BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00009882
         (495 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei...   152   9e-35
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]   152   1e-34
ref|XP_010097937.1| Retrovirus-related Pol polyprotein from tran...   140   5e-31
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   140   5e-31
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   139   8e-31
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   139   8e-31
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   129   7e-28
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]   129   7e-28
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   129   9e-28
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   129   9e-28
emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera]   128   2e-27
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               127   2e-27
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                127   2e-27
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   127   3e-27
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           126   6e-27
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        126   6e-27
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   125   2e-26
dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabido...   124   2e-26
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...   124   2e-26
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     124   3e-26

>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Erythranthe guttatus]
          Length = 598

 Score =  152 bits (384), Expect = 9e-35
 Identities = 80/129 (62%), Positives = 92/129 (71%), Gaps = 3/129 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERMN TLLE+VR ML SSGLPKLF GE ++TA +L+N SPS  LN   PE +W  K
Sbjct: 307 NGVAERMNRTLLERVRSMLTSSGLPKLFWGEAILTATYLINRSPSMPLNGDLPESVWCGK 366

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
           K D S L   G A +VH    KL PR +KC+FLGYP GVKGYRL  K   GYK+IISRDV
Sbjct: 367 KVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFLGYPDGVKGYRLWLKGDFGYKIIISRDV 426

Query: 139 IFDETFIPC 113
           IF+E+  PC
Sbjct: 427 IFNESGFPC 435


>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
          Length = 540

 Score =  152 bits (383), Expect = 1e-34
 Identities = 79/144 (54%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
 Frame = -3

Query: 481 AERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDKKSD 302
           A+RMN TLL+ VRCML SSGL K F GE VMT  +LVN +PS+ ++ K+ E +W  K S+
Sbjct: 283 AKRMNRTLLDGVRCMLYSSGLSKHFWGEAVMTTCYLVNRTPSSAIDLKTLEELWSGKPSN 342

Query: 301 YSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDVIFD 131
           Y  L   GC  YVHQ+EGKL  R+IKC+FLGYP GVKGY+L +KES G K+IISRDV+F+
Sbjct: 343 YDHLRIFGCTTYVHQSEGKLVTRSIKCIFLGYPEGVKGYKLWNKESSGVKIIISRDVVFN 402

Query: 130 ETFIPCKVTNSAGNEMSNKES*FT 59
           E  +    TN+AG +  +K    T
Sbjct: 403 ENEMLFMRTNTAGIKKDSKNKSLT 426


>ref|XP_010097937.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis] gi|587884397|gb|EXB73293.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Morus notabilis]
          Length = 1822

 Score =  140 bits (352), Expect = 5e-31
 Identities = 72/144 (50%), Positives = 91/144 (63%), Gaps = 3/144 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NG+AERMN TLLE+VRCML+ + LPK F GEVV TA +LVN  P   ++FK+PE +W D 
Sbjct: 48  NGLAERMNRTLLERVRCMLIEASLPKRFWGEVVNTAAYLVNRCPLAAIDFKTPEEVWTDY 107

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
             ++  L   GC  Y HQ EGKL PR  KC+F+GYP GVKGY+L  K     K  ISRDV
Sbjct: 108 PLNFENLKVFGCTAYAHQKEGKLDPRAKKCMFVGYPEGVKGYKLWCKYGNTSKSFISRDV 167

Query: 139 IFDETFIPCKVTNSAGNEMSNKES 68
           +F ET          G++ S  ++
Sbjct: 168 VFRETEYYMATMTQGGSDESGMDN 191


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  140 bits (352), Expect = 5e-31
 Identities = 70/124 (56%), Positives = 85/124 (68%), Gaps = 3/124 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NG+AERMN T+LE+VRCML SSGL K+F  E   TA+HL+N SPS+ L FK+P+  W  K
Sbjct: 551 NGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGK 610

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            +DY  L   GC  YVH    KL PR +KC+FLGYP GVKGY+L  +     K IISRDV
Sbjct: 611 AADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISRDV 670

Query: 139 IFDE 128
            F+E
Sbjct: 671 TFNE 674


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  139 bits (350), Expect = 8e-31
 Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490  NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
            NGVAERMN TL+++ RCM + +GL K F  E V TA +LVN SPST ++FK+P+ +W  K
Sbjct: 692  NGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGK 751

Query: 310  KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
             S+YS L   GC  Y H ++GKL PR +KC+FLGY +GVKGYRL   E +  K IISRDV
Sbjct: 752  PSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDV 811

Query: 139  IFDET 125
             FDE+
Sbjct: 812  TFDES 816


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  139 bits (350), Expect = 8e-31
 Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490  NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
            NGVAERMN TL+++ RCM + +GL K F  E V TA +LVN SPST ++FK+P+ +W  K
Sbjct: 905  NGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGK 964

Query: 310  KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
             S+YS L   GC  Y H ++GKL PR +KC+FLGY +GVKGYRL   E +  K IISRDV
Sbjct: 965  PSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDV 1024

Query: 139  IFDET 125
             FDE+
Sbjct: 1025 TFDES 1029


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  129 bits (325), Expect = 7e-28
 Identities = 67/125 (53%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGV ERMN T++ K RCML ++GLP+ F  E   TA +L+N SPS  ++ K+P  MW   
Sbjct: 532 NGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAIDKKTPIEMWSGS 591

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            ++YS L   GC  Y H   GKL PR IKC+FLGYPSGVK Y+L   E+Q  KV+ISR+V
Sbjct: 592 PANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLWCPETQ--KVVISRNV 649

Query: 139 IFDET 125
           IF+ET
Sbjct: 650 IFNET 654


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score =  129 bits (325), Expect = 7e-28
 Identities = 70/143 (48%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
 Frame = -3

Query: 490  NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
            NG+AERMN T+LE+VRCML S GL K+F  E V T +HL++ SPS+ L FK+P+  W  K
Sbjct: 585  NGLAERMNRTILERVRCMLSSLGLSKVFWVEAVETVVHLISRSPSSALQFKTPQEKWTGK 644

Query: 310  KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
              DY  L   GC  YVH    KL PR +KC+FLGYP GVKGY+L  K     K IIS+D 
Sbjct: 645  VVDYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIKTQGKEKCIISKDS 704

Query: 139  IFD-ETFIPCKVTNSAGNEMSNK 74
              + ET  P K T ++   +  +
Sbjct: 705  EMEYETSQPEKSTETSSETVQEE 727


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  129 bits (324), Expect = 9e-28
 Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490  NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
            NGVAERMN T++ K RC+L ++GLPK F  E V TA +L+N SPS  ++ K+P  +W   
Sbjct: 800  NGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 859

Query: 310  KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
             ++YS L   GC  Y H   GKL PR IKC+FLGYPSGVKGY+L   E++  KV+ISR+V
Sbjct: 860  PANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNV 917

Query: 139  IFDET 125
            +F E+
Sbjct: 918  VFHES 922


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  129 bits (324), Expect = 9e-28
 Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERMN T++ K RC+L ++GLPK F  E V TA +L+N SPS  ++ K+P  +W   
Sbjct: 593 NGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 652

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            ++YS L   GC  Y H   GKL PR IKC+FLGYPSGVKGY+L   E++  KV+ISR+V
Sbjct: 653 PANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNV 710

Query: 139 IFDET 125
           +F E+
Sbjct: 711 VFHES 715


>emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera]
          Length = 1017

 Score =  128 bits (321), Expect = 2e-27
 Identities = 64/112 (57%), Positives = 79/112 (70%), Gaps = 3/112 (2%)
 Frame = -3

Query: 400 EVVMTAIHLVNLSPSTILNFKSPEHMWLDKKSDYSKL---GCAPYVHQAEGKLGPRNIKC 230
           + VM   +LVN  PS+ +NFK+PE +W  K S+Y  L   GC  YVHQ+EGKL PR+IKC
Sbjct: 126 KAVMATCYLVNRIPSSAINFKTPEELWFGKPSNYDHLRIFGCITYVHQSEGKLKPRSIKC 185

Query: 229 VFLGYPSGVKGYRL*DKESQGYKVIISRDVIFDETFIPCKVTNSAGNEMSNK 74
           +FLGYP GVKGYRL  KES G K+IISRDV+F+E  I    TN+AG E  +K
Sbjct: 186 IFLGYPEGVKGYRLWYKESPGVKIIISRDVMFNENEILSMRTNTAGTEEDSK 237


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  127 bits (320), Expect = 2e-27
 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERMN T++ K RCML ++GLPK F  E V TA +L+N SP   ++ K+P  +W   
Sbjct: 410 NGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGS 469

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            ++YS L   GC  Y H   GKL PR IKC+FLGYPSGVKGY+L   E++  KV+ISR V
Sbjct: 470 PANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETK--KVVISRYV 527

Query: 139 IFDET 125
           +F E+
Sbjct: 528 VFHES 532


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  127 bits (320), Expect = 2e-27
 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERMN T++ K RCML ++GLPK F  E V TA +L+N SP   ++ K+P  +W   
Sbjct: 578 NGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGS 637

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            ++YS L   GC  Y H   GKL PR IKC+FLGYPSGVKGY+L   E++  KV+ISR V
Sbjct: 638 PANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETK--KVVISRYV 695

Query: 139 IFDET 125
           +F E+
Sbjct: 696 VFHES 700


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  127 bits (319), Expect = 3e-27
 Identities = 66/125 (52%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERMN T++ K RCML ++GLPK F  E V TA +L+N SPS  ++ K+P  +W   
Sbjct: 554 NGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGS 613

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            ++YS L   GC  Y H    KL PR IKC+FLGYPSGVKGY+L   E++  KV+ISR+V
Sbjct: 614 PANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNV 671

Query: 139 IFDET 125
           +F E+
Sbjct: 672 VFHES 676


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  126 bits (317), Expect = 6e-27
 Identities = 65/125 (52%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERMN T++ K RCML ++GLPK F  E V TA +L+N SPS  ++ K+P  +W   
Sbjct: 414 NGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSSS 473

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            + YS L    C  Y H   GKL PR IKC+FLGYPSGVKGY+L   E++  KV+I+R+V
Sbjct: 474 PAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVINRNV 531

Query: 139 IFDET 125
           +F E+
Sbjct: 532 VFHES 536


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  126 bits (317), Expect = 6e-27
 Identities = 66/127 (51%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NG+AERMN TL++K RCML++S LP+ F  E V TA +LVN SPS+ + FK+PE +W  K
Sbjct: 583 NGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELWNGK 642

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            ++Y  L   GC  Y+H  +GKL  R +K VF+GYP GVKGY++  K+ QG K I+SRDV
Sbjct: 643 PANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKD-QG-KCIVSRDV 700

Query: 139 IFDETFI 119
           +F E+ +
Sbjct: 701 VFHESVL 707


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  125 bits (313), Expect = 2e-26
 Identities = 66/146 (45%), Positives = 94/146 (64%), Gaps = 5/146 (3%)
 Frame = -3

Query: 490  NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
            NGVAERMN T++EKVRC+L  SG+ ++F  E   TA +L+N SP++ +N   PE MWL++
Sbjct: 598  NGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMWLNR 657

Query: 310  KSDYS---KLGCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            K  Y    K G   YVHQ +GKL PR +K  FLGYP+G KGY++   E +  K +ISR+V
Sbjct: 658  KPGYKHLRKFGSIAYVHQDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEE--KCVISRNV 715

Query: 139  IFDETFI--PCKVTNSAGNEMSNKES 68
            +F E+ +    KV     + ++ KE+
Sbjct: 716  VFQESVVYRDLKVKEDDTDNLNQKET 741


>dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1140

 Score =  124 bits (312), Expect = 2e-26
 Identities = 68/126 (53%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERMN TL+EKVRC+L  SGL + F  E   T  +LVN SP+++++   PE +WL K
Sbjct: 575 NGVAERMNRTLMEKVRCLLNESGLDESFWAEAASTTAYLVNRSPASVVDHNVPEELWLGK 634

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYR--L*DKESQGYKVIISR 146
           K  Y  L   G   YVHQ +GKL PR +K VFLGYP GVKGY+  L D+E    K +ISR
Sbjct: 635 KPGYKHLRRFGSIAYVHQDQGKLKPRALKGVFLGYPQGVKGYKVWLLDEE----KCVISR 690

Query: 145 DVIFDE 128
           +V+FDE
Sbjct: 691 NVVFDE 696


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549746|gb|ABA92543.1|
           retrotransposon protein, putative, Ty1-copia subclass,
           expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score =  124 bits (312), Expect = 2e-26
 Identities = 66/125 (52%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
 Frame = -3

Query: 490 NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
           NGVAERM  T++ K RCML   GLPK F  E V TA +L+N SPS  ++ K+P  +W   
Sbjct: 628 NGVAERMKRTIISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 687

Query: 310 KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
            ++YS L   GC  Y H   GKL PR IKC+FLGYPSGVKGY+L   E++  KV+ISR+V
Sbjct: 688 PANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNV 745

Query: 139 IFDET 125
           +F E+
Sbjct: 746 VFHES 750


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  124 bits (311), Expect = 3e-26
 Identities = 65/127 (51%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
 Frame = -3

Query: 490  NGVAERMNSTLLEKVRCMLVSSGLPKLF*GEVVMTAIHLVNLSPSTILNFKSPEHMWLDK 311
            NGVAERMN  ++ K RCML ++ LPK F  E V T  +L+N SPS   + K+P  +W   
Sbjct: 628  NGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGS 687

Query: 310  KSDYSKL---GCAPYVHQAEGKLGPRNIKCVFLGYPSGVKGYRL*DKESQGYKVIISRDV 140
             ++YS L   GC  Y H   GKL PR IKC+FLGYPSGVKGY+L   E++  KV+ISR+V
Sbjct: 688  PANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNV 745

Query: 139  IFDETFI 119
            +F E+ I
Sbjct: 746  VFHESVI 752