BLASTX nr result

ID: Ziziphus21_contig00010508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00010508
         (259 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011625571.1| PREDICTED: splicing factor U2af large subuni...    56   9e-06
ref|XP_011625567.1| PREDICTED: splicing factor U2af large subuni...    56   9e-06
ref|XP_011625566.1| PREDICTED: splicing factor U2af large subuni...    56   9e-06
gb|ERM95215.1| hypothetical protein AMTR_s00009p00267190 [Ambore...    56   9e-06

>ref|XP_011625571.1| PREDICTED: splicing factor U2af large subunit A isoform X3
           [Amborella trichopoda]
          Length = 578

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 172 GPLASVVIPRPLPDGQPSPGVGKVFLEYV 258
           GPL +VVIPRP PDGQP+PG+GKVFLEYV
Sbjct: 509 GPLTTVVIPRPSPDGQPTPGLGKVFLEYV 537


>ref|XP_011625567.1| PREDICTED: splicing factor U2af large subunit B isoform X2
           [Amborella trichopoda]
          Length = 608

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 172 GPLASVVIPRPLPDGQPSPGVGKVFLEYV 258
           GPL +VVIPRP PDGQP+PG+GKVFLEYV
Sbjct: 539 GPLTTVVIPRPSPDGQPTPGLGKVFLEYV 567


>ref|XP_011625566.1| PREDICTED: splicing factor U2af large subunit B isoform X1
           [Amborella trichopoda]
          Length = 616

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 172 GPLASVVIPRPLPDGQPSPGVGKVFLEYV 258
           GPL +VVIPRP PDGQP+PG+GKVFLEYV
Sbjct: 547 GPLTTVVIPRPSPDGQPTPGLGKVFLEYV 575


>gb|ERM95215.1| hypothetical protein AMTR_s00009p00267190 [Amborella trichopoda]
          Length = 491

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 172 GPLASVVIPRPLPDGQPSPGVGKVFLEYV 258
           GPL +VVIPRP PDGQP+PG+GKVFLEYV
Sbjct: 422 GPLTTVVIPRPSPDGQPTPGLGKVFLEYV 450


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