BLASTX nr result
ID: Ziziphus21_contig00011561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00011561
(1489 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009373279.1| PREDICTED: RNA pseudouridine synthase 1-like... 459 e-126
ref|XP_008245928.1| PREDICTED: RNA pseudouridine synthase 1 [Pru... 456 e-125
ref|XP_008359854.1| PREDICTED: RNA pseudouridine synthase 1-like... 456 e-125
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun... 451 e-123
ref|XP_010105628.1| RNA pseudourine synthase 1 [Morus notabilis]... 446 e-122
ref|XP_010104151.1| RNA pseudourine synthase 1 [Morus notabilis]... 442 e-121
ref|XP_011466146.1| PREDICTED: RNA pseudouridine synthase 1 isof... 429 e-117
ref|XP_011466144.1| PREDICTED: RNA pseudouridine synthase 1 isof... 429 e-117
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like... 429 e-117
ref|XP_011466145.1| PREDICTED: RNA pseudouridine synthase 1 isof... 426 e-116
ref|XP_012088875.1| PREDICTED: RNA pseudouridine synthase 1 [Jat... 425 e-116
gb|KDO81689.1| hypothetical protein CISIN_1g018524mg [Citrus sin... 425 e-116
gb|KDP23378.1| hypothetical protein JCGZ_23211 [Jatropha curcas] 423 e-115
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr... 417 e-114
ref|XP_011023769.1| PREDICTED: RNA pseudouridine synthase 1 [Pop... 407 e-110
ref|XP_008453651.1| PREDICTED: RNA pseudouridine synthase 1 [Cuc... 405 e-110
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [... 403 e-109
ref|XP_007031141.1| Pseudouridine synthase family protein isofor... 402 e-109
ref|XP_007031140.1| Pseudouridine synthase family protein isofor... 402 e-109
ref|XP_012476516.1| PREDICTED: RNA pseudouridine synthase 1 [Gos... 400 e-108
>ref|XP_009373279.1| PREDICTED: RNA pseudouridine synthase 1-like [Pyrus x bretschneideri]
Length = 349
Score = 459 bits (1180), Expect = e-126
Identities = 227/334 (67%), Positives = 258/334 (77%)
Frame = -3
Query: 1403 TITKCPEMFHSSCNCSSTMSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXX 1224
T+ P+ F +TMS D P+SQ+ALQ NY ISK IE
Sbjct: 14 TVLFAPKAFVFLSRRRATMSAPHDAANPSSQDALQTPVNYPVPLSPPLPAISKHIELARA 73
Query: 1223 XXXXXXXXXXXXXXSDLIYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGASL 1044
+D++YEDEWL+ VNKPQGVYCESVL SVP+++CDS V ET +
Sbjct: 74 MSASSKSSLFSLSRNDVVYEDEWLIVVNKPQGVYCESVLESVPQLLCDSAESVAETPTNQ 133
Query: 1043 PELHLANRLDRDTSGLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRS 864
PELHLANRLDRDTSGLMIITKSHKVA+KLVKAFTDHKVSKTYIA C+GSAPKWERIT++S
Sbjct: 134 PELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHKVSKTYIARCLGSAPKWERITLKS 193
Query: 863 GHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNII 684
GHGRSKFGAWRVYAASDVGRTLPGGS+VRDMETSFE+LS+NG E+PS+ KDE N++
Sbjct: 194 GHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEILSVNGQGSYEEPSEFKKDEANVV 253
Query: 683 VVEDKAVIDREGKKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYD 504
VVE+KAVID + KKDEIL+RA+P SGRTHQIRLHCQYLGISIRGDVKYEG YEWKG TYD
Sbjct: 254 VVEEKAVIDGDAKKDEILVRARPMSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYD 313
Query: 503 GHELHAESLSLEHPVTGLPLMLQAPLPIWAQQEL 402
HELHAESLSLEHPVTGLP+M +AP+P WA Q L
Sbjct: 314 SHELHAESLSLEHPVTGLPVMFRAPVPSWASQAL 347
>ref|XP_008245928.1| PREDICTED: RNA pseudouridine synthase 1 [Prunus mume]
Length = 318
Score = 456 bits (1174), Expect = e-125
Identities = 225/318 (70%), Positives = 256/318 (80%)
Frame = -3
Query: 1349 MSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLI 1170
MS ++D P+SQNALQ QNY PISK IE D++
Sbjct: 1 MSVQSDAINPSSQNALQISQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVV 60
Query: 1169 YEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGASLPELHLANRLDRDTSGLMI 990
+ED+WL+ VNKPQGVYCESVL SVP+++CDS V T A+ ELHLANRLDRDTSGLM+
Sbjct: 61 FEDQWLIVVNKPQGVYCESVLESVPQLLCDSAESVAGTPANQLELHLANRLDRDTSGLMV 120
Query: 989 ITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASDV 810
ITKSHKVASKLVKAFTDHK+SKTYIA CIGSAPKWERIT++SGHGRSKFGAWRVYAASDV
Sbjct: 121 ITKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDV 180
Query: 809 GRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEIL 630
GRTLPGGS+VRDMETSFEVLSING +++PS+ KDE N +VV++KAVID++ KKDEIL
Sbjct: 181 GRTLPGGSMVRDMETSFEVLSINGQGSLKEPSEFKKDEANTVVVQEKAVIDKDTKKDEIL 240
Query: 629 IRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTGL 450
+RA+PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG TYDGHELHAESLS EHP+TGL
Sbjct: 241 VRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGL 300
Query: 449 PLMLQAPLPIWAQQEL*P 396
P+M QAP+P WA Q L P
Sbjct: 301 PVMFQAPVPSWASQALQP 318
>ref|XP_008359854.1| PREDICTED: RNA pseudouridine synthase 1-like [Malus domestica]
Length = 349
Score = 456 bits (1173), Expect = e-125
Identities = 224/317 (70%), Positives = 250/317 (78%)
Frame = -3
Query: 1352 TMSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDL 1173
TMS + D P+SQ ALQ NY ISK IE +D+
Sbjct: 31 TMSAQHDAANPSSQXALQTPGNYPVPLSPPLPAISKHIELARAMSASSKSGLFSLSRNDV 90
Query: 1172 IYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGASLPELHLANRLDRDTSGLM 993
+YEDEWL+ VNKPQGVYCESVL SVP+++CDS V ET PELHLANRLDRDTSGLM
Sbjct: 91 VYEDEWLIVVNKPQGVYCESVLESVPQLLCDSAESVAETRTKQPELHLANRLDRDTSGLM 150
Query: 992 IITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASD 813
IITKSHKVA+KLVKAFTDHKVSKTYIA C+GSAPKWERIT++SGHGRSKFGAWRVYAASD
Sbjct: 151 IITKSHKVAAKLVKAFTDHKVSKTYIARCVGSAPKWERITLKSGHGRSKFGAWRVYAASD 210
Query: 812 VGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEI 633
VGRTLPGGS+VRDMET FE+LS NG +PS+ KDE N++VVE+KAVID + KKDEI
Sbjct: 211 VGRTLPGGSMVRDMETXFEILSXNGQGSYREPSEFKKDEANVVVVEEKAVIDGDAKKDEI 270
Query: 632 LIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTG 453
L+RA+PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG TYDGHELHAESLSLEHPVTG
Sbjct: 271 LVRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYDGHELHAESLSLEHPVTG 330
Query: 452 LPLMLQAPLPIWAQQEL 402
LP+M +AP+P WA Q L
Sbjct: 331 LPVMFRAPVPSWASQAL 347
>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
gi|462401230|gb|EMJ06787.1| hypothetical protein
PRUPE_ppa008866mg [Prunus persica]
Length = 316
Score = 451 bits (1159), Expect = e-123
Identities = 225/318 (70%), Positives = 254/318 (79%)
Frame = -3
Query: 1349 MSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLI 1170
MS + D P+SQNALQ QNY PISK IE D++
Sbjct: 1 MSVQFDAINPSSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVV 60
Query: 1169 YEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGASLPELHLANRLDRDTSGLMI 990
+ED+WL+ VNKPQGVYCESVL SVP+++CDS T A+ ELHLANRLDRDTSGLM+
Sbjct: 61 FEDQWLIVVNKPQGVYCESVLESVPQLLCDSAES--GTPANQLELHLANRLDRDTSGLMV 118
Query: 989 ITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASDV 810
ITKSHKVASKLVKAFTDHK+SKTYIA CIGSAPKWERIT++SGHGRSKFGAWRVYAASDV
Sbjct: 119 ITKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDV 178
Query: 809 GRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEIL 630
GRTLPGGS+VRDMETSFEVLSING +++PS+ KDE N IVV++KAVID++ KKDEIL
Sbjct: 179 GRTLPGGSMVRDMETSFEVLSINGQGSLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEIL 238
Query: 629 IRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTGL 450
+RA+PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG TYDGHELHAESLS EHP+TGL
Sbjct: 239 VRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGL 298
Query: 449 PLMLQAPLPIWAQQEL*P 396
P+M QAP+P WA Q L P
Sbjct: 299 PVMFQAPVPSWASQALQP 316
>ref|XP_010105628.1| RNA pseudourine synthase 1 [Morus notabilis]
gi|587966211|gb|EXC51319.1| RNA pseudourine synthase 1
[Morus notabilis]
Length = 319
Score = 446 bits (1147), Expect = e-122
Identities = 219/315 (69%), Positives = 254/315 (80%), Gaps = 1/315 (0%)
Frame = -3
Query: 1349 MSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLI 1170
M D DPTKPTSQNAL+ QNY P+SK +E +D +
Sbjct: 1 MPDPEDPTKPTSQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFV 60
Query: 1169 YEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVP-ETGASLPELHLANRLDRDTSGLM 993
+EDE LVAVNKPQG+YCESV SV +V+ DS P ET AS PELHLANRLDRDTSGLM
Sbjct: 61 FEDECLVAVNKPQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLM 120
Query: 992 IITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASD 813
+ITKSHKVASKLVKAFT HKVSKTYIAFC+GSAPKWE ITI+SGHGRSKFGAWRVYAASD
Sbjct: 121 LITKSHKVASKLVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASD 180
Query: 812 VGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEI 633
VGRTLPGGSVVRDMETSFEVLS+NG R+ ++PS+ KD +N+++VE+KA+IDR+GKKDEI
Sbjct: 181 VGRTLPGGSVVRDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEI 240
Query: 632 LIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTG 453
L+RA+P+SGR+HQIRLHCQYLGIS+RGDVKYEG +WKG TY+GHELHAESLS EHP+T
Sbjct: 241 LVRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITS 300
Query: 452 LPLMLQAPLPIWAQQ 408
LP++L PLP+WA Q
Sbjct: 301 LPVVLSTPLPMWASQ 315
>ref|XP_010104151.1| RNA pseudourine synthase 1 [Morus notabilis]
gi|587910970|gb|EXB98832.1| RNA pseudourine synthase 1
[Morus notabilis]
Length = 319
Score = 442 bits (1137), Expect = e-121
Identities = 218/315 (69%), Positives = 253/315 (80%), Gaps = 1/315 (0%)
Frame = -3
Query: 1349 MSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLI 1170
M D DPTKPTSQNAL+ QNY P+SK +E +D +
Sbjct: 1 MPDPEDPTKPTSQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFV 60
Query: 1169 YEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVP-ETGASLPELHLANRLDRDTSGLM 993
+EDE LVAVNKPQG+YCESV SV +V+ DS P ET AS PELHLANRLDRDTSGLM
Sbjct: 61 FEDECLVAVNKPQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLM 120
Query: 992 IITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASD 813
+ITKSHKVASKLVKAFT HKVSKTYIAFC+GSAPKWE ITI+SGHGRSKFGAWRVYAASD
Sbjct: 121 LITKSHKVASKLVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASD 180
Query: 812 VGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEI 633
VGRTLPGGSVVRDMETSFEVLS+NG R+ ++PS+ KD +N+++VE+KA+IDR+GKKDEI
Sbjct: 181 VGRTLPGGSVVRDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEI 240
Query: 632 LIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTG 453
L+RA+P+SGR+HQIRLHCQYLGIS+RGDVKYEG +WKG TY+GHELHAESLS EHP+T
Sbjct: 241 LVRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITS 300
Query: 452 LPLMLQAPLPIWAQQ 408
L ++L PLP+WA Q
Sbjct: 301 LLVVLSTPLPMWASQ 315
>ref|XP_011466146.1| PREDICTED: RNA pseudouridine synthase 1 isoform X3 [Fragaria vesca
subsp. vesca]
Length = 352
Score = 429 bits (1103), Expect = e-117
Identities = 218/334 (65%), Positives = 256/334 (76%), Gaps = 1/334 (0%)
Frame = -3
Query: 1406 KTITKCPEMFHSSCNCSSTMSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXX 1227
KT+T P+ F+ S TMSD+ P+SQNALQ QNY ISK +E
Sbjct: 22 KTLTSFPKPFNFLR--SVTMSDQ-----PSSQNALQISQNYPVPLSPPLPLISKNMELAR 74
Query: 1226 XXXXXXXXXXXXXXXSDLIYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGAS 1047
+D++YED+WL+ VNKPQG+YCE+VL SVP+++ +S A +
Sbjct: 75 AMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAESAAGLE---GK 131
Query: 1046 LPELHLANRLDRDTSGLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIR 867
PE+HLANRLDRDTSG+MIITKSHKVA+KLVKAFTDHKVSKTYIA CIGSAPKWERIT++
Sbjct: 132 APEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVK 191
Query: 866 SGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNI 687
SGHGRSKFGAWRVYAASDVGR LPGGSVVRDMETSFE+LSING +PS+ D+D I
Sbjct: 192 SGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKI 251
Query: 686 IVVEDKAV-IDREGKKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGIT 510
+VVE+KAV ID + KKDEIL+ A+PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG T
Sbjct: 252 LVVEEKAVIIDGDAKKDEILVIARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTT 311
Query: 509 YDGHELHAESLSLEHPVTGLPLMLQAPLPIWAQQ 408
Y GHELHAES+SL+HP+TGLP++ +APLP WA Q
Sbjct: 312 YGGHELHAESMSLDHPITGLPILFRAPLPSWANQ 345
>ref|XP_011466144.1| PREDICTED: RNA pseudouridine synthase 1 isoform X1 [Fragaria vesca
subsp. vesca]
Length = 375
Score = 429 bits (1103), Expect = e-117
Identities = 218/334 (65%), Positives = 256/334 (76%), Gaps = 1/334 (0%)
Frame = -3
Query: 1406 KTITKCPEMFHSSCNCSSTMSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXX 1227
KT+T P+ F+ S TMSD+ P+SQNALQ QNY ISK +E
Sbjct: 22 KTLTSFPKPFNFLR--SVTMSDQ-----PSSQNALQISQNYPVPLSPPLPLISKNMELAR 74
Query: 1226 XXXXXXXXXXXXXXXSDLIYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGAS 1047
+D++YED+WL+ VNKPQG+YCE+VL SVP+++ +S A +
Sbjct: 75 AMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAESAAGLE---GK 131
Query: 1046 LPELHLANRLDRDTSGLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIR 867
PE+HLANRLDRDTSG+MIITKSHKVA+KLVKAFTDHKVSKTYIA CIGSAPKWERIT++
Sbjct: 132 APEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVK 191
Query: 866 SGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNI 687
SGHGRSKFGAWRVYAASDVGR LPGGSVVRDMETSFE+LSING +PS+ D+D I
Sbjct: 192 SGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKI 251
Query: 686 IVVEDKAV-IDREGKKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGIT 510
+VVE+KAV ID + KKDEIL+ A+PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG T
Sbjct: 252 LVVEEKAVIIDGDAKKDEILVIARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTT 311
Query: 509 YDGHELHAESLSLEHPVTGLPLMLQAPLPIWAQQ 408
Y GHELHAES+SL+HP+TGLP++ +APLP WA Q
Sbjct: 312 YGGHELHAESMSLDHPITGLPILFRAPLPSWANQ 345
>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
Length = 324
Score = 429 bits (1103), Expect = e-117
Identities = 219/316 (69%), Positives = 244/316 (77%), Gaps = 6/316 (1%)
Frame = -3
Query: 1337 TDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLIYEDE 1158
++PT+PTSQNA Q QNY ISK IE SD++YEDE
Sbjct: 2 SNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDE 61
Query: 1157 WLVAVNKPQGVYCESVLASVPEVICDSPAPVPE------TGASLPELHLANRLDRDTSGL 996
WLVAVNKPQGVYCESVLASVP ++ A T +L ELHLANRLDRDTSG+
Sbjct: 62 WLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGV 121
Query: 995 MIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAAS 816
M+ITKSHKVASKLVKAFTDHKVSKTYIA CIG APKW+RITI SGHGRSKFGAWRVYAAS
Sbjct: 122 MVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAAS 181
Query: 815 DVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDE 636
DVGR LPGGSVVRDM TSFEVLS+NG ++PS+L +DE+N IVVE KAV+D + KK+E
Sbjct: 182 DVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENNIVVEKKAVLDADAKKNE 241
Query: 635 ILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVT 456
IL+R PRSGRTHQIRLHCQYLGISIRGDVKYEG YEW G YDGHELHAESLSLEHP+T
Sbjct: 242 ILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPIT 301
Query: 455 GLPLMLQAPLPIWAQQ 408
G P+M+QAPLP+WA Q
Sbjct: 302 GCPVMVQAPLPLWATQ 317
>ref|XP_011466145.1| PREDICTED: RNA pseudouridine synthase 1 isoform X2 [Fragaria vesca
subsp. vesca]
Length = 373
Score = 426 bits (1096), Expect = e-116
Identities = 217/334 (64%), Positives = 254/334 (76%), Gaps = 1/334 (0%)
Frame = -3
Query: 1406 KTITKCPEMFHSSCNCSSTMSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXX 1227
KT+T P+ F+ S TMSD+ P+SQNALQ QNY ISK +E
Sbjct: 22 KTLTSFPKPFNFLR--SVTMSDQ-----PSSQNALQISQNYPVPLSPPLPLISKNMELAR 74
Query: 1226 XXXXXXXXXXXXXXXSDLIYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGAS 1047
+D++YED+WL+ VNKPQG+YCE+VL SVP+++ +S
Sbjct: 75 AMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAESGLE-----GK 129
Query: 1046 LPELHLANRLDRDTSGLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIR 867
PE+HLANRLDRDTSG+MIITKSHKVA+KLVKAFTDHKVSKTYIA CIGSAPKWERIT++
Sbjct: 130 APEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVK 189
Query: 866 SGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNI 687
SGHGRSKFGAWRVYAASDVGR LPGGSVVRDMETSFE+LSING +PS+ D+D I
Sbjct: 190 SGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKI 249
Query: 686 IVVEDKAV-IDREGKKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGIT 510
+VVE+KAV ID + KKDEIL+ A+PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG T
Sbjct: 250 LVVEEKAVIIDGDAKKDEILVIARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTT 309
Query: 509 YDGHELHAESLSLEHPVTGLPLMLQAPLPIWAQQ 408
Y GHELHAES+SL+HP+TGLP++ +APLP WA Q
Sbjct: 310 YGGHELHAESMSLDHPITGLPILFRAPLPSWANQ 343
>ref|XP_012088875.1| PREDICTED: RNA pseudouridine synthase 1 [Jatropha curcas]
Length = 356
Score = 425 bits (1093), Expect = e-116
Identities = 219/325 (67%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Frame = -3
Query: 1355 STMSDET-DPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXS 1179
S+MSD T +PTSQNA N++NY ISK+IE +
Sbjct: 33 SSMSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKN 92
Query: 1178 DLIYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPET-GAS--LPELHLANRLDRD 1008
++IYED+WLVAVNKPQGVYCE++L SVP VICDS T GAS LPELHLANRLDRD
Sbjct: 93 NVIYEDQWLVAVNKPQGVYCEALLESVPLVICDSSTSTNLTEGASDTLPELHLANRLDRD 152
Query: 1007 TSGLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRV 828
TSG+ +ITKSHKVASKLVKAFT HKV KTYIAFC GSAP WE+IT++SGHGRSKFGAWR+
Sbjct: 153 TSGVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRI 212
Query: 827 YAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREG 648
YA SDVGRTLPGGS++RDMETSFEVLS+NG R ++ + K E N+IVVE+KA ID
Sbjct: 213 YAVSDVGRTLPGGSIIRDMETSFEVLSVNGQRSFKELPEFKKGE-NVIVVEEKAEIDAAA 271
Query: 647 KKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLE 468
KKDEIL+RA PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG +D HELHAES+S E
Sbjct: 272 KKDEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRRFDAHELHAESMSFE 331
Query: 467 HPVTGLPLMLQAPLPIWAQQEL*PL 393
HPVTGLP+ML+APLP+WA L PL
Sbjct: 332 HPVTGLPVMLRAPLPLWATDVLEPL 356
>gb|KDO81689.1| hypothetical protein CISIN_1g018524mg [Citrus sinensis]
gi|641863003|gb|KDO81690.1| hypothetical protein
CISIN_1g018524mg [Citrus sinensis]
gi|641863004|gb|KDO81691.1| hypothetical protein
CISIN_1g018524mg [Citrus sinensis]
Length = 354
Score = 425 bits (1092), Expect = e-116
Identities = 217/323 (67%), Positives = 246/323 (76%), Gaps = 6/323 (1%)
Frame = -3
Query: 1352 TMSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDL 1173
+++ ++PT+PTSQNA Q QNY ISK IE SD+
Sbjct: 27 SLASMSNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDV 86
Query: 1172 IYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPE------TGASLPELHLANRLDR 1011
+YEDEWLVAVNKPQGVYCESVLASVP ++ A T +L ELHLANRLDR
Sbjct: 87 LYEDEWLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDR 146
Query: 1010 DTSGLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWR 831
DTSG+M+ITKSHKVASKLVKAFTDHKVSKTYIA CIG APKW+RITI SGHGRSKFGAWR
Sbjct: 147 DTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWR 206
Query: 830 VYAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDRE 651
VYAASDVGR LPGGSVVRDM TSFEVLS+NG ++PS+L + E+N IVVE KAV+D +
Sbjct: 207 VYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDAD 266
Query: 650 GKKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSL 471
KK+EIL+RA PRSGRTHQIRLHCQYLGISIRGDVKYEG YEW G YDGHELHAESLS
Sbjct: 267 AKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSF 326
Query: 470 EHPVTGLPLMLQAPLPIWAQQEL 402
+HPVTG P+M+QAPLP+W + L
Sbjct: 327 DHPVTGCPVMVQAPLPLWGTEAL 349
>gb|KDP23378.1| hypothetical protein JCGZ_23211 [Jatropha curcas]
Length = 322
Score = 423 bits (1088), Expect = e-115
Identities = 218/323 (67%), Positives = 248/323 (76%), Gaps = 4/323 (1%)
Frame = -3
Query: 1349 MSDET-DPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDL 1173
MSD T +PTSQNA N++NY ISK+IE +++
Sbjct: 1 MSDLTVSVNRPTSQNAPLNVENYPTPLSPPFPSISKEIELARAMSASSRSNLFALSKNNV 60
Query: 1172 IYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPET-GAS--LPELHLANRLDRDTS 1002
IYED+WLVAVNKPQGVYCE++L SVP VICDS T GAS LPELHLANRLDRDTS
Sbjct: 61 IYEDQWLVAVNKPQGVYCEALLESVPLVICDSSTSTNLTEGASDTLPELHLANRLDRDTS 120
Query: 1001 GLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYA 822
G+ +ITKSHKVASKLVKAFT HKV KTYIAFC GSAP WE+IT++SGHGRSKFGAWR+YA
Sbjct: 121 GVTVITKSHKVASKLVKAFTGHKVKKTYIAFCTGSAPTWEKITVKSGHGRSKFGAWRIYA 180
Query: 821 ASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKK 642
SDVGRTLPGGS++RDMETSFEVLS+NG R ++ + K E N+IVVE+KA ID KK
Sbjct: 181 VSDVGRTLPGGSIIRDMETSFEVLSVNGQRSFKELPEFKKGE-NVIVVEEKAEIDAAAKK 239
Query: 641 DEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHP 462
DEIL+RA PRSGRTHQIRLHCQYLGISIRGDVKYEG YEWKG +D HELHAES+S EHP
Sbjct: 240 DEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRRFDAHELHAESMSFEHP 299
Query: 461 VTGLPLMLQAPLPIWAQQEL*PL 393
VTGLP+ML+APLP+WA L PL
Sbjct: 300 VTGLPVMLRAPLPLWATDVLEPL 322
>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
gi|567881937|ref|XP_006433527.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535648|gb|ESR46766.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535649|gb|ESR46767.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
Length = 357
Score = 417 bits (1073), Expect = e-114
Identities = 214/323 (66%), Positives = 242/323 (74%), Gaps = 6/323 (1%)
Frame = -3
Query: 1352 TMSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDL 1173
+++ +PT+PT +NA Q QNY ISK IE SD+
Sbjct: 30 SLASMLNPTEPTCENAPQIQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDV 89
Query: 1172 IYEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPVPE------TGASLPELHLANRLDR 1011
+YEDEW VAVNKPQGVYCESVLASVP + A T +L ELHLANRLDR
Sbjct: 90 LYEDEWFVAVNKPQGVYCESVLASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDR 149
Query: 1010 DTSGLMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWR 831
DTSG+M+ITKSHKVASKLVKAFTDHKVSKTYIA CIG APKW+RITI SGHGRSKFGAWR
Sbjct: 150 DTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWR 209
Query: 830 VYAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDRE 651
VYAASDVGR LPGGSVVRDM TSFEVLS+NG ++PS+L + E+N IVVE KAV+D +
Sbjct: 210 VYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDAD 269
Query: 650 GKKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSL 471
KK+EIL+RA PRSGRTHQIRLHCQYLGISIRGDVKYEG YEW G YDGHELHAESLS
Sbjct: 270 AKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSF 329
Query: 470 EHPVTGLPLMLQAPLPIWAQQEL 402
+HPVTG P+M+QAPLP+W + L
Sbjct: 330 DHPVTGCPVMVQAPLPLWGTEAL 352
>ref|XP_011023769.1| PREDICTED: RNA pseudouridine synthase 1 [Populus euphratica]
Length = 316
Score = 407 bits (1047), Expect = e-110
Identities = 210/316 (66%), Positives = 241/316 (76%), Gaps = 2/316 (0%)
Frame = -3
Query: 1349 MSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLI 1170
MS D TSQN NLQNY P+SK++E SD++
Sbjct: 1 MSASQDSMNATSQNTPINLQNYPIPLSPPLNPLSKEMELARAMSASSRSSLFALSKSDVL 60
Query: 1169 YEDEWLVAVNKPQGVYCESVLASVPEVI--CDSPAPVPETGASLPELHLANRLDRDTSGL 996
Y+D+WL+AVNKPQGVYCE+VL SVP+V+ + + E + PELHLANRLDRDTSG+
Sbjct: 61 YQDKWLIAVNKPQGVYCETVLDSVPQVLDCLVESSGLDEGPVARPELHLANRLDRDTSGV 120
Query: 995 MIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAAS 816
M+ITK HKVASKLVKAFTDHKV KTYIA CIGSAPKWE+ITI+SGHGRSKFGA+RVYAAS
Sbjct: 121 MVITKLHKVASKLVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSKFGAFRVYAAS 180
Query: 815 DVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDE 636
DVGR+LPGGS V+ METSFEVLSING +PS+ + DNI+VVE+KAVID + KKDE
Sbjct: 181 DVGRSLPGGSTVKHMETSFEVLSINGQGSFREPSEF--NSDNILVVEEKAVIDTDAKKDE 238
Query: 635 ILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVT 456
IL+RA PRSGRTHQIRLH QYLGI IRGDVKYEG EWKG TYDGHELHAESLSLEHPVT
Sbjct: 239 ILVRAFPRSGRTHQIRLHSQYLGIPIRGDVKYEGVCEWKGRTYDGHELHAESLSLEHPVT 298
Query: 455 GLPLMLQAPLPIWAQQ 408
G PLM +AP+P+WA Q
Sbjct: 299 GQPLMFRAPMPVWATQ 314
>ref|XP_008453651.1| PREDICTED: RNA pseudouridine synthase 1 [Cucumis melo]
Length = 328
Score = 405 bits (1040), Expect = e-110
Identities = 196/314 (62%), Positives = 238/314 (75%)
Frame = -3
Query: 1337 TDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLIYEDE 1158
TD ++P + N +NY ISK +E +D+IYEDE
Sbjct: 2 TDSSEPVTGNCPSTGENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDE 61
Query: 1157 WLVAVNKPQGVYCESVLASVPEVICDSPAPVPETGASLPELHLANRLDRDTSGLMIITKS 978
WL+AVNKPQG+YCE+VLA+VP ++CDS +T +LPELHLANRLDRDTSG+M+ITKS
Sbjct: 62 WLIAVNKPQGIYCENVLAAVPRLLCDSANAGIKT--NLPELHLANRLDRDTSGVMVITKS 119
Query: 977 HKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASDVGRTL 798
HKVASKLVKAFTDH VSK+YIAFC+G++PKW++I ++SGHGRSKFG WRVYAA+DVGR+L
Sbjct: 120 HKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKIHVKSGHGRSKFGVWRVYAAADVGRSL 179
Query: 797 PGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEILIRAK 618
PGGS+VRDMET FEVLS+NG +E+ K K+E+ IVV K+++D + +KDE+LIRA+
Sbjct: 180 PGGSIVRDMETYFEVLSVNGKNTMEELQKFRKEEEETIVVHTKSLVDIDSQKDEVLIRAR 239
Query: 617 PRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTGLPLML 438
PRSGRTHQIRLHCQYLGI IRGDVKYEG EW G TYD HELHAESL HP+TG+PL L
Sbjct: 240 PRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKTYDSHELHAESLYFVHPITGIPLKL 299
Query: 437 QAPLPIWAQQEL*P 396
QAPLP WA Q L P
Sbjct: 300 QAPLPSWASQALQP 313
>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 321
Score = 403 bits (1035), Expect = e-109
Identities = 210/322 (65%), Positives = 240/322 (74%), Gaps = 3/322 (0%)
Frame = -3
Query: 1349 MSDETDPTKPTSQNALQNLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLI 1170
MS PTSQN LQNY ISKQIE SD++
Sbjct: 1 MSSPPGNINPTSQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVL 60
Query: 1169 YEDEWLVAVNKPQGVYCESVLASVPEVICDSPAPV-PETGA--SLPELHLANRLDRDTSG 999
YED+WL+AVNKPQGVYCE+VL SVP V+ S P GA + E HLANRLDRDTSG
Sbjct: 61 YEDQWLIAVNKPQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSG 120
Query: 998 LMIITKSHKVASKLVKAFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAA 819
+M+ITKSHKVASKLVKAFTDHK+ KTYIA CIG APKWE+ITI+SGHGRSKFG WRVYAA
Sbjct: 121 VMVITKSHKVASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAA 180
Query: 818 SDVGRTLPGGSVVRDMETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKD 639
SDVG+TLPGGS V+DMETSFE+LS+NG ++ S+ KDE NI+VVE+KA + + KK
Sbjct: 181 SDVGQTLPGGSTVKDMETSFELLSVNGQGSFKELSEFEKDE-NILVVEEKAAKNADVKKV 239
Query: 638 EILIRAKPRSGRTHQIRLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPV 459
EIL+RA P+SGRTHQIRLHCQYLGISIRGDVKYEG YEW+G TYDGHELHAE+LS EHPV
Sbjct: 240 EILVRAFPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPV 299
Query: 458 TGLPLMLQAPLPIWAQQEL*PL 393
TG+P+ML+APLP WA Q PL
Sbjct: 300 TGVPVMLRAPLPSWAIQASQPL 321
>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
gi|508719746|gb|EOY11643.1| Pseudouridine synthase family
protein isoform 2 [Theobroma cacao]
Length = 313
Score = 402 bits (1034), Expect = e-109
Identities = 201/303 (66%), Positives = 232/303 (76%), Gaps = 3/303 (0%)
Frame = -3
Query: 1292 QNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLIYEDEWLVAVNKPQGVYCES 1113
QNY ISK IE SD++YEDEWL+AVNKPQG+YC+S
Sbjct: 9 QNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIYCDS 68
Query: 1112 VLASVPEVICDSPAP---VPETGASLPELHLANRLDRDTSGLMIITKSHKVASKLVKAFT 942
VLAS+P + DS AS ELHLANRLDRDTSG+M+ITKSHKVA+ LVKAFT
Sbjct: 69 VLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAALVKAFT 128
Query: 941 DHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETS 762
+H V KTY+AFCIGSAPK ERITI+SGHGRSKFGAWRVYAA DVGR LPGGS+VRDM T+
Sbjct: 129 NHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIVRDMGTT 188
Query: 761 FEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEILIRAKPRSGRTHQIRLH 582
FEVLSING + ++PS+ +KDE+ ++VE+KAVID + +KDEIL+RA PRSGRTHQIRLH
Sbjct: 189 FEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVDAQKDEILVRAFPRSGRTHQIRLH 248
Query: 581 CQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTGLPLMLQAPLPIWAQQEL 402
CQYLGI IRGDVKYEG YEWKG YD HELHAESLS +HPVTG P+M+QAPLP+WA Q L
Sbjct: 249 CQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQAPLPLWASQAL 308
Query: 401 *PL 393
PL
Sbjct: 309 QPL 311
>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
gi|508719745|gb|EOY11642.1| Pseudouridine synthase family
protein isoform 1 [Theobroma cacao]
Length = 345
Score = 402 bits (1034), Expect = e-109
Identities = 201/303 (66%), Positives = 232/303 (76%), Gaps = 3/303 (0%)
Frame = -3
Query: 1292 QNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLIYEDEWLVAVNKPQGVYCES 1113
QNY ISK IE SD++YEDEWL+AVNKPQG+YC+S
Sbjct: 41 QNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIYCDS 100
Query: 1112 VLASVPEVICDSPAP---VPETGASLPELHLANRLDRDTSGLMIITKSHKVASKLVKAFT 942
VLAS+P + DS AS ELHLANRLDRDTSG+M+ITKSHKVA+ LVKAFT
Sbjct: 101 VLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAALVKAFT 160
Query: 941 DHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETS 762
+H V KTY+AFCIGSAPK ERITI+SGHGRSKFGAWRVYAA DVGR LPGGS+VRDM T+
Sbjct: 161 NHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIVRDMGTT 220
Query: 761 FEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEILIRAKPRSGRTHQIRLH 582
FEVLSING + ++PS+ +KDE+ ++VE+KAVID + +KDEIL+RA PRSGRTHQIRLH
Sbjct: 221 FEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVDAQKDEILVRAFPRSGRTHQIRLH 280
Query: 581 CQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTGLPLMLQAPLPIWAQQEL 402
CQYLGI IRGDVKYEG YEWKG YD HELHAESLS +HPVTG P+M+QAPLP+WA Q L
Sbjct: 281 CQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQAPLPLWASQAL 340
Query: 401 *PL 393
PL
Sbjct: 341 QPL 343
>ref|XP_012476516.1| PREDICTED: RNA pseudouridine synthase 1 [Gossypium raimondii]
gi|763758988|gb|KJB26319.1| hypothetical protein
B456_004G236900 [Gossypium raimondii]
Length = 349
Score = 400 bits (1027), Expect = e-108
Identities = 201/303 (66%), Positives = 233/303 (76%), Gaps = 4/303 (1%)
Frame = -3
Query: 1298 NLQNYXXXXXXXXXPISKQIEXXXXXXXXXXXXXXXXXXSDLIYEDEWLVAVNKPQGVYC 1119
+LQNY ISK IE SD++YEDEWL+AVNKPQG+YC
Sbjct: 43 SLQNYPTPLSPPLPSISKDIELARAMSASSKSSLFGLSRSDILYEDEWLIAVNKPQGIYC 102
Query: 1118 ESVLASVPEVICDSPAPVPE----TGASLPELHLANRLDRDTSGLMIITKSHKVASKLVK 951
+++LASVP + S AP AS ELHLANRLDRDTSG+M+ITKSHKVAS LVK
Sbjct: 103 DTILASVPRFLSGS-APSDRLCEGNQASTLELHLANRLDRDTSGVMVITKSHKVASVLVK 161
Query: 950 AFTDHKVSKTYIAFCIGSAPKWERITIRSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDM 771
AFT+HKV KTY+AFCIGSAPK ERITI+SGHGRSKFGAWRVYAA DVGR LPGGS+VRDM
Sbjct: 162 AFTNHKVQKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIVRDM 221
Query: 770 ETSFEVLSINGHRIIEKPSKLLKDEDNIIVVEDKAVIDREGKKDEILIRAKPRSGRTHQI 591
ET+FEVLSING + ++ S+ ++DE++ IVVE+KAV D + KDEIL+RA PRSGRTHQI
Sbjct: 222 ETTFEVLSINGQQNYKEQSECMEDEEHSIVVEEKAVTDVDANKDEILVRAFPRSGRTHQI 281
Query: 590 RLHCQYLGISIRGDVKYEGAYEWKGITYDGHELHAESLSLEHPVTGLPLMLQAPLPIWAQ 411
RLHCQYLG IRGDVKYEG YEWKG TYD HELHAESL+ +HPVTG PL++QAPLP+WA
Sbjct: 282 RLHCQYLGFPIRGDVKYEGVYEWKGRTYDAHELHAESLTFQHPVTGFPLLIQAPLPLWAS 341
Query: 410 QEL 402
Q L
Sbjct: 342 QAL 344