BLASTX nr result
ID: Ziziphus21_contig00007913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00007913
(496 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHG19892.1| 50S ribosomal L28, chloroplastic [Gossypium arbor... 172 7e-41
ref|XP_007035202.1| Ribosomal L28 family [Theobroma cacao] gi|50... 170 3e-40
ref|XP_012482006.1| PREDICTED: 50S ribosomal protein L28, chloro... 170 4e-40
gb|KHG06244.1| 50S ribosomal L28, chloroplastic [Gossypium arbor... 168 2e-39
ref|XP_012457092.1| PREDICTED: 50S ribosomal protein L28, chloro... 166 8e-39
ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Popu... 165 1e-38
ref|XP_010023876.1| PREDICTED: 50S ribosomal protein L28, chloro... 164 2e-38
ref|XP_011030453.1| PREDICTED: 50S ribosomal protein L28, chloro... 164 3e-38
ref|XP_010522468.1| PREDICTED: 50S ribosomal protein L28, chloro... 164 3e-38
ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Popu... 164 3e-38
gb|ABK95755.1| unknown [Populus trichocarpa] 164 3e-38
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides] 164 3e-38
emb|CBI23685.3| unnamed protein product [Vitis vinifera] 163 4e-38
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro... 163 4e-38
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro... 163 4e-38
ref|XP_008438484.1| PREDICTED: 50S ribosomal protein L28, chloro... 163 5e-38
gb|KNA16864.1| hypothetical protein SOVF_085320 [Spinacia oleracea] 162 9e-38
ref|XP_009795876.1| PREDICTED: 50S ribosomal protein L28, chloro... 162 1e-37
ref|XP_009630927.1| PREDICTED: 50S ribosomal protein L28, chloro... 162 1e-37
ref|XP_006857446.1| PREDICTED: 50S ribosomal protein L28, chloro... 162 1e-37
>gb|KHG19892.1| 50S ribosomal L28, chloroplastic [Gossypium arboreum]
Length = 145
Score = 172 bits (437), Expect = 7e-41
Identities = 85/90 (94%), Positives = 86/90 (95%)
Frame = -3
Query: 494 IVTSFKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 315
I + F PA QPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK
Sbjct: 56 ISSPFTPALQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 115
Query: 314 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
LRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 116 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 145
>ref|XP_007035202.1| Ribosomal L28 family [Theobroma cacao] gi|508714231|gb|EOY06128.1|
Ribosomal L28 family [Theobroma cacao]
Length = 144
Score = 170 bits (431), Expect = 3e-40
Identities = 83/90 (92%), Positives = 85/90 (94%)
Frame = -3
Query: 494 IVTSFKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 315
I F PA +PVARR+CPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK
Sbjct: 55 ISAPFTPALRPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 114
Query: 314 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
LRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 115 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 144
>ref|XP_012482006.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Gossypium
raimondii] gi|763761136|gb|KJB28390.1| hypothetical
protein B456_005G052000 [Gossypium raimondii]
Length = 145
Score = 170 bits (430), Expect = 4e-40
Identities = 84/90 (93%), Positives = 85/90 (94%)
Frame = -3
Query: 494 IVTSFKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 315
I + F PA PVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK
Sbjct: 56 ISSPFTPALLPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 115
Query: 314 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
LRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 116 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 145
>gb|KHG06244.1| 50S ribosomal L28, chloroplastic [Gossypium arboreum]
Length = 144
Score = 168 bits (425), Expect = 2e-39
Identities = 82/90 (91%), Positives = 85/90 (94%)
Frame = -3
Query: 494 IVTSFKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 315
I + F P+ QPVARR+CPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK
Sbjct: 55 ISSPFTPSLQPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 114
Query: 314 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
LRLSTKALKTIEKNGLDAVAKKAGIDL KE
Sbjct: 115 LRLSTKALKTIEKNGLDAVAKKAGIDLCKE 144
>ref|XP_012457092.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Gossypium
raimondii] gi|763805480|gb|KJB72418.1| hypothetical
protein B456_011G177300 [Gossypium raimondii]
gi|763805481|gb|KJB72419.1| hypothetical protein
B456_011G177300 [Gossypium raimondii]
Length = 143
Score = 166 bits (419), Expect = 8e-39
Identities = 83/90 (92%), Positives = 84/90 (93%)
Frame = -3
Query: 494 IVTSFKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 315
I F P QPVARR+CPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK
Sbjct: 55 ISAPFTP-LQPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 113
Query: 314 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
LRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 114 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 143
>ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Populus trichocarpa]
gi|550333255|gb|EEE89957.2| hypothetical protein
POPTR_0008s16970g [Populus trichocarpa]
Length = 104
Score = 165 bits (418), Expect = 1e-38
Identities = 82/91 (90%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Frame = -3
Query: 494 IVTSFKPAFQP-VARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYV 318
+ F PA QP VARRICPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYK+VWWEAGKRYV
Sbjct: 14 LTAPFTPAIQPLVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYV 73
Query: 317 KLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
KLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 74 KLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 104
>ref|XP_010023876.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Eucalyptus
grandis] gi|629094289|gb|KCW60284.1| hypothetical
protein EUGRSUZ_H02995 [Eucalyptus grandis]
Length = 151
Score = 164 bits (415), Expect = 2e-38
Identities = 79/83 (95%), Positives = 82/83 (98%)
Frame = -3
Query: 473 AFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKA 294
A QPVARRICPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYK++WWEAGKRYVKLRLSTKA
Sbjct: 69 AVQPVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKA 128
Query: 293 LKTIEKNGLDAVAKKAGIDLRKE 225
LKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 129 LKTIEKNGLDAVAKKAGIDLRKE 151
>ref|XP_011030453.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Populus
euphratica]
Length = 153
Score = 164 bits (414), Expect = 3e-38
Identities = 81/87 (93%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
Frame = -3
Query: 482 FKPAFQPV-ARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRL 306
F PA QPV ARRICPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYK+VWWEAGKRYVKLRL
Sbjct: 67 FSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRL 126
Query: 305 STKALKTIEKNGLDAVAKKAGIDLRKE 225
STKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 127 STKALKTIEKNGLDAVAKKAGIDLRKK 153
>ref|XP_010522468.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Tarenaya
hassleriana]
Length = 146
Score = 164 bits (414), Expect = 3e-38
Identities = 82/85 (96%), Positives = 83/85 (97%), Gaps = 1/85 (1%)
Frame = -3
Query: 476 PAFQP-VARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLST 300
PA QP VARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLST
Sbjct: 62 PALQPIVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLST 121
Query: 299 KALKTIEKNGLDAVAKKAGIDLRKE 225
KALKTIEKNGL+AVAKKAGIDLRKE
Sbjct: 122 KALKTIEKNGLEAVAKKAGIDLRKE 146
>ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Populus trichocarpa]
gi|550329333|gb|EEF01745.2| hypothetical protein
POPTR_0010s07920g [Populus trichocarpa]
Length = 153
Score = 164 bits (414), Expect = 3e-38
Identities = 81/87 (93%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
Frame = -3
Query: 482 FKPAFQPV-ARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRL 306
F PA QPV ARRICPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYK+VWWEAGKRYVKLRL
Sbjct: 67 FSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRL 126
Query: 305 STKALKTIEKNGLDAVAKKAGIDLRKE 225
STKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 127 STKALKTIEKNGLDAVAKKAGIDLRKK 153
>gb|ABK95755.1| unknown [Populus trichocarpa]
Length = 150
Score = 164 bits (414), Expect = 3e-38
Identities = 81/87 (93%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
Frame = -3
Query: 482 FKPAFQPV-ARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRL 306
F PA QPV ARRICPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYK+VWWEAGKRYVKLRL
Sbjct: 64 FSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRL 123
Query: 305 STKALKTIEKNGLDAVAKKAGIDLRKE 225
STKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 124 STKALKTIEKNGLDAVAKKAGIDLRKK 150
>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 153
Score = 164 bits (414), Expect = 3e-38
Identities = 81/87 (93%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
Frame = -3
Query: 482 FKPAFQPV-ARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRL 306
F PA QPV ARRICPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYK+VWWEAGKRYVKLRL
Sbjct: 67 FSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRL 126
Query: 305 STKALKTIEKNGLDAVAKKAGIDLRKE 225
STKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 127 STKALKTIEKNGLDAVAKKAGIDLRKK 153
>emb|CBI23685.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 163 bits (413), Expect = 4e-38
Identities = 78/81 (96%), Positives = 81/81 (100%)
Frame = -3
Query: 467 QPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALK 288
+PVARR+CPFTGKKANKANKVSFSNHKTKKLQFVNLQYKK+WWEAGKRYVKLRLSTKALK
Sbjct: 38 RPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALK 97
Query: 287 TIEKNGLDAVAKKAGIDLRKE 225
TIEKNGLDAVAKKAGIDLRKE
Sbjct: 98 TIEKNGLDAVAKKAGIDLRKE 118
>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Cucumis
sativus] gi|700201700|gb|KGN56833.1| hypothetical
protein Csa_3G134810 [Cucumis sativus]
Length = 150
Score = 163 bits (413), Expect = 4e-38
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = -3
Query: 479 KPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLST 300
+P+ QPVARRICPFTGKKANK N VSFSNHKTKKLQFVNLQYKKVWWEAGKR+VKLRLST
Sbjct: 66 RPSLQPVARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLST 125
Query: 299 KALKTIEKNGLDAVAKKAGIDLRKE 225
KALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 126 KALKTIEKNGLDAVAKKAGIDLRKE 150
>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
vinifera]
Length = 146
Score = 163 bits (413), Expect = 4e-38
Identities = 78/81 (96%), Positives = 81/81 (100%)
Frame = -3
Query: 467 QPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALK 288
+PVARR+CPFTGKKANKANKVSFSNHKTKKLQFVNLQYKK+WWEAGKRYVKLRLSTKALK
Sbjct: 66 RPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALK 125
Query: 287 TIEKNGLDAVAKKAGIDLRKE 225
TIEKNGLDAVAKKAGIDLRKE
Sbjct: 126 TIEKNGLDAVAKKAGIDLRKE 146
>ref|XP_008438484.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Cucumis melo]
Length = 150
Score = 163 bits (412), Expect = 5e-38
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = -3
Query: 479 KPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLST 300
+P+ QP+ARRICPFTGKKANK N VSFSNHKTKKLQFVNLQYKKVWWEAGKR+VKLRLST
Sbjct: 66 RPSLQPIARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLST 125
Query: 299 KALKTIEKNGLDAVAKKAGIDLRKE 225
KALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 126 KALKTIEKNGLDAVAKKAGIDLRKE 150
>gb|KNA16864.1| hypothetical protein SOVF_085320 [Spinacia oleracea]
Length = 148
Score = 162 bits (410), Expect = 9e-38
Identities = 78/90 (86%), Positives = 84/90 (93%)
Frame = -3
Query: 494 IVTSFKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 315
I KP+ QPVARRICPFTGKK+NKAN+VS SNHKTK+LQFVNLQYK+VWWEAGKR+VK
Sbjct: 59 ISAPLKPSLQPVARRICPFTGKKSNKANRVSHSNHKTKRLQFVNLQYKRVWWEAGKRFVK 118
Query: 314 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
LRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 119 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 148
>ref|XP_009795876.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Nicotiana
sylvestris]
Length = 151
Score = 162 bits (409), Expect = 1e-37
Identities = 76/86 (88%), Positives = 83/86 (96%)
Frame = -3
Query: 482 FKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLS 303
FKP+ QPVARRICPFTGKK+N+ANKVS SNHKTKKLQFVNLQYK++WWEAGKRYVKLRLS
Sbjct: 66 FKPSLQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLS 125
Query: 302 TKALKTIEKNGLDAVAKKAGIDLRKE 225
TKA+KTIEKNGLDAVAKKAGIDL K+
Sbjct: 126 TKAIKTIEKNGLDAVAKKAGIDLSKK 151
>ref|XP_009630927.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Nicotiana
tomentosiformis] gi|400992|sp|P30956.1|RK28_TOBAC
RecName: Full=50S ribosomal protein L28, chloroplastic;
AltName: Full=CL28; Flags: Precursor
gi|279656|pir||R5NT28 ribosomal protein L28 precursor,
chloroplast - tobacco gi|189096147|pdb|3BBO|Y Chain Y,
Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|20016|emb|CAA48211.1| ribosomal protein CL28
[Nicotiana tabacum]
Length = 151
Score = 162 bits (409), Expect = 1e-37
Identities = 76/86 (88%), Positives = 83/86 (96%)
Frame = -3
Query: 482 FKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLS 303
FKP+ QPVARRICPFTGKK+N+ANKVS SNHKTKKLQFVNLQYK++WWEAGKRYVKLRLS
Sbjct: 66 FKPSLQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLS 125
Query: 302 TKALKTIEKNGLDAVAKKAGIDLRKE 225
TKA+KTIEKNGLDAVAKKAGIDL K+
Sbjct: 126 TKAIKTIEKNGLDAVAKKAGIDLSKK 151
>ref|XP_006857446.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Amborella
trichopoda] gi|548861539|gb|ERN18913.1| hypothetical
protein AMTR_s00067p00174670 [Amborella trichopoda]
Length = 162
Score = 162 bits (409), Expect = 1e-37
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = -3
Query: 494 IVTSFKPAFQPVARRICPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVK 315
+ T+++ QPVARR+C FTGKKAN+ANKVSFSNHKTKKLQFVNLQYK+VWWEAGKRY+K
Sbjct: 73 VSTTYRRMIQPVARRVCRFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYLK 132
Query: 314 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 225
LRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 133 LRLSTKALKTIEKNGLDAVAKKAGIDLRKE 162