BLASTX nr result

ID: Ziziphus21_contig00008139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00008139
         (1014 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]       63   3e-07
gb|ACB28471.1| polyprotein, partial [Ananas comosus]                   61   1e-06
gb|ACB28470.1| polyprotein, partial [Ananas comosus]                   61   1e-06

>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
          Length = 2027

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 33/101 (32%), Positives = 55/101 (54%)
 Frame = +3

Query: 9    QRALINSIWNKTHFESSDEKTDFIQTLDNLCFYLQSIKQKPDSKYYSHYILLTGPNPGLY 188
            Q+ L+++IWN    +S  +K   +Q L     Y+ SI++KP SK +SHY++  G N G++
Sbjct: 1464 QQVLLDNIWN---CKSVFQKQKCLQALSQ---YMSSIQKKPASKNFSHYVVTQGSNTGVF 1517

Query: 189  KTWSQIAHEIAGQINTQYRGYYSLHEALEITYRELGPKAFI 311
              W+     I G     Y+G+Y++ EAL      LG   ++
Sbjct: 1518 VKWASAKRAIEGHDWPCYKGFYTMEEALAYARERLGHNFYV 1558


>gb|ACB28471.1| polyprotein, partial [Ananas comosus]
          Length = 546

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
 Frame = +3

Query: 9   QRALINSIWNKTHFESSDEKTD---FIQTLDNLCFYLQSIKQKPDSKYYSHYILLTGPNP 179
           Q+ LI+++W   H  S+ ++ D   F+  +++L  Y Q++K K     +  Y++L G   
Sbjct: 350 QKCLIDNLWLCYHRTSNHQEPDKKYFVACINSLIEYFQTVKPKDS---FPFYVVLQGFKT 406

Query: 180 GLYKTWSQIAHEIAGQINTQYRGYYSLHEALEITYRELGPKAFIHPWVRMDP 335
           G++ +W  +  ++    +  Y+G++S+ EAL+      GP  FI P +R  P
Sbjct: 407 GIFDSWIDVITQLKNFPHPLYKGFHSISEALDTARTYFGPNFFISPNIRSSP 458


>gb|ACB28470.1| polyprotein, partial [Ananas comosus]
          Length = 551

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
 Frame = +3

Query: 9   QRALINSIWNKTHFESSDEKTD---FIQTLDNLCFYLQSIKQKPDSKYYSHYILLTGPNP 179
           Q+ LI+++W   H  S+ ++ D   F+  +++L  Y Q++K K     +  Y++L G   
Sbjct: 355 QKCLIDNLWLCYHRTSNHQEPDKKYFVACINSLIEYFQTVKPKDS---FPFYVVLQGFKT 411

Query: 180 GLYKTWSQIAHEIAGQINTQYRGYYSLHEALEITYRELGPKAFIHPWVRMDP 335
           G++ +W  +  ++    +  Y+G++S+ EAL+      GP  FI P +R  P
Sbjct: 412 GIFDSWIDVITQLKNFPHPLYKGFHSISEALDTARTYFGPNFFISPNIRSSP 463


Top