252/327 (77%)
 Frame = -2

Query: 983 VTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQH 804
           +T YGIK+AVHI+TS+FGNLVAKVCE+LL+R  L+L+QL+ FTELT  QVKNSLLILIQH
Sbjct: 3   LTQYGIKYAVHIITSNFGNLVAKVCESLLRRRHLSLKQLIGFTELTPQQVKNSLLILIQH 62

Query: 803 NCVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQ 624
           NCVQ FS +Q +    G   TQY+ALFDNI+HR RF KFL +VSQELD D E +L+ LL+
Sbjct: 63  NCVQPFSFDQSE----GPKVTQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLE 118

Query: 623 HGRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAKKR 444
           +GRLT +Q+ E A+S KS  ++   ESF KLV A F+E+CPAPEP + + +  E PAKKR
Sbjct: 119 NGRLTLKQIIEGAESSKSQGKDSVLESFLKLVNAHFVERCPAPEPVLEQATKQEGPAKKR 178

Query: 443 GAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKRKS 264
           GAKSAK+VEV +T+EQRV+ AAAP EA+RFSIM + EA    +     S  M  GEKRK 
Sbjct: 179 GAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEA----DACGGKSDNMSVGEKRKH 234

Query: 263 DTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKATRA 84
            TLE D EF S + EV LWRANFEEFIRCLRHKACVENVR RLDD AA+VLRA+LKATR 
Sbjct: 235 ATLEFDAEFGSKD-EVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRT 293

Query: 83  AENKVKMENSASLSLNSIFEEVMKSEA 3
           AE KVK ENS  LSLN+I+EEV+ SEA
Sbjct: 294 AEKKVKTENSVPLSLNTIYEEVINSEA 320


>gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gossypium arboreum]
          Length = 513

 Score =  386 bits (991), Expect = e-104
 Identities = 201/328 (61%), Positives = 251/328 (76%), Gaps = 1/328 (0%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           MVT YGIK+AV+++T+HFG+LVAKVCE LL++GPLTLQ +VR TELTS QVKNSLL+LIQ
Sbjct: 1   MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF  +Q  +  +G +  TQY+ALFDNI+ R RFPKFL MVS++LDK C +LLEGL
Sbjct: 61  HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120

Query: 629 LQHGRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAK 450
           LQHGRL+ +QM++RAKS    VQ    E+F KL+ A FIE+CPA EP +  P+ +E  A+
Sbjct: 121 LQHGRLSLKQMFDRAKSGDDVVQ----EAFVKLLNAHFIERCPASEPVLTNPTKEEEAAR 176

Query: 449 KRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKR 270
           KR AKS K++EV++TLEQRV+EAA P EALRF   T  E   D    K +S  +  GEKR
Sbjct: 177 KRAAKSGKILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNSSSVTPGEKR 236

Query: 269 KSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKAT 90
           K D LE + E  + +++V LWRANF+EFI CLRHKAC+ENVR R DDGA IV  A+L+AT
Sbjct: 237 KHDALESEAECGATDEQVVLWRANFDEFIWCLRHKACIENVRARFDDGAVIVFGAMLEAT 296

Query: 89  RAAENKVKMENSASLSLNSIFEEVMKSE 6
           R+AE KVK ENS  LSL+SI+EEV+KSE
Sbjct: 297 RSAEKKVKTENSVPLSLSSIYEEVIKSE 324


>ref|XP_012484104.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
           [Gossypium raimondii]
          Length = 417

 Score =  385 bits (990), Expect = e-104
 Identities = 199/328 (60%), Positives = 251/328 (76%), Gaps = 1/328 (0%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           MVT YGIK+AV+++T+HFG+LVAKVCE LL+RGPLTLQ +VR TELTS QVKNSLL+LIQ
Sbjct: 1   MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF  +Q  +  +G +  TQY+ALFDNI+ R RFPKFL MVS++LDK C +LLEGL
Sbjct: 61  HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120

Query: 629 LQHGRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAK 450
           LQHGRLT +QM++RAKS ++   +  +E+F KL+ A FIE+CPA EP +  P+ +E  A+
Sbjct: 121 LQHGRLTLKQMFDRAKSGQNEGDDVVQEAFVKLLNAHFIERCPASEPVLTNPTKEEEAAR 180

Query: 449 KRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKR 270
           KR AKS K++EV++TLEQRV+EAA P EALRF   T  E   D    K +S  +  GEKR
Sbjct: 181 KRAAKSGKILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNSSSVTPGEKR 240

Query: 269 KSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKAT 90
           K D +E + E    +++V LWRAN +EFIR LRHKAC+ENVR R DDGA IV  A+L+AT
Sbjct: 241 KHDAIESEAESGDTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAVIVFGAMLEAT 300

Query: 89  RAAENKVKMENSASLSLNSIFEEVMKSE 6
           R+AE KVK ENS  LSL+SI+EEV+KSE
Sbjct: 301 RSAEKKVKTENSVPLSLSSIYEEVIKSE 328


>gb|KJB34121.1| hypothetical protein B456_006G048800 [Gossypium raimondii]
          Length = 408

 Score =  385 bits (990), Expect = e-104
 Identities = 199/328 (60%), Positives = 251/328 (76%), Gaps = 1/328 (0%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           MVT YGIK+AV+++T+HFG+LVAKVCE LL+RGPLTLQ +VR TELTS QVKNSLL+LIQ
Sbjct: 1   MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF  +Q  +  +G +  TQY+ALFDNI+ R RFPKFL MVS++LDK C +LLEGL
Sbjct: 61  HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120

Query: 629 LQHGRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAK 450
           LQHGRLT +QM++RAKS ++   +  +E+F KL+ A FIE+CPA EP +  P+ +E  A+
Sbjct: 121 LQHGRLTLKQMFDRAKSGQNEGDDVVQEAFVKLLNAHFIERCPASEPVLTNPTKEEEAAR 180

Query: 449 KRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKR 270
           KR AKS K++EV++TLEQRV+EAA P EALRF   T  E   D    K +S  +  GEKR
Sbjct: 181 KRAAKSGKILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNSSSVTPGEKR 240

Query: 269 KSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKAT 90
           K D +E + E    +++V LWRAN +EFIR LRHKAC+ENVR R DDGA IV  A+L+AT
Sbjct: 241 KHDAIESEAESGDTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAVIVFGAMLEAT 300

Query: 89  RAAENKVKMENSASLSLNSIFEEVMKSE 6
           R+AE KVK ENS  LSL+SI+EEV+KSE
Sbjct: 301 RSAEKKVKTENSVPLSLSSIYEEVIKSE 328


>gb|KJB34120.1| hypothetical protein B456_006G048800 [Gossypium raimondii]
          Length = 415

 Score =  385 bits (990), Expect = e-104
 Identities = 199/328 (60%), Positives = 251/328 (76%), Gaps = 1/328 (0%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           MVT YGIK+AV+++T+HFG+LVAKVCE LL+RGPLTLQ +VR TELTS QVKNSLL+LIQ
Sbjct: 1   MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF  +Q  +  +G +  TQY+ALFDNI+ R RFPKFL MVS++LDK C +LLEGL
Sbjct: 61  HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120

Query: 629 LQHGRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAK 450
           LQHGRLT +QM++RAKS ++   +  +E+F KL+ A FIE+CPA EP +  P+ +E  A+
Sbjct: 121 LQHGRLTLKQMFDRAKSGQNEGDDVVQEAFVKLLNAHFIERCPASEPVLTNPTKEEEAAR 180

Query: 449 KRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKR 270
           KR AKS K++EV++TLEQRV+EAA P EALRF   T  E   D    K +S  +  GEKR
Sbjct: 181 KRAAKSGKILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNSSSVTPGEKR 240

Query: 269 KSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKAT 90
           K D +E + E    +++V LWRAN +EFIR LRHKAC+ENVR R DDGA IV  A+L+AT
Sbjct: 241 KHDAIESEAESGDTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAVIVFGAMLEAT 300

Query: 89  RAAENKVKMENSASLSLNSIFEEVMKSE 6
           R+AE KVK ENS  LSL+SI+EEV+KSE
Sbjct: 301 RSAEKKVKTENSVPLSLSSIYEEVIKSE 328


>ref|XP_012484103.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
           [Gossypium raimondii] gi|763766904|gb|KJB34119.1|
           hypothetical protein B456_006G048800 [Gossypium
           raimondii]
          Length = 517

 Score =  385 bits (990), Expect = e-104
 Identities = 199/328 (60%), Positives = 251/328 (76%), Gaps = 1/328 (0%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           MVT YGIK+AV+++T+HFG+LVAKVCE LL+RGPLTLQ +VR TELTS QVKNSLL+LIQ
Sbjct: 1   MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF  +Q  +  +G +  TQY+ALFDNI+ R RFPKFL MVS++LDK C +LLEGL
Sbjct: 61  HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120

Query: 629 LQHGRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAK 450
           LQHGRLT +QM++RAKS ++   +  +E+F KL+ A FIE+CPA EP +  P+ +E  A+
Sbjct: 121 LQHGRLTLKQMFDRAKSGQNEGDDVVQEAFVKLLNAHFIERCPASEPVLTNPTKEEEAAR 180

Query: 449 KRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKR 270
           KR AKS K++EV++TLEQRV+EAA P EALRF   T  E   D    K +S  +  GEKR
Sbjct: 181 KRAAKSGKILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNSSSVTPGEKR 240

Query: 269 KSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKAT 90
           K D +E + E    +++V LWRAN +EFIR LRHKAC+ENVR R DDGA IV  A+L+AT
Sbjct: 241 KHDAIESEAESGDTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAVIVFGAMLEAT 300

Query: 89  RAAENKVKMENSASLSLNSIFEEVMKSE 6
           R+AE KVK ENS  LSL+SI+EEV+KSE
Sbjct: 301 RSAEKKVKTENSVPLSLSSIYEEVIKSE 328


>ref|XP_008234241.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X4
           [Prunus mume]
          Length = 431

 Score =  382 bits (982), Expect = e-103
 Identities = 211/331 (63%), Positives = 252/331 (76%), Gaps = 4/331 (1%)
 Frame = -2

Query: 983 VTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQH 804
           +T YGIK+AVHI+TS+FGNLVAKVCE+LL+R  L+L+QL+ FTELT  QVKNSLLILIQH
Sbjct: 3   LTQYGIKYAVHIITSNFGNLVAKVCESLLRRRHLSLKQLIGFTELTPQQVKNSLLILIQH 62

Query: 803 NCVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQ 624
           NCVQ FS +Q +    G   TQY+ALFDNI+HR RF KFL +VSQELD D E +L+ LL+
Sbjct: 63  NCVQPFSFDQSE----GPKVTQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLE 118

Query: 623 HGRLTQEQMYERAKSFKS----GVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETP 456
           +GRLT +Q+ E A+S KS      ++   ESF KLV A F+E+CPAPEP + + +  E P
Sbjct: 119 NGRLTLKQIIEGAESSKSQGDSAGKDSVLESFLKLVNAHFVERCPAPEPVLEQATKQEGP 178

Query: 455 AKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGE 276
           AKKRGAKSAK+VEV +T+EQRV+ AAAP EA+RFSIM + EA+         S  M  GE
Sbjct: 179 AKKRGAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEAD----ACGGKSDNMSVGE 234

Query: 275 KRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLK 96
           KRK  TLE D EF S + EV LWRANFEEFIRCLRHKACVENVR RLDD AA+VLRA+LK
Sbjct: 235 KRKHATLEFDAEFGSKD-EVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLK 293

Query: 95  ATRAAENKVKMENSASLSLNSIFEEVMKSEA 3
           ATR AE KVK ENS  LSLN+I+EEV+ SEA
Sbjct: 294 ATRTAEKKVKTENSVPLSLNTIYEEVINSEA 324


>ref|XP_008234238.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
           [Prunus mume]
          Length = 526

 Score =  382 bits (982), Expect = e-103
 Identities = 211/331 (63%), Positives = 252/331 (76%), Gaps = 4/331 (1%)
 Frame = -2

Query: 983 VTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQH 804
           +T YGIK+AVHI+TS+FGNLVAKVCE+LL+R  L+L+QL+ FTELT  QVKNSLLILIQH
Sbjct: 3   LTQYGIKYAVHIITSNFGNLVAKVCESLLRRRHLSLKQLIGFTELTPQQVKNSLLILIQH 62

Query: 803 NCVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQ 624
           NCVQ FS +Q +    G   TQY+ALFDNI+HR RF KFL +VSQELD D E +L+ LL+
Sbjct: 63  NCVQPFSFDQSE----GPKVTQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLE 118

Query: 623 HGRLTQEQMYERAKSFKS----GVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETP 456
           +GRLT +Q+ E A+S KS      ++   ESF KLV A F+E+CPAPEP + + +  E P
Sbjct: 119 NGRLTLKQIIEGAESSKSQGDSAGKDSVLESFLKLVNAHFVERCPAPEPVLEQATKQEGP 178

Query: 455 AKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGE 276
           AKKRGAKSAK+VEV +T+EQRV+ AAAP EA+RFSIM + EA+         S  M  GE
Sbjct: 179 AKKRGAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEAD----ACGGKSDNMSVGE 234

Query: 275 KRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLK 96
           KRK  TLE D EF S + EV LWRANFEEFIRCLRHKACVENVR RLDD AA+VLRA+LK
Sbjct: 235 KRKHATLEFDAEFGSKD-EVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLK 293

Query: 95  ATRAAENKVKMENSASLSLNSIFEEVMKSEA 3
           ATR AE KVK ENS  LSLN+I+EEV+ SEA
Sbjct: 294 ATRTAEKKVKTENSVPLSLNTIYEEVINSEA 324


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
           [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
           polymerase III subunit RPC82 family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 523

 Score =  380 bits (976), Expect = e-102
 Identities = 199/332 (59%), Positives = 257/332 (77%), Gaps = 5/332 (1%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           MVT +GIK+AV ++T+HFG+LVAKVCE LL++GPLTLQ +VRFTELTS QVKNSLL+LIQ
Sbjct: 1   MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF  EQP    +G ++++QY+ALF+NI+HR RFPKFL +VSQ+LDK C +L+E L
Sbjct: 61  HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 629 LQHGRLTQEQMYERAKSFKSG----VQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDE 462
           L HGRLT +QM +RAKS ++     + +  RE+F KL+ A F+E+CPA EP + +P+ +E
Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEE 180

Query: 461 TPAKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHA 282
           T A+KR  KSAK++E ++TLEQRVLEAA P EALRF ++T  E   D    +++S  M  
Sbjct: 181 TSARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSMTV 240

Query: 281 GEKRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRAL 102
           G+KRK D LE + E  + +++V LWRANFEEFIR LRHKA +ENVR  LDDGA IV+ A+
Sbjct: 241 GKKRKLDALESETEGEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVISAM 300

Query: 101 LKATRAAENKVKMENSASLSLNSIFEEVMKSE 6
           L+ATR AE KVK ENS  LSLNSI+EEV+KSE
Sbjct: 301 LEATRTAEKKVKTENSVPLSLNSIYEEVIKSE 332


>ref|XP_009342965.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Pyrus
           x bretschneideri] gi|694431042|ref|XP_009342966.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC3-like [Pyrus x bretschneideri]
          Length = 509

 Score =  379 bits (974), Expect = e-102
 Identities = 203/326 (62%), Positives = 249/326 (76%)
 Frame = -2

Query: 980 TPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQHN 801
           T +G+K+AVHI+TSHFGNLVA VCENLLKRGPLTL+ L+ FTELT  QVKNSLLILIQHN
Sbjct: 4   THFGVKYAVHIITSHFGNLVANVCENLLKRGPLTLRLLIGFTELTPQQVKNSLLILIQHN 63

Query: 800 CVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQH 621
           CVQ FS +Q +    G   TQY+ALFDNILHR RF KF+ +VSQE DK+CE +++ LL++
Sbjct: 64  CVQPFSVDQAE----GPKVTQYVALFDNILHRWRFAKFMTVVSQEFDKECELIIKDLLEN 119

Query: 620 GRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAKKRG 441
           GRLT +Q+ E   + K  V+    +SF KLV A F+E+CPAPE  + E S D    KKRG
Sbjct: 120 GRLTLKQITEGEYAVKDTVE----KSFLKLVNAHFVERCPAPEAVLEEASKDAP--KKRG 173

Query: 440 AKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKRKSD 261
            KS+K+VEV +T+EQRV+ AAAP  A+RFSI+T    +++T+    SS  M  G+KRK D
Sbjct: 174 PKSSKIVEVPETIEQRVVAAAAPSAAMRFSILT----DSETDAHGGSSSSMSTGDKRKHD 229

Query: 260 TLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKATRAA 81
            LELD EFA  N EV +WRANFEEFIRCLRHKACVENVR RLDDGAA+VLRA+LK+TR A
Sbjct: 230 ALELDEEFA--NNEVVIWRANFEEFIRCLRHKACVENVRARLDDGAALVLRAMLKSTRTA 287

Query: 80  ENKVKMENSASLSLNSIFEEVMKSEA 3
           E KVKMENS  +S ++I+EEV+ SEA
Sbjct: 288 EKKVKMENSVPVSFSTIYEEVINSEA 313


>ref|XP_008376589.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Malus
           domestica]
          Length = 508

 Score =  372 bits (955), Expect = e-100
 Identities = 202/326 (61%), Positives = 247/326 (75%)
 Frame = -2

Query: 980 TPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQHN 801
           T +G+K+AVHI+TSHFGNLVAKVCENLLKRGPLTL+ L+ FTELT  QVKNSLLILIQHN
Sbjct: 4   THFGVKYAVHIITSHFGNLVAKVCENLLKRGPLTLRLLIGFTELTPQQVKNSLLILIQHN 63

Query: 800 CVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQH 621
           CVQ FS +Q +    G   TQY+AL DNILHR RF KF+ +VSQE DK+CE +++ LL++
Sbjct: 64  CVQPFSVDQAE----GPKVTQYVALIDNILHRWRFAKFMTVVSQEFDKECELIIKDLLEN 119

Query: 620 GRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAKKRG 441
           GRLT +Q+ E   + K  V+    +SF KLV A F+E+CPAPE  + E S D    KKRG
Sbjct: 120 GRLTLKQITEGEYAVKDTVE----KSFLKLVNAHFVERCPAPEAVLEEASKDAP--KKRG 173

Query: 440 AKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKRKSD 261
            KS+K+VEV +T+EQRV+  AAP  A+RFSI+T    +++T+    SS  M  G+KRK D
Sbjct: 174 PKSSKIVEVPETIEQRVVAVAAPSAAMRFSILT----DSETDAHGGSSSSMSTGDKRKHD 229

Query: 260 TLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKATRAA 81
            LELD EFA  N EV LWRANFEEFIRCLRHKACVENVR RLDDGAA+VLRA+LK+TR A
Sbjct: 230 ALELD-EFA--NNEVVLWRANFEEFIRCLRHKACVENVRARLDDGAALVLRAMLKSTRTA 286

Query: 80  ENKVKMENSASLSLNSIFEEVMKSEA 3
           E KVK ENS  +S ++I+EEV+ SEA
Sbjct: 287 EKKVKTENSVPVSFSTIYEEVINSEA 312


>ref|XP_012090252.1| PREDICTED: uncharacterized protein LOC105648465 [Jatropha curcas]
           gi|643706139|gb|KDP22271.1| hypothetical protein
           JCGZ_26102 [Jatropha curcas]
          Length = 529

 Score =  366 bits (939), Expect = 2e-98
 Identities = 187/330 (56%), Positives = 245/330 (74%), Gaps = 5/330 (1%)
 Frame = -2

Query: 980 TPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQHN 801
           T +GIK+A H++T+HFGNLV KVCE LL+RGPL LQ ++RFT +    VKNSLL+LIQHN
Sbjct: 4   TQHGIKYAAHLITNHFGNLVGKVCECLLRRGPLNLQAIIRFTGVKETSVKNSLLVLIQHN 63

Query: 800 CVQAFSAEQPDDIVNGQIH-TQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQ 624
           CVQ+F   +P  + N     TQY+A+FDNILHR+RF KFL ++SQE DK C  ++EGLLQ
Sbjct: 64  CVQSFRLIEPGGLNNEPKQITQYIAVFDNILHRMRFSKFLAIISQEFDKLCVDIVEGLLQ 123

Query: 623 HGRLTQEQMYERAKSFK---SGVQNDA-RESFQKLVTARFIEQCPAPEPFVAEPSPDETP 456
           HGRLT +Q+ +RA ++    + +  DA +ES +KLVTAR++E CP PEP +   + ++ P
Sbjct: 124 HGRLTLKQIVDRANNYNKTGNSIGLDAVQESLRKLVTARYVEHCPIPEPVLEPQNEEDAP 183

Query: 455 AKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGE 276
           AKKRGAKSAK+V   +TLEQR L AA PMEA RFS++ ++E  +D E  ++ SP  H+G+
Sbjct: 184 AKKRGAKSAKIVVEPETLEQRALAAALPMEAKRFSLVMDIELNDDGEKDQNKSPDKHSGD 243

Query: 275 KRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLK 96
           KRK D  E D +  +   EV LWRANFEEFIR LRHKACVENV+ RLDDGAAIV+ A+L+
Sbjct: 244 KRKLDASEPDIDSETTKDEVVLWRANFEEFIRRLRHKACVENVKARLDDGAAIVVSAMLE 303

Query: 95  ATRAAENKVKMENSASLSLNSIFEEVMKSE 6
           A++  E KVK  +S  LS+NSI+EEV+KSE
Sbjct: 304 ASKTEEKKVKTASSVPLSVNSIYEEVIKSE 333


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
           gi|462415465|gb|EMJ20202.1| hypothetical protein
           PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  363 bits (931), Expect = 2e-97
 Identities = 203/331 (61%), Positives = 246/331 (74%), Gaps = 4/331 (1%)
 Frame = -2

Query: 983 VTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQH 804
           +T YGIK+AVHI+TS+FGNLVAKVCE LL+RG L+L+QL+ FTELT  QVKNSLLILIQH
Sbjct: 3   LTQYGIKYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQH 62

Query: 803 NCVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQ 624
           NCVQ FS +Q +    G   TQY+ALFDNI+HR RF KFL +VSQELD D E +L+ LL+
Sbjct: 63  NCVQPFSFDQSE----GPKVTQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLE 118

Query: 623 HGRLTQEQMYERAKSFKS----GVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETP 456
           +GRLT +Q+ E A+S KS      ++  +ESF KLV A F+E+CPAPEP + + +  E P
Sbjct: 119 NGRLTLKQIIEGAESSKSQGDSADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEGP 178

Query: 455 AKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGE 276
           AKKRGAKSAK+VEV +T+EQRV+ AAAP EA+RFSIM + EA+     S +    M  GE
Sbjct: 179 AKKRGAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEADAPGGKSDN----MSVGE 234

Query: 275 KRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLK 96
           K     + +         EV LWRANFEEFIRCLRHKACVENVR RLDD AA+VLRA+LK
Sbjct: 235 KVG---IGIVISIYQGYDEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLK 291

Query: 95  ATRAAENKVKMENSASLSLNSIFEEVMKSEA 3
           ATR AE KVK ENS  LSLN+I+EEV+ SEA
Sbjct: 292 ATRTAEKKVKTENSVPLSLNTIYEEVINSEA 322


>ref|XP_009340033.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Pyrus
           x bretschneideri]
          Length = 506

 Score =  361 bits (927), Expect = 6e-97
 Identities = 196/326 (60%), Positives = 244/326 (74%)
 Frame = -2

Query: 980 TPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQHN 801
           T +G+K+AVHI+TSHFGNLVAKVCE+LLKRGPL L+ L+ FTELT  QVKNSLLILIQHN
Sbjct: 4   THFGVKYAVHIITSHFGNLVAKVCESLLKRGPLNLKILIGFTELTPQQVKNSLLILIQHN 63

Query: 800 CVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQH 621
           CVQ FS +Q +    G   TQY+ALFDNILHR RF KF+ +VSQE DK+CE +++ LL++
Sbjct: 64  CVQPFSVDQAE----GPKFTQYVALFDNILHRGRFSKFMTVVSQEFDKECELIIKDLLEN 119

Query: 620 GRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAKKRG 441
           GRLT +Q+ E   + K  V+    +SF KLV ARF+E+CPAPE  + E S D    KK G
Sbjct: 120 GRLTLKQITEGEYAVKDTVE----KSFLKLVDARFVERCPAPEAVLEEASKDAP--KKGG 173

Query: 440 AKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKRKSD 261
            K +K+VEV +T+EQRV+ AAAP  A+RFSI+T    +++T+    S   M  G+KRK D
Sbjct: 174 PKFSKIVEVPETIEQRVVAAAAPSGAMRFSILT----DSETDAHGGS---MSTGDKRKHD 226

Query: 260 TLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKATRAA 81
            LELD EFA  N E+ LWR NFEEFIRCLRHK C+ENVR RLDDGAA+VLRA+LK+TR A
Sbjct: 227 ALELDEEFA--NNEMVLWRVNFEEFIRCLRHKVCIENVRARLDDGAALVLRAMLKSTRTA 284

Query: 80  ENKVKMENSASLSLNSIFEEVMKSEA 3
           E KVK ENS  +S ++I+EEV+ SEA
Sbjct: 285 EKKVKTENSVPVSFSTIYEEVINSEA 310


>ref|XP_008377566.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           isoform X2 [Malus domestica]
          Length = 506

 Score =  361 bits (926), Expect = 7e-97
 Identities = 198/326 (60%), Positives = 244/326 (74%)
 Frame = -2

Query: 980 TPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQHN 801
           T +G+K+AVHI+TSHFGNLVAKVCE+LLKRGPLTL+ L+ FTELT  QVKNSLLILIQHN
Sbjct: 4   THFGVKYAVHIITSHFGNLVAKVCESLLKRGPLTLKILIGFTELTPQQVKNSLLILIQHN 63

Query: 800 CVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQH 621
            VQ FS +Q +    G   TQY+ALFDNILHR RF KF+ +VSQE DK+CE +++ LL++
Sbjct: 64  SVQPFSVDQAE----GPKFTQYVALFDNILHRGRFSKFMTVVSQEFDKECELVIKDLLEN 119

Query: 620 GRLTQEQMYERAKSFKSGVQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDETPAKKRG 441
           GRLT +Q+ E   + K  V+    +SF KLV ARF+E CPAPE  + E S D    KKRG
Sbjct: 120 GRLTLKQITEGEYAVKDAVE----KSFLKLVDARFVECCPAPEVVLEEASKDAP--KKRG 173

Query: 440 AKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHAGEKRKSD 261
            K +K+VEV +T+EQRV+ AAAP  A+RFSI+T    +++T+    S   M  G+KRK D
Sbjct: 174 PKFSKIVEVPETIEQRVVAAAAPSGAMRFSILT----DSETDAHGGS---MSTGDKRKHD 226

Query: 260 TLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRALLKATRAA 81
            LELD EFA  N E+ LWR NFEEFIRCLRHK CVENVR RLDDGAA+VLRA+LK+TR A
Sbjct: 227 ALELDEEFA--NNEMVLWRVNFEEFIRCLRHKVCVENVRARLDDGAALVLRAMLKSTRTA 284

Query: 80  ENKVKMENSASLSLNSIFEEVMKSEA 3
           E KVK ENS  +S ++I+EEV+ SEA
Sbjct: 285 EKKVKTENSVPVSFSTIYEEVINSEA 310


>ref|XP_007038705.1| RNA polymerase III subunit RPC82 family protein, putative isoform 2
           [Theobroma cacao] gi|508775950|gb|EOY23206.1| RNA
           polymerase III subunit RPC82 family protein, putative
           isoform 2 [Theobroma cacao]
          Length = 463

 Score =  358 bits (919), Expect = 5e-96
 Identities = 187/316 (59%), Positives = 243/316 (76%), Gaps = 5/316 (1%)
 Frame = -2

Query: 986 MVTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQ 807
           MVT +GIK+AV ++T+HFG+LVAKVCE LL++GPLTLQ +VRFTELTS QVKNSLL+LIQ
Sbjct: 1   MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 806 HNCVQAFSAEQPDDIVNG-QIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGL 630
           HNCVQAF  EQP    +G ++++QY+ALF+NI+HR RFPKFL +VSQ+LDK C +L+E L
Sbjct: 61  HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 629 LQHGRLTQEQMYERAKSFKSG----VQNDARESFQKLVTARFIEQCPAPEPFVAEPSPDE 462
           L HGRLT +QM +RAKS ++     + +  RE+F KL+ A F+E+CPA EP + +P+ +E
Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEE 180

Query: 461 TPAKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHA 282
           T A+KR  KSAK++E ++TLEQRVLEAA P EALRF ++T  E   D    +++S  M  
Sbjct: 181 TSARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSMTV 240

Query: 281 GEKRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRAL 102
           G+KRK D LE + E  + +++V LWRANFEEFIR LRHKA +ENVR  LDDGA IV+ A+
Sbjct: 241 GKKRKLDALESETEGEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVISAM 300

Query: 101 LKATRAAENKVKMENS 54
           L+ATR AE KVK ENS
Sbjct: 301 LEATRTAEKKVKTENS 316


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Fragaria
           vesca subsp. vesca]
          Length = 534

 Score =  357 bits (917), Expect = 8e-96
 Identities = 193/333 (57%), Positives = 245/333 (73%), Gaps = 6/333 (1%)
 Frame = -2

Query: 983 VTPYGIKFAVHIVTSHFGNLVAKVCENLLKRGPLTLQQLVRFTELTSVQVKNSLLILIQH 804
           VT  GI++AV I+T HFGNLVAKVCE LLK GPL L  L+R T LT  QVKNSLLIL+QH
Sbjct: 3   VTNSGIQYAVQIITKHFGNLVAKVCETLLKSGPLNLGALIRSTALTPQQVKNSLLILVQH 62

Query: 803 NCVQAFSAEQPDDIVNGQIHTQYLALFDNILHRLRFPKFLEMVSQELDKDCEQLLEGLLQ 624
           NCVQ F+ E         +  QY+A++DNILHRLRF KFL +V+QEL  +C+QL+ GLL+
Sbjct: 63  NCVQPFTQES-----KAGLKVQYIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLLE 117

Query: 623 HGRLTQEQMYERA----KSFKSGVQN--DARESFQKLVTARFIEQCPAPEPFVAEPSPDE 462
           HGRLTQ+Q+ +RA    KS  + VQ+   A+E+F +LV ARF+E+CPAPEP + EP   E
Sbjct: 118 HGRLTQQQLMDRADQKSKSDSTEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPEQE 177

Query: 461 TPAKKRGAKSAKVVEVRKTLEQRVLEAAAPMEALRFSIMTNLEAENDTEMSKDSSPIMHA 282
            P K RG KSAK+V+V +T+EQRVL AA PMEA+RF I T  E ++  + S+++   M  
Sbjct: 178 GPKKPRG-KSAKMVQVPETIEQRVLAAARPMEAIRFLITTESETDDPLQKSENNFSSMGV 236

Query: 281 GEKRKSDTLELDGEFASDNKEVTLWRANFEEFIRCLRHKACVENVRVRLDDGAAIVLRAL 102
           GEKRK D L+ + E  S++K V LWRANFE+FIRCLRHKAC+E+VR R DDGAA+VLRA+
Sbjct: 237 GEKRKFDDLDSE-EHGSNDKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAVVLRAV 295

Query: 101 LKATRAAENKVKMENSASLSLNSIFEEVMKSEA 3
           LKATR  E KVK + S  L +++I+EEVM SEA
Sbjct: 296 LKATRNQETKVKTDYSGPLKMDAIYEEVMDSEA 328