BLASTX nr result
ID: Ziziphus21_contig00007837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00007837
(1232 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008232397.1| PREDICTED: pentatricopeptide repeat-containi... 690 0.0
ref|XP_008344150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 689 0.0
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part... 689 0.0
ref|XP_010103831.1| hypothetical protein L484_024133 [Morus nota... 676 0.0
emb|CBI39452.3| unnamed protein product [Vitis vinifera] 665 0.0
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi... 665 0.0
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,... 662 0.0
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam... 655 0.0
ref|XP_010052040.1| PREDICTED: pentatricopeptide repeat-containi... 655 0.0
gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum] 652 0.0
ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containi... 651 0.0
gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium r... 651 0.0
ref|XP_008444214.1| PREDICTED: pentatricopeptide repeat-containi... 651 0.0
ref|XP_011470532.1| PREDICTED: pentatricopeptide repeat-containi... 650 0.0
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi... 647 0.0
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu... 644 0.0
ref|XP_012083857.1| PREDICTED: pentatricopeptide repeat-containi... 644 0.0
ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containi... 644 0.0
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera] 627 e-177
ref|XP_010252151.1| PREDICTED: pentatricopeptide repeat-containi... 620 e-175
>ref|XP_008232397.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Prunus mume]
Length = 1150
Score = 690 bits (1781), Expect = 0.0
Identities = 336/410 (81%), Positives = 378/410 (92%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLEDRFFNSLIRNYGRAGLFQES+K+F TMKSLGVSPSV++FNSLLSILLK+GRTNM
Sbjct: 161 GAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNM 220
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+N+YDEMLS YGVTPDTYTFNILIRGFCMNSMVDEG+RFF+++S F+C+PDVITYNT+V
Sbjct: 221 AKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLV 280
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV+IA NVVKGMS +S DL PNVVTYTTLIRG+C+KQEID AL +LEE+ +RG
Sbjct: 281 DGLCRAGKVEIAHNVVKGMSKRSGDLTPNVVTYTTLIRGYCVKQEIDKALCILEEITTRG 340
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN TYNTLIKGLCEAQ+ DKIKEILEGT+ G F PDTCTFNTLMH+HCN+GNLDEA
Sbjct: 341 LKPNGFTYNTLIKGLCEAQKLDKIKEILEGTMIGGEFIPDTCTFNTLMHSHCNAGNLDEA 400
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LKVFAKMSEL+V PDSATYSVLIRSLCQ+GDY RAE+L DEL++KEILL D GC+PLVA+
Sbjct: 401 LKVFAKMSELKVPPDSATYSVLIRSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVAS 460
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNP+F YL NGKT+KAE +FRQLM+RGTQDP S+KT+IMG+CKEGT+EAGYELLV MLR
Sbjct: 461 YNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLR 520
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDFVPD EIY SLIDGLLQKGKPLLAQQTLEKMLKSSHLP+TS FHS+LA
Sbjct: 521 RDFVPDEEIYVSLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHSLLA 570
Score = 83.6 bits (205), Expect = 3e-13
Identities = 93/437 (21%), Positives = 171/437 (39%), Gaps = 42/437 (9%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEML 1026
+ +LIR Y ++L + + + G+ P+ T+N+L+ L + + + + + + +
Sbjct: 313 YTTLIRGYCVKQEIDKALCILEEITTRGLKPNGFTYNTLIKGLCEAQKLDKIKEILEGTM 372
Query: 1025 STYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGKV 846
PDT TFN L+ C +DE + F ++S K PD TY+ ++ LC+ G
Sbjct: 373 IGGEFIPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLIRSLCQRGDY 432
Query: 845 DIARNVVKGMSNKS---RD---------LNP---------------------------NV 783
A + +S K RD NP +
Sbjct: 433 PRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDP 492
Query: 782 VTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPNRITYNTLIKGLCEAQRFDKIKEILEG 603
++Y TLI G C + + +L M+ R P+ Y +LI GL + + ++ LE
Sbjct: 493 LSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPDEEIYVSLIDGLLQKGKPLLAQQTLE- 551
Query: 602 TVTHGGFTPDTCTFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQG 423
+ P T TF++L+ E+ M E +++ + + L+R L +G
Sbjct: 552 KMLKSSHLPQTSTFHSLLAELLKQHCARESASFVTLMLEKKIRQNINLSTHLVRLLFSRG 611
Query: 422 DYDRAEKLSDELAEK--EILLNDAGCRPLVAAYNPMFEYLCRNGKTRKA-EGIFRQLMKR 252
D+A ++ L E I + + C +LC++ K +A E + L K
Sbjct: 612 LRDKAFEIVAMLYENGYSIKMEELVC------------FLCQSRKLLEACEMLQFSLQKH 659
Query: 251 GTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLRRDFVPDAEIYESLIDGLLQKGKPLLAQ 72
+ +F +I+G C + L ++ +SL L G+
Sbjct: 660 QSVVIDNFNQVIVGLCDINKLSEAFGLYYELVENKGYQQLPCLDSLKSALEVAGR----- 714
Query: 71 QTLEKMLKSSHLPRTSI 21
++E S +PR +
Sbjct: 715 -SVEAEFLSKRIPRQQL 730
>ref|XP_008344150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic [Malus domestica]
Length = 1210
Score = 689 bits (1779), Expect = 0.0
Identities = 334/410 (81%), Positives = 375/410 (91%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLEDRFFNSLIRNYGRAGLFQES+K+F+TMKS+GVSPSV++FNSLL ILL++GRTNM
Sbjct: 159 GAVKLEDRFFNSLIRNYGRAGLFQESIKLFSTMKSIGVSPSVVSFNSLLXILLRKGRTNM 218
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+N+YDEM+S YG TPDT TFN LIRGFCMNSMVDEGFRFF+E+SRFKC+PDVITYNT+V
Sbjct: 219 AKNVYDEMVSMYGATPDTCTFNTLIRGFCMNSMVDEGFRFFKEMSRFKCDPDVITYNTLV 278
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV IA NVVKGMS +S DLNPN+VTYTTLIRG+CMKQEID+AL VLEEM S+G
Sbjct: 279 DGLCRAGKVGIAHNVVKGMSKRSADLNPNIVTYTTLIRGYCMKQEIDEALCVLEEMTSQG 338
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN IT NTLIKGLCEA + DKIK+ILEGT++ G FTPDTCTFNTLMH+HCN+GNLDEA
Sbjct: 339 LKPNGITCNTLIKGLCEAHKLDKIKDILEGTMSGGEFTPDTCTFNTLMHSHCNAGNLDEA 398
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LKVFAKMSEL+V PDSATYSVLIRSLCQ+GDY RAE+L DEL++KEILL+D GC+PLVA+
Sbjct: 399 LKVFAKMSELKVPPDSATYSVLIRSLCQRGDYSRAEELFDELSKKEILLSDDGCKPLVAS 458
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNP+FEYLC GK +KAE +FRQLM+RGTQDP S+KT+IMGHCKEGTFE GYELLV MLR
Sbjct: 459 YNPIFEYLCSKGKIKKAEAVFRQLMRRGTQDPVSYKTLIMGHCKEGTFETGYELLVWMLR 518
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDFVPD EIYESLI GLLQKGK LLAQQTLEKMLKSSHLP+T FH ILA
Sbjct: 519 RDFVPDVEIYESLIGGLLQKGKALLAQQTLEKMLKSSHLPKTCTFHCILA 568
Score = 102 bits (253), Expect = 9e-19
Identities = 106/454 (23%), Positives = 184/454 (40%), Gaps = 67/454 (14%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEML 1026
+ +LIR Y E+L V M S G+ P+ IT N+L+ L + + + +++ + +
Sbjct: 311 YTTLIRGYCMKQEIDEALCVLEEMTSQGLKPNGITCNTLIKGLCEAHKLDKIKDILEGTM 370
Query: 1025 STYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGKV 846
S TPDT TFN L+ C +DE + F ++S K PD TY+ ++ LC+ G
Sbjct: 371 SGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLIRSLCQRGDY 430
Query: 845 DIARNVVKGMSNKSRDLN-----PNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPN 681
A + +S K L+ P V +Y + C K +I A +V +++ RG + +
Sbjct: 431 SRAEELFDELSKKEILLSDDGCKPLVASYNPIFEYLCSKGKIKKAEAVFRQLMRRGTQ-D 489
Query: 680 RITYNTLIKGLCEAQRFD------------------KIKEILEGTVTHGG---------- 585
++Y TLI G C+ F+ +I E L G + G
Sbjct: 490 PVSYKTLIMGHCKEGTFETGYELLVWMLRRDFVPDVEIYESLIGGLLQKGKALLAQQTLE 549
Query: 584 ------FTPDTCTFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQG 423
P TCTF+ ++ E+ M E +++ + + L+R L G
Sbjct: 550 KMLKSSHLPKTCTFHCILAELLEKNCALESANCVILMLERKIRQNINLSTHLVRLLFSSG 609
Query: 422 DYDRA----------------EKLSDELAEKEILLNDAGCRPL-----------VAAYNP 324
D+A E++ L ++ LL+ C+ L + +N
Sbjct: 610 LRDKAFXIVGMLHXNGYSIKMEEVVHFLCQRRKLLD--ACKMLQFSLQKHQSVSIDIFNQ 667
Query: 323 MFEYLCRNGKTRKAEGIFRQLMKR-GTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLRRD 147
+ E LC K +A G++ +L++ G Q P G+ ++ E+ + +
Sbjct: 668 VIEGLCNINKPSEAFGLYYELVENAGYQQFPCL----------GSLKSALEIAGXSVEAE 717
Query: 146 FVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKS 45
F L KG P +Q+L+K +S
Sbjct: 718 F--------------LSKGMP--GEQSLDKSXRS 735
>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
gi|462415618|gb|EMJ20355.1| hypothetical protein
PRUPE_ppa016282mg, partial [Prunus persica]
Length = 721
Score = 689 bits (1779), Expect = 0.0
Identities = 336/410 (81%), Positives = 377/410 (91%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLEDRFFNSLIRNYGRAGLFQES+K+F TMKSLGVSPSV++FNSLLSILLK+GRTNM
Sbjct: 142 GAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNM 201
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+N+YDEMLS YGVTPDTYTFNILIRGFCMNSMVDEG+RFF+++S F+C+PDVITYNT+V
Sbjct: 202 AKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLV 261
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV+IA NVV GMS +S DL PNVVTYTTLIRG+C+KQEID ALS+LEEM +RG
Sbjct: 262 DGLCRAGKVEIAHNVVNGMSKRSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRG 321
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN TYNTLIKGLCEAQ+ DKIKEI EGT+ G FTPDTCTFNTLMH+HCN+GNLDEA
Sbjct: 322 LKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGNLDEA 381
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LKVFAKMSEL+V PDSATYSVLI SLCQ+GDY RAE+L DEL++KEILL D GC+PLVA+
Sbjct: 382 LKVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVAS 441
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNP+F YL NGKT+KAE +FRQLM+RGTQDP S+KT+IMG+CKEGT+EAGYELLV MLR
Sbjct: 442 YNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLR 501
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDFVPD EIY SLIDGLLQKGKPLLAQQTLEKMLKSSHLP+TS FHS+LA
Sbjct: 502 RDFVPDEEIYVSLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHSLLA 551
Score = 94.4 bits (233), Expect = 2e-16
Identities = 99/438 (22%), Positives = 174/438 (39%), Gaps = 51/438 (11%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEML 1026
+ +LIR Y ++L + M + G+ P+ T+N+L+ L + + + + +++ +
Sbjct: 294 YTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTM 353
Query: 1025 STYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGKV 846
TPDT TFN L+ C +DE + F ++S K PD TY+ ++ LC+ G
Sbjct: 354 IGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDY 413
Query: 845 DIARNVVKGMSNKS---RD---------LNP---------------------------NV 783
A + +S K RD NP +
Sbjct: 414 PRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDP 473
Query: 782 VTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPNRITYNTLIKGLCEAQRFDKIKEILEG 603
++Y TLI G C + + +L M+ R P+ Y +LI GL + + ++ LE
Sbjct: 474 LSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPDEEIYVSLIDGLLQKGKPLLAQQTLE- 532
Query: 602 TVTHGGFTPDTCTFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQG 423
+ P T TF++L+ E+ M E +++ + + L+R L G
Sbjct: 533 KMLKSSHLPQTSTFHSLLAELLKQHCAHESASFVTLMLEKKIRQNINLSTHLVRLLFSHG 592
Query: 422 DYDRAEKLSDELAEK--EILLNDAGCRPLVAAYNPMFEYLCRNGKTRKA-EGIFRQLMKR 252
D+A ++ L E I + + C +LC++ K +A E + L K
Sbjct: 593 LRDKAFEIVGMLYENGYSIKMEELVC------------FLCQSRKLLEACEMLQFSLQKH 640
Query: 251 GTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLRRDFVPDAEIYESLIDGLLQKGKPLLA- 75
+ D +F +I+G C + L ++ +SL L G+ + A
Sbjct: 641 QSVDIDNFNQVIVGLCDINKLSEAFGLYYELVENKGYQQLPCLDSLKSALEVAGRSVEAE 700
Query: 74 --------QQTLEKMLKS 45
QQ L+K KS
Sbjct: 701 FLSKRIPRQQLLDKFGKS 718
>ref|XP_010103831.1| hypothetical protein L484_024133 [Morus notabilis]
gi|587909359|gb|EXB97272.1| hypothetical protein
L484_024133 [Morus notabilis]
Length = 786
Score = 676 bits (1743), Expect = 0.0
Identities = 325/409 (79%), Positives = 370/409 (90%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLEDRFFNSLIR+YG AGLFQES+K+F+TMK L ++PSV+TFNSLL +LLKRGRTNM
Sbjct: 202 GSVKLEDRFFNSLIRSYGNAGLFQESVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNM 261
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
ARN++DEML TYGV PDT+TFN+LIRGFCMNSMVDEGF FF+E+SRFKCEPDV+TYNT+V
Sbjct: 262 ARNVFDEMLGTYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLV 321
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKVDIARNVVKGMS KS DLNPN+VTYTTLI+G+C KQEID+AL VL+EM RG
Sbjct: 322 DGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERG 381
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN ITYNTLIKGLCEAQ+ D +++IL+GT+ G F P+TCTFNTL+H HC +G LDEA
Sbjct: 382 LKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAGRLDEA 441
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LKVF KM ELQV DSATYS LIRSLCQ+GDY RAE+L D+L++KEILL+D GCRP+VAA
Sbjct: 442 LKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVAA 501
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFE+LCRNGKT+KAE +FRQLMKRGTQDPPS+KT+IMGHC+EGTFEAGYELLVLMLR
Sbjct: 502 YNPMFEHLCRNGKTKKAERVFRQLMKRGTQDPPSYKTLIMGHCREGTFEAGYELLVLMLR 561
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSIL 6
RDFVPDAEIYESLI GLLQK KPLLA+ TLEKML+SSHLPR S FH IL
Sbjct: 562 RDFVPDAEIYESLITGLLQKDKPLLAKTTLEKMLRSSHLPRASAFHCIL 610
>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 665 bits (1715), Expect = 0.0
Identities = 322/410 (78%), Positives = 369/410 (90%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKL DRFFNSLIR+YG AGLFQES+KVF TMK +GVSPSV+TFNSLLSI+LKRGRT+M
Sbjct: 159 GAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSM 218
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+ L+DEML TYGVTPDTYTFNILIRGFCMNSMVDEGF FF+E+SRFKC+PDV+TYNT+V
Sbjct: 219 AKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLV 278
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV IA NVVKGM KS +L+PNVVTYTTLIRG+CMKQ++ +ALS+L EM+SRG
Sbjct: 279 DGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRG 338
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN+ITYNTLI+GLCEAQ+ DKIKEILEG V GGF PDTCT NTL+ AHC G L+EA
Sbjct: 339 LKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEA 398
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
VF KMSEL+VQPDSATYSVL+RSLCQ+GD+ RAE+ DELAEKEILL+D GC+PLVAA
Sbjct: 399 FSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAA 458
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFEYLC NGKT+KAE +FRQLMKRGTQDPPS+KT+I+GHC+EGT EAG++LLVLMLR
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLR 518
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDFVPDAE Y +IDGLL+KG P+LA ++LEKMLKSSHLP T+IFHSILA
Sbjct: 519 RDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILA 568
Score = 83.2 bits (204), Expect = 4e-13
Identities = 74/285 (25%), Positives = 119/285 (41%), Gaps = 10/285 (3%)
Frame = -1
Query: 1202 NSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEM-- 1029
N+LI+ + G +E+ VF M L V P T++ L+ L +RG A +DE+
Sbjct: 383 NTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE 442
Query: 1028 ----LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLC 861
L G P +N + C N + R F+++ + + D +Y T++ G C
Sbjct: 443 KEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMK-RGTQDPPSYKTLILGHC 501
Query: 860 RAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPN 681
R G + +++ M RD P+ TY +I G K + A LE+M+ P
Sbjct: 502 REGTPEAGFDLLVLMLR--RDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPT 559
Query: 680 RITYNTLIKGL----CEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
+++++ L C + +K +LE + T T L+ C S L EA
Sbjct: 560 TAIFHSILAALVEKGCAHESASLVKLMLERRIRQN-IDLSTHTMEELVSFLCQSRKLLEA 618
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEK 378
K+ E + D S +I LC+ A L EL EK
Sbjct: 619 QKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEK 663
>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera]
gi|731390607|ref|XP_010650422.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera]
Length = 746
Score = 665 bits (1715), Expect = 0.0
Identities = 322/410 (78%), Positives = 369/410 (90%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKL DRFFNSLIR+YG AGLFQES+KVF TMK +GVSPSV+TFNSLLSI+LKRGRT+M
Sbjct: 159 GAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSM 218
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+ L+DEML TYGVTPDTYTFNILIRGFCMNSMVDEGF FF+E+SRFKC+PDV+TYNT+V
Sbjct: 219 AKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLV 278
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV IA NVVKGM KS +L+PNVVTYTTLIRG+CMKQ++ +ALS+L EM+SRG
Sbjct: 279 DGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRG 338
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN+ITYNTLI+GLCEAQ+ DKIKEILEG V GGF PDTCT NTL+ AHC G L+EA
Sbjct: 339 LKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEA 398
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
VF KMSEL+VQPDSATYSVL+RSLCQ+GD+ RAE+ DELAEKEILL+D GC+PLVAA
Sbjct: 399 FSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAA 458
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFEYLC NGKT+KAE +FRQLMKRGTQDPPS+KT+I+GHC+EGT EAG++LLVLMLR
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLR 518
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDFVPDAE Y +IDGLL+KG P+LA ++LEKMLKSSHLP T+IFHSILA
Sbjct: 519 RDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILA 568
Score = 70.1 bits (170), Expect = 4e-09
Identities = 75/312 (24%), Positives = 122/312 (39%), Gaps = 37/312 (11%)
Frame = -1
Query: 1202 NSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEM-- 1029
N+LI+ + G +E+ VF M L V P T++ L+ L +RG A +DE+
Sbjct: 383 NTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE 442
Query: 1028 ----LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLC 861
L G P +N + C N + R F+++ + + D +Y T++ G C
Sbjct: 443 KEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMK-RGTQDPPSYKTLILGHC 501
Query: 860 RAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPN 681
R G + +++ M RD P+ TY +I G K + A LE+M+ P
Sbjct: 502 REGTPEAGFDLLVLMLR--RDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPT 559
Query: 680 RITYNTLIKGL----CEAQRFDKIKEILEGTV-------TH-------GGFTPDTCTFNT 555
+++++ L C + +K +LE + TH G
Sbjct: 560 TAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIG 619
Query: 554 LMHAH-------------CNSGNLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQGDYD 414
L++ + C S L EA K+ E + D S +I LC+
Sbjct: 620 LLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVS 679
Query: 413 RAEKLSDELAEK 378
A L EL EK
Sbjct: 680 EAFALYYELVEK 691
>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1163
Score = 662 bits (1708), Expect = 0.0
Identities = 319/410 (77%), Positives = 369/410 (90%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLEDRFFNSLIR+YG+AGLFQES++VF +MKS+GVSPSV+TFNSLL ILLKRGRTNM
Sbjct: 150 GTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNM 209
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A++++DEMLSTYGVTPDTYTFNILIRGFC NSMVDEGFRFF+E+SRFKC+PD++TYNT+V
Sbjct: 210 AQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLV 269
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV+IA NVV GM KS +LNP+VVTYTTL+RG+CMK EID+AL V EEM+S+G
Sbjct: 270 DGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKG 329
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN ITYNTLIKGLCE Q+ DKIK+I EG + GGF PDTCT NTLM+AHCN+GNL++A
Sbjct: 330 LKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDA 389
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
L+VF KM L V+PDSATYSVLIR+LCQ+G+++RAE+L DEL+EKEILL D GC PLVAA
Sbjct: 390 LEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAA 449
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
Y MFE+LCRNGKT KAE +FRQLMKRGTQDP SFK +I GHC+EGTFEAGYELLVLMLR
Sbjct: 450 YKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLR 509
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDFVPD E Y+SLIDGLLQKG+PL+A QTLEKM+KSSH+P TS FHSILA
Sbjct: 510 RDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILA 559
Score = 88.6 bits (218), Expect = 1e-14
Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 39/308 (12%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEML 1026
+ +L+R Y E+L VF M S G+ P+ IT+N+L+ L + + + + +++ L
Sbjct: 302 YTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGAL 361
Query: 1025 STYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGKV 846
G PDT T N L+ C +++ F+++ PD TY+ ++ LC+ G
Sbjct: 362 GGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNF 421
Query: 845 DIARNVVKGMSNKS---RD--LNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPN 681
+ A + +S K RD P V Y ++ C + A V +++ RG + +
Sbjct: 422 ERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-D 480
Query: 680 RITYNTLIKGLCEAQRFDKIKEIL-------------------EGTVTHG---------- 588
+++ LIKG C F+ E+L +G + G
Sbjct: 481 PLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLE 540
Query: 587 -----GFTPDTCTFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQG 423
P+T TF++++ G E+ + M E +++ + + +R L G
Sbjct: 541 KMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSG 600
Query: 422 DYDRAEKL 399
D+A K+
Sbjct: 601 LRDKAFKI 608
>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508704486|gb|EOX96382.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 724
Score = 655 bits (1690), Expect = 0.0
Identities = 318/410 (77%), Positives = 366/410 (89%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLED+FFNSLIR+YG+AGLFQES+KVF TMK +GVSPSV++FN+LL ILLKRGRTNM
Sbjct: 154 GSVKLEDQFFNSLIRSYGKAGLFQESIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNM 213
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A++++DEMLSTYGV+PD YTFNILIRGFCMNSMVDEGFRFF+E+ RFKC+PDV+TYNTIV
Sbjct: 214 AKSVFDEMLSTYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIV 273
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV IARNVV+GMS KS DLNPNVVTYTTL+RG+CMKQEID+AL V +EMISR
Sbjct: 274 DGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRR 333
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
L+PNRITYNTLIKGL E ++KIKEILEG G F PDTCT NTL++AHCN+ N+DEA
Sbjct: 334 LRPNRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAENMDEA 393
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
L VF +MSEL V PDSATYSV+IRSLCQ+GD+++AE+ DELAEKEILL+D GC PLVAA
Sbjct: 394 LNVFKRMSELNVLPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEILLSDVGCTPLVAA 453
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFEYLC NGKT+KAE +FRQLMKRG QDPP++KT+I+GHC+EGTF+ GYELLVLMLR
Sbjct: 454 YNPMFEYLCGNGKTKKAEIVFRQLMKRGRQDPPAYKTLILGHCREGTFKDGYELLVLMLR 513
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDF P EIY+SLI GLLQKG+PLLA TLEKMLKSSHLP+TS HSILA
Sbjct: 514 RDFEPGFEIYDSLICGLLQKGEPLLAHLTLEKMLKSSHLPQTSSVHSILA 563
Score = 76.3 bits (186), Expect = 5e-11
Identities = 78/358 (21%), Positives = 140/358 (39%), Gaps = 39/358 (10%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLG-VSPSVITFNSLLSILLKRGRTNMARNLYDEM 1029
+N+LI+ +++ ++ M G P T N+L++ + A N++ M
Sbjct: 341 YNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRM 400
Query: 1028 LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFK-------CEPDVITYNTIVD 870
S V PD+ T++++IR C ++ FF E++ + C P V YN + +
Sbjct: 401 -SELNVLPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEILLSDVGCTPLVAAYNPMFE 459
Query: 869 GLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGL 690
LC GK A V + + + R P Y TLI G C + D +L M+ R
Sbjct: 460 YLCGNGKTKKAEIVFRQLMKRGRQDPP---AYKTLILGHCREGTFKDGYELLVLMLRRDF 516
Query: 689 KPNRITYNTLIKGLCE-----------------------AQRFDKIKEILEGTVTHGGFT 579
+P Y++LI GL + + + E+L+ + +
Sbjct: 517 EPGFEIYDSLICGLLQKGEPLLAHLTLEKMLKSSHLPQTSSVHSILAELLKKSCAQEAAS 576
Query: 578 PDTCTFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYS--------VLIRSLCQQG 423
T +T + + N L ++ + Q Y L+ LCQ G
Sbjct: 577 LVTLMLDTRIRQNVNLSTQTAKLLFARRLQDKAFQIIGLLYDNGYVVEMEELVGFLCQSG 636
Query: 422 DYDRAEKLSDELAEKEILLNDAGCRPLVAAYNPMFEYLCRNGKTRKAEGIFRQLMKRG 249
A K+ EK ++ C ++ E LC + + +A G++ +L++RG
Sbjct: 637 KLLEACKMLQFSLEKHKSVDIEMCSMVI-------EGLCNSKRLSEAFGLYYELVERG 687
>ref|XP_010052040.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Eucalyptus grandis]
gi|629110935|gb|KCW75895.1| hypothetical protein
EUGRSUZ_D00277 [Eucalyptus grandis]
Length = 761
Score = 655 bits (1689), Expect = 0.0
Identities = 315/411 (76%), Positives = 369/411 (89%), Gaps = 2/411 (0%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLEDR+FNSLIR+YG+AGLFQESLK+F MK +G+SPSVITFN+L S+LLKRGRTNM
Sbjct: 154 GAVKLEDRYFNSLIRSYGKAGLFQESLKLFEKMKEIGISPSVITFNNLFSLLLKRGRTNM 213
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
+++YDEML+TYGVTPDTYT+NILIRGFCMNSMVDEGF FF+E+S+F CEPDVITYNT+V
Sbjct: 214 VKHVYDEMLNTYGVTPDTYTYNILIRGFCMNSMVDEGFHFFKEMSQFNCEPDVITYNTLV 273
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV+IA NVVKGM KS DL PNV+TYTTLIRG+CMK EIDDAL+++EEM++ G
Sbjct: 274 DGLCRAGKVNIANNVVKGMRTKSADLKPNVITYTTLIRGYCMKGEIDDALAIIEEMVNGG 333
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGG--FTPDTCTFNTLMHAHCNSGNLD 519
LKPN+ITYNTLIKGLCEA++ DKIKEILEGTV G F PD+CT NTLMH+HCNSGNLD
Sbjct: 334 LKPNKITYNTLIKGLCEARKLDKIKEILEGTVGKGDRVFIPDSCTLNTLMHSHCNSGNLD 393
Query: 518 EALKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLV 339
EAL VF KMSELQV PDSA+YSVLIRSLCQ+G+++RAE L +EL+EK+ILL+DAGC PLV
Sbjct: 394 EALNVFEKMSELQVSPDSASYSVLIRSLCQKGEFERAEVLFNELSEKQILLSDAGCVPLV 453
Query: 338 AAYNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLM 159
AAY+PMF YLC++GKT+KAE +FRQLMKRG QDPPS+KT+I+GHC+EGTFEAGY+LLVLM
Sbjct: 454 AAYHPMFVYLCKSGKTKKAEEVFRQLMKRGMQDPPSYKTLIVGHCREGTFEAGYDLLVLM 513
Query: 158 LRRDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSIL 6
LRRDFVPD E Y SLI+GLL K PLLA + LEKML+SSH PR+S FH+IL
Sbjct: 514 LRRDFVPDYETYLSLIEGLLSKDNPLLAYKILEKMLRSSHHPRSSTFHAIL 564
Score = 125 bits (314), Expect = 7e-26
Identities = 104/443 (23%), Positives = 175/443 (39%), Gaps = 72/443 (16%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEML 1026
+N LIR + + E F M P VIT+N+L+ L + G+ N+A N+ M
Sbjct: 234 YNILIRGFCMNSMVDEGFHFFKEMSQFNCEPDVITYNTLVDGLCRAGKVNIANNVVKGMR 293
Query: 1025 S-TYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGK 849
+ + + P+ T+ LIRG+CM +D+ +E+ +P+ ITYNT++ GLC A K
Sbjct: 294 TKSADLKPNVITYTTLIRGYCMKGEIDDALAIIEEMVNGGLKPNKITYNTLIKGLCEARK 353
Query: 848 VDIARNVVKGMSNKS-RDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPNRIT 672
+D + +++G K R P+ T TL+ C +D+AL+V E+M + P+ +
Sbjct: 354 LDKIKEILEGTVGKGDRVFIPDSCTLNTLMHSHCNSGNLDEALNVFEKMSELQVSPDSAS 413
Query: 671 YNTLIKGL------------------------------------------CEAQRFDKIK 618
Y+ LI+ L C++ + K +
Sbjct: 414 YSVLIRSLCQKGEFERAEVLFNELSEKQILLSDAGCVPLVAAYHPMFVYLCKSGKTKKAE 473
Query: 617 EILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVLIRS 438
E+ + G D ++ TL+ HC G + + M PD TY LI
Sbjct: 474 EVFRQLMKRG--MQDPPSYKTLIVGHCREGTFEAGYDLLVLMLRRDFVPDYETYLSLIEG 531
Query: 437 LCQQGDYDRAEKLSDELAEKE-------------ILLNDAGCRPLVAAYNPMFE------ 315
L + + A K+ +++ +LL + M E
Sbjct: 532 LLSKDNPLLAYKILEKMLRSSHHPRSSTFHAILTVLLKKERAHESASLVKVMLEKHIRQN 591
Query: 314 ---------YLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVL 162
L G RKA + L + G T + C++G ELL+
Sbjct: 592 INLSTQTVRLLFSRGLGRKAFELVNLLYQNGYVIAIEELTSFL--CQKGKVLEAGELLLY 649
Query: 161 MLRRDFVPDAEIYESLIDGLLQK 93
LR+D D +Y ++ GL ++
Sbjct: 650 GLRKDSRIDINMYSIVMKGLCER 672
Score = 75.9 bits (185), Expect = 7e-11
Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Frame = -1
Query: 1232 GVVKLEDRFF-------NSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILL 1074
G V DR F N+L+ ++ +G E+L VF M L VSP +++ L+ L
Sbjct: 363 GTVGKGDRVFIPDSCTLNTLMHSHCNSGNLDEALNVFEKMSELQVSPDSASYSVLIRSLC 422
Query: 1073 KRGRTNMARNLYDEM------LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRF 912
++G A L++E+ LS G P ++ + C + + F+++ +
Sbjct: 423 QKGEFERAEVLFNELSEKQILLSDAGCVPLVAAYHPMFVYLCKSGKTKKAEEVFRQLMKR 482
Query: 911 KCEPDVITYNTIVDGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEID 732
+ D +Y T++ G CR G + +++ M RD P+ TY +LI G K
Sbjct: 483 GMQ-DPPSYKTLIVGHCREGTFEAGYDLLVLMLR--RDFVPDYETYLSLIEGLLSKDNPL 539
Query: 731 DALSVLEEMISRGLKPNRITYNTLIKGLCEAQRFDK----IKEILEGTVTHG-------- 588
A +LE+M+ P T++ ++ L + +R + +K +LE +
Sbjct: 540 LAYKILEKMLRSSHHPRSSTFHAILTVLLKKERAHESASLVKVMLEKHIRQNINLSTQTV 599
Query: 587 ------GFTPDTCTFNTLMHAH-------------CNSGNLDEALKVFAKMSELQVQPDS 465
G L++ + C G + EA ++ + D
Sbjct: 600 RLLFSRGLGRKAFELVNLLYQNGYVIAIEELTSFLCQKGKVLEAGELLLYGLRKDSRIDI 659
Query: 464 ATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
YS++++ LC++ +A L EL E+E N C L A
Sbjct: 660 NMYSIVMKGLCERRQLSQAFALFYELVERESFQNLDCCEELRTA 703
>gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum]
Length = 741
Score = 652 bits (1682), Expect = 0.0
Identities = 317/410 (77%), Positives = 366/410 (89%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLED+FFNSLIR+YG+AGLFQES+KVF TMKS+GVSPSVI+FN+LLSILLKRGRTNM
Sbjct: 154 GSVKLEDKFFNSLIRSYGKAGLFQESIKVFETMKSIGVSPSVISFNNLLSILLKRGRTNM 213
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A++++DEMLSTYGVTPD YTFNILI+GF MNSMVDEGFRFF+E+ RFKC+PDV+TYNTIV
Sbjct: 214 AKSVFDEMLSTYGVTPDVYTFNILIKGFGMNSMVDEGFRFFKEMERFKCDPDVVTYNTIV 273
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCR GKV IA NVVKGMS KS DLNPNVVTYTTL+RG+CMKQ+ID+AL+V +EMI RG
Sbjct: 274 DGLCRVGKVRIAHNVVKGMSKKSLDLNPNVVTYTTLVRGYCMKQDIDEALAVFQEMICRG 333
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN+ITYNTLIKGL E ++DKIKEILEG G FTPDTCTFNTL++AHCN+GN+DEA
Sbjct: 334 LKPNKITYNTLIKGLSEVHKYDKIKEILEGMRKDGRFTPDTCTFNTLINAHCNAGNMDEA 393
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
L VF +MSE++VQ DSATYSV+IRSLCQ D+++AE+ DELA+KEILL GC P+VAA
Sbjct: 394 LNVFKRMSEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLGHVGCTPVVAA 453
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFEYLC NGKT+KAE +FRQL+KRG QDPP++KT+I+GHCKEGTFEAGYELLVLMLR
Sbjct: 454 YNPMFEYLCANGKTKKAERVFRQLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLR 513
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDF P EIY+SLI GLL KG+ LLA TLEKMLKSSHLP+TS HSILA
Sbjct: 514 RDFEPGFEIYDSLITGLLLKGESLLACLTLEKMLKSSHLPQTSSVHSILA 563
Score = 80.1 bits (196), Expect = 4e-12
Identities = 80/358 (22%), Positives = 146/358 (40%), Gaps = 39/358 (10%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLG-VSPSVITFNSLLSILLKRGRTNMARNLYDEM 1029
+N+LI+ + + ++ M+ G +P TFN+L++ G + A N++ M
Sbjct: 341 YNTLIKGLSEVHKYDKIKEILEGMRKDGRFTPDTCTFNTLINAHCNAGNMDEALNVFKRM 400
Query: 1028 LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFK-------CEPDVITYNTIVD 870
S V D+ T++++IR C + ++ FF E+++ + C P V YN + +
Sbjct: 401 -SEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLGHVGCTPVVAAYNPMFE 459
Query: 869 GLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGL 690
LC GK A V + + + R P Y TLI G C + + +L M+ R
Sbjct: 460 YLCANGKTKKAERVFRQLLKRGRQDPP---AYKTLILGHCKEGTFEAGYELLVLMLRRDF 516
Query: 689 KPNRITYNTLIKGLC----------EAQRFDKIKEILEGTVTHG--------GFTPDTCT 564
+P Y++LI GL ++ K + + + H + +
Sbjct: 517 EPGFEIYDSLITGLLLKGESLLACLTLEKMLKSSHLPQTSSVHSILAELLKKSCAQEAAS 576
Query: 563 FNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVL-------------IRSLCQQG 423
TLM H N++ + + + ++Q + VL + LCQ G
Sbjct: 577 LVTLMLDHRIRLNINLSTQTVKLLLARRMQDKAFQVLVLLYDDGYMVKMEDLVHFLCQSG 636
Query: 422 DYDRAEKLSDELAEKEILLNDAGCRPLVAAYNPMFEYLCRNGKTRKAEGIFRQLMKRG 249
A K+ EK + C ++ E LC N + +A G++ +L++RG
Sbjct: 637 MLLEACKMIQFSLEKHQTADIEICCTVI-------EGLCNNRRLSEAFGLYYELVERG 687
>ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Gossypium raimondii]
Length = 678
Score = 651 bits (1680), Expect = 0.0
Identities = 315/410 (76%), Positives = 367/410 (89%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLED+FFNSLIR+YG+AGLFQES+KVF TMKS+GVSPSV++FN+LLSILLKRGRTNM
Sbjct: 91 GSVKLEDKFFNSLIRSYGKAGLFQESIKVFETMKSIGVSPSVVSFNNLLSILLKRGRTNM 150
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+++++EMLSTYGVTPD YTFNILI+GFCMNSMVDEGFRFF+E+ RFKC+PDV+TYNTIV
Sbjct: 151 AKSVFNEMLSTYGVTPDVYTFNILIKGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIV 210
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCR GKV IA NVVKGMS KS DLNPNVVTYTTL+RG+CMKQ+ID+AL+V +EMI RG
Sbjct: 211 DGLCRVGKVGIAHNVVKGMSKKSLDLNPNVVTYTTLLRGYCMKQDIDEALAVFQEMICRG 270
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN+ITYNTLIKGL E ++DKIKEILE G FT DTCTFNTL++AHCN+GN+DEA
Sbjct: 271 LKPNKITYNTLIKGLSEVHKYDKIKEILERMGEDGRFTLDTCTFNTLINAHCNAGNMDEA 330
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
L V +MSE++VQ DSATYSV+IRSLCQ D+++AE+ DELA+KEILL+ GC PLVAA
Sbjct: 331 LNVLKRMSEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLSHVGCTPLVAA 390
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFEYLC NGKT+KAE +FRQL+KRG QDPP++KT+I+GHCKEGTFEAGYELLVLMLR
Sbjct: 391 YNPMFEYLCANGKTKKAERVFRQLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLR 450
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDF P EIY+SLI GLL KG+PLLA+ TLEKMLKSSHLP+TS HSILA
Sbjct: 451 RDFEPGFEIYDSLITGLLLKGEPLLARLTLEKMLKSSHLPQTSSVHSILA 500
Score = 72.0 bits (175), Expect = 1e-09
Identities = 78/358 (21%), Positives = 143/358 (39%), Gaps = 39/358 (10%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLG-VSPSVITFNSLLSILLKRGRTNMARNLYDEM 1029
+N+LI+ + + ++ M G + TFN+L++ G + A N+ M
Sbjct: 278 YNTLIKGLSEVHKYDKIKEILERMGEDGRFTLDTCTFNTLINAHCNAGNMDEALNVLKRM 337
Query: 1028 LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFK-------CEPDVITYNTIVD 870
S V D+ T++++IR C + ++ FF E+++ + C P V YN + +
Sbjct: 338 -SEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLSHVGCTPLVAAYNPMFE 396
Query: 869 GLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGL 690
LC GK A V + + + R P Y TLI G C + + +L M+ R
Sbjct: 397 YLCANGKTKKAERVFRQLLKRGRQDPP---AYKTLILGHCKEGTFEAGYELLVLMLRRDF 453
Query: 689 KPNRITYNTLIKGLC----------EAQRFDKIKEILEGTVTHG--------GFTPDTCT 564
+P Y++LI GL ++ K + + + H + +
Sbjct: 454 EPGFEIYDSLITGLLLKGEPLLARLTLEKMLKSSHLPQTSSVHSILAELLKKSCAQEAAS 513
Query: 563 FNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVL-------------IRSLCQQG 423
TLM H N++ + + + ++Q + VL +R LCQ G
Sbjct: 514 LVTLMLDHRIRLNINLSTQTVKLLLARRMQDKAFQVLVLLYDDGYMVEMEDLVRFLCQSG 573
Query: 422 DYDRAEKLSDELAEKEILLNDAGCRPLVAAYNPMFEYLCRNGKTRKAEGIFRQLMKRG 249
K+ EK ++ C ++ E LC N + +A ++ +L++RG
Sbjct: 574 MLLEVCKMIQFSLEKHQTVDIEICCTVI-------EGLCNNRRLSEAFSLYYELVERG 624
>gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium raimondii]
Length = 1615
Score = 651 bits (1680), Expect = 0.0
Identities = 315/410 (76%), Positives = 367/410 (89%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLED+FFNSLIR+YG+AGLFQES+KVF TMKS+GVSPSV++FN+LLSILLKRGRTNM
Sbjct: 1028 GSVKLEDKFFNSLIRSYGKAGLFQESIKVFETMKSIGVSPSVVSFNNLLSILLKRGRTNM 1087
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+++++EMLSTYGVTPD YTFNILI+GFCMNSMVDEGFRFF+E+ RFKC+PDV+TYNTIV
Sbjct: 1088 AKSVFNEMLSTYGVTPDVYTFNILIKGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIV 1147
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCR GKV IA NVVKGMS KS DLNPNVVTYTTL+RG+CMKQ+ID+AL+V +EMI RG
Sbjct: 1148 DGLCRVGKVGIAHNVVKGMSKKSLDLNPNVVTYTTLLRGYCMKQDIDEALAVFQEMICRG 1207
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN+ITYNTLIKGL E ++DKIKEILE G FT DTCTFNTL++AHCN+GN+DEA
Sbjct: 1208 LKPNKITYNTLIKGLSEVHKYDKIKEILERMGEDGRFTLDTCTFNTLINAHCNAGNMDEA 1267
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
L V +MSE++VQ DSATYSV+IRSLCQ D+++AE+ DELA+KEILL+ GC PLVAA
Sbjct: 1268 LNVLKRMSEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLSHVGCTPLVAA 1327
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFEYLC NGKT+KAE +FRQL+KRG QDPP++KT+I+GHCKEGTFEAGYELLVLMLR
Sbjct: 1328 YNPMFEYLCANGKTKKAERVFRQLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLR 1387
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDF P EIY+SLI GLL KG+PLLA+ TLEKMLKSSHLP+TS HSILA
Sbjct: 1388 RDFEPGFEIYDSLITGLLLKGEPLLARLTLEKMLKSSHLPQTSSVHSILA 1437
Score = 72.0 bits (175), Expect = 1e-09
Identities = 78/358 (21%), Positives = 143/358 (39%), Gaps = 39/358 (10%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLG-VSPSVITFNSLLSILLKRGRTNMARNLYDEM 1029
+N+LI+ + + ++ M G + TFN+L++ G + A N+ M
Sbjct: 1215 YNTLIKGLSEVHKYDKIKEILERMGEDGRFTLDTCTFNTLINAHCNAGNMDEALNVLKRM 1274
Query: 1028 LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFK-------CEPDVITYNTIVD 870
S V D+ T++++IR C + ++ FF E+++ + C P V YN + +
Sbjct: 1275 -SEMKVQSDSATYSVIIRSLCQIADFEKAEEFFDELAKKEILLSHVGCTPLVAAYNPMFE 1333
Query: 869 GLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGL 690
LC GK A V + + + R P Y TLI G C + + +L M+ R
Sbjct: 1334 YLCANGKTKKAERVFRQLLKRGRQDPP---AYKTLILGHCKEGTFEAGYELLVLMLRRDF 1390
Query: 689 KPNRITYNTLIKGLC----------EAQRFDKIKEILEGTVTHG--------GFTPDTCT 564
+P Y++LI GL ++ K + + + H + +
Sbjct: 1391 EPGFEIYDSLITGLLLKGEPLLARLTLEKMLKSSHLPQTSSVHSILAELLKKSCAQEAAS 1450
Query: 563 FNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVL-------------IRSLCQQG 423
TLM H N++ + + + ++Q + VL +R LCQ G
Sbjct: 1451 LVTLMLDHRIRLNINLSTQTVKLLLARRMQDKAFQVLVLLYDDGYMVEMEDLVRFLCQSG 1510
Query: 422 DYDRAEKLSDELAEKEILLNDAGCRPLVAAYNPMFEYLCRNGKTRKAEGIFRQLMKRG 249
K+ EK ++ C ++ E LC N + +A ++ +L++RG
Sbjct: 1511 MLLEVCKMIQFSLEKHQTVDIEICCTVI-------EGLCNNRRLSEAFSLYYELVERG 1561
>ref|XP_008444214.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Cucumis melo]
gi|659086988|ref|XP_008444216.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Cucumis melo]
Length = 757
Score = 651 bits (1679), Expect = 0.0
Identities = 312/410 (76%), Positives = 364/410 (88%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G+VKLE RFFNSL+RN+ RAGLFQES+KVF MKS GVSPSV+TFNSLL+ILLKRGRTNM
Sbjct: 143 GIVKLEARFFNSLMRNFSRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNM 202
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+N+Y EMLSTYGVTPDTYTFNILIRGFCMN MVD+GFR F ++ RF CEPDV+TYNT+V
Sbjct: 203 AKNVYYEMLSTYGVTPDTYTFNILIRGFCMNGMVDDGFRIFNDLPRFGCEPDVVTYNTLV 262
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV +A N+ KGM KS DLNPNVVTYTTLIRG+C K+EID AL+V EEM+++G
Sbjct: 263 DGLCRAGKVTVAYNLAKGMGKKSVDLNPNVVTYTTLIRGYCAKREIDKALAVFEEMVNQG 322
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LK N ITYNTLIKGLCEAQ+F+KIKEILE T G F+PDTCTFNTLMH HC++GNLD+A
Sbjct: 323 LKANNITYNTLIKGLCEAQKFEKIKEILEATAGDGTFSPDTCTFNTLMHCHCHAGNLDDA 382
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LKVF +MSEL++QPDSATYSVL RSLCQ G Y++AE L D+L E++ILL+D C+PLVA+
Sbjct: 383 LKVFERMSELKIQPDSATYSVLARSLCQGGHYEKAEDLLDKLLERKILLSDDSCKPLVAS 442
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNP+F+YLC NGKT+KAE +FRQLM+RGTQDPPS+KT+IMGHCKEGTFE+GYELLVLMLR
Sbjct: 443 YNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLR 502
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
+DF+PD EIYESLI+GLL KPLLA Q+LEKMLKSSH P++S FHSILA
Sbjct: 503 KDFLPDFEIYESLINGLLHIDKPLLALQSLEKMLKSSHRPKSSTFHSILA 552
>ref|XP_011470532.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 1141
Score = 650 bits (1677), Expect = 0.0
Identities = 311/415 (74%), Positives = 368/415 (88%), Gaps = 5/415 (1%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLED+FFNSLIR+YG AGLFQE++ VF TMKS+G+S SV +FNSL S+LLKRGRT+M
Sbjct: 144 GKVKLEDKFFNSLIRSYGAAGLFQEAVNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSM 203
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
RN+YDEML YGV PDT+TFNILIRGFCM+SMVDEGF FF+E+ RFKCEPDV+TYNT+V
Sbjct: 204 VRNVYDEMLGMYGVEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLV 263
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRD-----LNPNVVTYTTLIRGFCMKQEIDDALSVLEE 708
DGLCR GKV+IARNVVKGM +KS + LNPNVVTYTTLIRG+C++QE+D+AL VLEE
Sbjct: 264 DGLCRDGKVEIARNVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEE 323
Query: 707 MISRGLKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSG 528
M S+G+KPN ITYNTL KGLCEA+R DKIKEILEG + GFTPDTCTFNTLMH+HC +G
Sbjct: 324 MTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAG 383
Query: 527 NLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCR 348
NL+EALKVF MSEL+V PDSATYSVLIRS C++ DY +AE+L DEL++K+ILL+D GC
Sbjct: 384 NLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCT 443
Query: 347 PLVAAYNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELL 168
P+VA+Y P+FEYLC NG+T+KA+ +FRQL+KRGTQDPPSFKT+IMGHC+EGT+EAGY+L+
Sbjct: 444 PIVASYKPIFEYLCSNGRTKKADEVFRQLLKRGTQDPPSFKTLIMGHCREGTYEAGYKLV 503
Query: 167 VLMLRRDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
VLMLRRD+VPD +IY+SLIDG L+KG PLLAQQTLEKMLKSSHLPRTS FHSILA
Sbjct: 504 VLMLRRDYVPDVKIYDSLIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILA 558
Score = 102 bits (253), Expect = 9e-19
Identities = 99/460 (21%), Positives = 175/460 (38%), Gaps = 80/460 (17%)
Frame = -1
Query: 1226 VKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMAR 1047
V+ + FN LIR + + + E F M+ P V+T+N+L+ L + G+ +AR
Sbjct: 217 VEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIAR 276
Query: 1046 NLYDEMLSTYG------VTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITY 885
N+ M+S + P+ T+ LIRG+C+ VDE +E++ +P+ ITY
Sbjct: 277 NVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITY 336
Query: 884 NTIVDGLCRAGKVDIARNVVKGMSN----------------------------------K 807
NT+ GLC A ++D + +++G
Sbjct: 337 NTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAGNLEEALKVFRMMS 396
Query: 806 SRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISR-------GLKPNRITYNTLIKGL 648
+ P+ TY+ LIR +C +++ A + +E+ + G P +Y + + L
Sbjct: 397 ELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASYKPIFEYL 456
Query: 647 CEAQRFDKIKEIL-----------------------EGTVTHG----------GFTPDTC 567
C R K E+ EGT G + PD
Sbjct: 457 CSNGRTKKADEVFRQLLKRGTQDPPSFKTLIMGHCREGTYEAGYKLVVLMLRRDYVPDVK 516
Query: 566 TFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDEL 387
+++L+ GN A + KM + P ++T+ ++ +L ++ + L +
Sbjct: 517 IYDSLIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILAALLEKHCARESASLFSLM 576
Query: 386 AEKEILLNDAGCRPLVAAYNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGH 207
EK RP + + + L G KA I L G + ++
Sbjct: 577 LEKNF-------RPNIDLSTDLLKLLFSEGLQEKAFKIVGLLHDGGYS--IKLEELVKFL 627
Query: 206 CKEGTFEAGYELLVLMLRRDFVPDAEIYESLIDGLLQKGK 87
C+ ELL LR+ +I + +I GL + K
Sbjct: 628 CQSRKLLEACELLQFSLRKQENVSIDILDQVILGLCEINK 667
>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Cucumis sativus]
gi|778694261|ref|XP_011653773.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Cucumis sativus]
gi|700199375|gb|KGN54533.1| hypothetical protein
Csa_4G358710 [Cucumis sativus]
Length = 757
Score = 647 bits (1669), Expect = 0.0
Identities = 309/410 (75%), Positives = 363/410 (88%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G+VKLE RFFNSL+RN+ RAGLFQES+KVF MKS GVSPSV+TFNSLL+ILLKRGRTNM
Sbjct: 143 GIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNM 202
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+ +YDEMLSTYGVTPDT+TFNILIRGFCMN MVD+GFR F ++SRF CEPDV+TYNT+V
Sbjct: 203 AKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLV 262
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV +A NVVKGM KS DLNPNVVTYTTLIRG+C K+EI+ AL+V EEM+++G
Sbjct: 263 DGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQG 322
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LK N ITYNTLIKGLCEA++F+KIK+ILEGT G F+PDTCTFNTLMH HC++GNLD+A
Sbjct: 323 LKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDA 382
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LKVF +MSEL++QPDSATYS L+RSLCQ G Y++AE L D+L E++ILL+ GC+PLVAA
Sbjct: 383 LKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAA 442
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNP+F+YLC GKT+KAE FRQLM+RGTQDPPS+KT+IMGHCKEGTFE+GYELLVLMLR
Sbjct: 443 YNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLR 502
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
+DF+PD E YESLI+GLL KPLLA Q+LEKML+SSH P +S FHSILA
Sbjct: 503 KDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILA 552
Score = 107 bits (267), Expect = 2e-20
Identities = 85/364 (23%), Positives = 149/364 (40%), Gaps = 79/364 (21%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEM- 1029
FN LIR + G+ + ++F + G P V+T+N+L+ L + G+ +A N+ M
Sbjct: 223 FNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMG 282
Query: 1028 LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGK 849
+ + P+ T+ LIRG+C +++ F+E+ + + ITYNT++ GLC A K
Sbjct: 283 KKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARK 342
Query: 848 VDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSV---------------- 717
+ +++++G + +P+ T+ TL+ C +DDAL V
Sbjct: 343 FEKIKDILEGTAGDGT-FSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATY 401
Query: 716 -------------------LEEMISR-------GLKPNRITYNTLIKGLCEAQRFDKIKE 615
L++++ R G KP YN + K LCE + K ++
Sbjct: 402 SALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEK 461
Query: 614 IL-----------------------EGTVTHG----------GFTPDTCTFNTLMHAHCN 534
EGT G F PD T+ +L++ +
Sbjct: 462 AFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLH 521
Query: 533 SGNLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLN--- 363
AL+ KM +P+S+T+ ++ L +QG + L + +K I N
Sbjct: 522 MDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSF 581
Query: 362 DAGC 351
GC
Sbjct: 582 STGC 585
>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
gi|550323558|gb|ERP53036.1| hypothetical protein
POPTR_0014s05550g [Populus trichocarpa]
Length = 728
Score = 644 bits (1662), Expect = 0.0
Identities = 306/410 (74%), Positives = 366/410 (89%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VK+EDRF N+L+R+YG AGLF E++K+F+ MKS GVSPSVITFNSLL ILLKRGRTNM
Sbjct: 155 GSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNM 214
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A +++DEM TYGVTPDTYTFNILIRGFC NSMVDEGFRFF+E+SRF CEPDV+TYNT+V
Sbjct: 215 AHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLV 274
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV IA NVVKGM K +DL+P+VVTYTTL+RG+CMKQEID+AL V EEM+SRG
Sbjct: 275 DGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRG 334
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN ITYNTLIKGLCE Q+FDKIKEIL G V GF PDTCT+NTLM+A C++GN DEA
Sbjct: 335 LKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEA 394
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LK+F KM EL+VQPDSATYSVLIR+LCQ+GD++RAE+L D+L++++ILL D GC PLVAA
Sbjct: 395 LKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAA 454
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNP+F++LC+NGKT KAE +FRQLMK+GTQDPPS+KT+I+GHCKEGTFEAGY+LL+ MLR
Sbjct: 455 YNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLR 514
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RD+VPD E Y LI+G LQKG+P+LA +TLE+MLKSS+LP+TS+FHSIL+
Sbjct: 515 RDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILS 564
Score = 83.6 bits (205), Expect = 3e-13
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 9/327 (2%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEM- 1029
+N+L+ AG F E+LK+F MK L V P T++ L+ L +RG A L+D++
Sbjct: 378 YNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLS 437
Query: 1028 -----LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGL 864
L G TP +N + C N + R F+++ + K D +Y T++ G
Sbjct: 438 DEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMK-KGTQDPPSYKTLIIGH 496
Query: 863 CRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKP 684
C+ G + ++ M RD P+ TY LI GF K E A LE M+ P
Sbjct: 497 CKEGTFEAGYKLLLFMLR--RDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLP 554
Query: 683 NRITYNTLIKGLCE---AQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
+++++ L + A+ ++ T T L +
Sbjct: 555 KTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLR------- 607
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
+K F + L LI +CQ G A+K+ EK G +
Sbjct: 608 IKAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEK-------GHNVDINV 660
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKR 252
N + E LC+ + +A G++ L+++
Sbjct: 661 CNVVIEGLCKMKRPLEAFGLYYMLVEK 687
>ref|XP_012083857.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Jatropha curcas]
Length = 1162
Score = 644 bits (1660), Expect = 0.0
Identities = 311/410 (75%), Positives = 361/410 (88%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKLEDRFFNSLIR+YGRAGLFQES+K+F +MKS+GVSPSV+TFNSLL ILLKRGRTNM
Sbjct: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A++++DEMLSTYGV PDTYTFNILIRGFC NSMVD+GFRFFQ++S F C+PD++TYNT+V
Sbjct: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV A NVVKGM KS DLNP+VV+YTTL+RG+CMKQ ID+AL V EEM+ +G
Sbjct: 274 DGLCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN +TYNTLIKGLCE Q+ DKIKE+LEG + GGF+PDTCT NTLM+ HCN+GNL+EA
Sbjct: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LKVF KM E +VQPDSATYSVL+R+LC GD++RAEKL DEL +K ILL D G PLVAA
Sbjct: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
Y MF++LC+NGKT KAE FRQLMKRGTQDP S+K +I+GHCKEGTFEAGYELLVLMLR
Sbjct: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLR 513
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
R+F PD+EIY+SLIDGLLQKG+PLLA QTL+KMLKSS +P TS FHSILA
Sbjct: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
>ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Populus euphratica]
Length = 1216
Score = 644 bits (1660), Expect = 0.0
Identities = 306/410 (74%), Positives = 365/410 (89%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VK+EDRF N+L+R+YG AGLF E++K+F+ MKS GVSPSVITFNSLL ILLKRGRTNM
Sbjct: 155 GSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNM 214
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A +++DEM TYGVTPDTYTFNILIRGFC NSMVDEGFRFF+E+SRF CEPDV+TYNT+V
Sbjct: 215 AHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLV 274
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCRAGKV IA NVVKGM K +DL+P+VVTYTTL+RG+CMKQEID+AL V EEM+SRG
Sbjct: 275 DGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRG 334
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
LKPN ITYNTLIKGLCE Q+FDKIKEIL G V GF PDTCT+NTLM++ C++GN DEA
Sbjct: 335 LKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNSQCDAGNFDEA 394
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
LK+F KM EL+VQPDSATYSVLIR+LCQ+GD++RAE+L DEL++ +ILL D GC PLVAA
Sbjct: 395 LKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDELSDDDILLRDDGCTPLVAA 454
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNP+F++LC+NGKT KAE +FRQLMK+GTQDPPS+KT+I+GHCKEGTFEAGY+LL+ MLR
Sbjct: 455 YNPIFDFLCKNGKTSKAERVFRQLMKKGTQDPPSYKTLILGHCKEGTFEAGYKLLLYMLR 514
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RD+VPD E Y LI+G LQKG+P+LA +TLE+MLKSS+LP+TS+FHSIL+
Sbjct: 515 RDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILS 564
Score = 87.8 bits (216), Expect = 2e-14
Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 9/327 (2%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEM- 1029
+N+L+ + AG F E+LK+F MK L V P T++ L+ L +RG A L+DE+
Sbjct: 378 YNTLMNSQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDELS 437
Query: 1028 -----LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGL 864
L G TP +N + C N + R F+++ + K D +Y T++ G
Sbjct: 438 DDDILLRDDGCTPLVAAYNPIFDFLCKNGKTSKAERVFRQLMK-KGTQDPPSYKTLILGH 496
Query: 863 CRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKP 684
C+ G + ++ M RD P+ TY LI GF K E A LE M+ P
Sbjct: 497 CKEGTFEAGYKLLLYMLR--RDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLP 554
Query: 683 NRITYNTLIKGLCE---AQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
+++++ L + A+ ++ T T L SG ++A
Sbjct: 555 KTSVFHSILSELLKHDFARESASFVVLMIDRKIRQNINLSTHTMRLLF----GSGLRNKA 610
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
++ + + D LI +CQ G A+K+ EK ++ C
Sbjct: 611 FQIVELLYDNGYVVD---MEELIGFICQNGKLLDAQKMLSFCLEKGHTVDINVC------ 661
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKR 252
N + E LC+ + +A G++ +L+++
Sbjct: 662 -NVVIEGLCKMKRPLEAFGLYYKLVEK 687
>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 627 bits (1616), Expect = e-177
Identities = 302/386 (78%), Positives = 348/386 (90%)
Frame = -1
Query: 1160 ESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEMLSTYGVTPDTYTFNIL 981
ES+KVF TMK +GVSPSV+TFNSLLSI+LKRGRT+MA+ L+DEML TYGVTPDTYTFNIL
Sbjct: 254 ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNIL 313
Query: 980 IRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGKVDIARNVVKGMSNKSR 801
IRGFCMNSMVDEGF FF+E+SRFKC+PDV+TYNT+VDGLCRAGKV IA NVVKGM KS
Sbjct: 314 IRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP 373
Query: 800 DLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPNRITYNTLIKGLCEAQRFDKI 621
+L+PNVVTYTTLIRG+CMKQ++ +ALS+L EM+SRGLKPN+ITYNTLI+GLCEAQ+ DKI
Sbjct: 374 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 433
Query: 620 KEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEALKVFAKMSELQVQPDSATYSVLIR 441
KEILEG V GGF PDTCT NTL+ AHC G L+EA VF KMSEL+VQPDSATYSVL+R
Sbjct: 434 KEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVR 493
Query: 440 SLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAAYNPMFEYLCRNGKTRKAEGIFRQL 261
SLCQ+GD+ RAE+ DELAEKEILL+D GC+PLVAAYNPMFEYLC NGKT+KAE +FRQL
Sbjct: 494 SLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 553
Query: 260 MKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLRRDFVPDAEIYESLIDGLLQKGKPL 81
MKRGTQDPPS+KT+I+GHC+EGT EAG++LLVLMLRRDFVPDAE Y +IDGLL+KG P+
Sbjct: 554 MKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPV 613
Query: 80 LAQQTLEKMLKSSHLPRTSIFHSILA 3
LA ++LEKMLKSSHLP T+IFHSILA
Sbjct: 614 LAHKSLEKMLKSSHLPTTAIFHSILA 639
Score = 134 bits (337), Expect = 2e-28
Identities = 100/399 (25%), Positives = 177/399 (44%), Gaps = 12/399 (3%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEML 1026
FN LIR + + E F M P V+T+N+L+ L + G+ +A N+ M+
Sbjct: 310 FNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMV 369
Query: 1025 -STYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGK 849
+ ++P+ T+ LIRG+CM + E E+ +P+ ITYNT++ GLC A K
Sbjct: 370 KKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQK 429
Query: 848 VDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKPNRITY 669
+D + +++GM + P+ T TLI+ C ++++A SV E+M ++P+ TY
Sbjct: 430 LDKIKEILEGMVGDGGFI-PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 488
Query: 668 NTLIKGLCEAQRFDKIKEIL------EGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEALK 507
+ L++ LC+ F + +E E + G P +N + C++G +A +
Sbjct: 489 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 548
Query: 506 VFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAAYN 327
VF ++ + Q D +Y LI C++G +AG LV
Sbjct: 549 VFRQLMKRGTQ-DPPSYKTLILGHCREG------------------TPEAGFDLLVL--- 586
Query: 326 PMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLRRD 147
L + D ++ MI G K+G ++ L ML+
Sbjct: 587 --------------------MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSS 626
Query: 146 FVPDAEIYESLIDGLLQKGKPL-----LAQQTLEKMLKS 45
+P I+ S++ L++K + + L+ T+ + KS
Sbjct: 627 HLPTTAIFHSILAALVEKERRIRQNIDLSTHTVRLLYKS 665
Score = 107 bits (268), Expect = 2e-20
Identities = 98/382 (25%), Positives = 160/382 (41%), Gaps = 1/382 (0%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEML 1026
+ +LIR Y E+L + A M S G+ P+ IT+N+L+ L + + + + + + M+
Sbjct: 382 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 441
Query: 1025 STYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGLCRAGKV 846
G PDT T N LI+ C ++E F F+++S + +PD TY+ +V LC+ G
Sbjct: 442 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG-- 499
Query: 845 DIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMI-SRGLKPNRITY 669
F +E D L+ E ++ G KP Y
Sbjct: 500 -----------------------------DFRRAEEFFDELAEKEILLHDVGCKPLVAAY 530
Query: 668 NTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEALKVFAKMS 489
N + + LC + K + + + G T D ++ TL+ HC G + + M
Sbjct: 531 NPMFEYLCSNGKTKKAERVFRQLMKRG--TQDPPSYKTLILGHCREGTPEAGFDLLVLML 588
Query: 488 ELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAAYNPMFEYL 309
PD+ TY ++I L ++GD A K +++ + L A ++AA +
Sbjct: 589 RRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKERRI 648
Query: 308 CRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLRRDFVPDAE 129
+N + R L K G QD +F T+ + +E GY LV M
Sbjct: 649 RQN--IDLSTHTVRLLYKSGLQD-KAFMTIGL------LYENGY--LVKM---------- 687
Query: 128 IYESLIDGLLQKGKPLLAQQTL 63
E L+ L Q K L AQ+ L
Sbjct: 688 --EELVSFLCQSRKLLEAQKML 707
>ref|XP_010252151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Nelumbo nucifera]
Length = 680
Score = 620 bits (1600), Expect = e-175
Identities = 299/410 (72%), Positives = 349/410 (85%)
Frame = -1
Query: 1232 GVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNM 1053
G VKL DRFFNSLIR+YG+AGL QESLKV+ TMKSLGVSPSV+TFNSL SILL+RGR M
Sbjct: 104 GTVKLHDRFFNSLIRSYGQAGLIQESLKVYMTMKSLGVSPSVVTFNSLFSILLRRGRKTM 163
Query: 1052 ARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIV 873
A+ LYDEM++T GV PD YTFNILIRGFC+NSMVD+GFRFF+E+SRF C PDV+TYNT+V
Sbjct: 164 AKKLYDEMITTVGVCPDVYTFNILIRGFCLNSMVDDGFRFFKEMSRFGCNPDVVTYNTLV 223
Query: 872 DGLCRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRG 693
DGLCR GKV IA N++ GM KS DLNPNVVTYTTLIRG+C KQ+I AL V +EM+ RG
Sbjct: 224 DGLCRTGKVRIAHNLLNGMCTKSSDLNPNVVTYTTLIRGYCEKQDIAQALDVFKEMLGRG 283
Query: 692 LKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSGNLDEA 513
+KPN ITYNTLI+GLCEA + DKI+EILEG G F PDTCTFNTLM AHCN+G L+EA
Sbjct: 284 MKPNGITYNTLIQGLCEAGKLDKIREILEGVTEGGEFVPDTCTFNTLMSAHCNAGKLEEA 343
Query: 512 LKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCRPLVAA 333
L VF KMS L+VQPDSATYSVLIRSLCQ+GD+ +AE+L D+L + EIL+ + GC PLVAA
Sbjct: 344 LHVFEKMSNLRVQPDSATYSVLIRSLCQRGDFMKAEELFDDLWKNEILVKEVGCVPLVAA 403
Query: 332 YNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELLVLMLR 153
YNPMFE+LC NG+T KA+ +FRQ++KRGTQDPP+FK +I+GHCKEGT +AGY+LLVLMLR
Sbjct: 404 YNPMFEFLCGNGRTEKADKVFRQMLKRGTQDPPAFKILILGHCKEGTVQAGYDLLVLMLR 463
Query: 152 RDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILA 3
RDFVPD E Y SLI+G LQK +P A +TLEKMLKSSHLP+TS FHSILA
Sbjct: 464 RDFVPDMETYNSLIEGFLQKREPGFAYKTLEKMLKSSHLPKTSTFHSILA 513
Score = 80.1 bits (196), Expect = 4e-12
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Frame = -1
Query: 1205 FNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKRGRTNMARNLYDEM- 1029
FN+L+ + AG +E+L VF M +L V P T++ L+ L +RG A L+D++
Sbjct: 327 FNTLMSAHCNAGKLEEALHVFEKMSNLRVQPDSATYSVLIRSLCQRGDFMKAEELFDDLW 386
Query: 1028 -----LSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVITYNTIVDGL 864
+ G P +N + C N ++ + F+++ + + D + ++ G
Sbjct: 387 KNEILVKEVGCVPLVAAYNPMFEFLCGNGRTEKADKVFRQMLK-RGTQDPPAFKILILGH 445
Query: 863 CRAGKVDIARNVVKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEEMISRGLKP 684
C+ G V +++ M RD P++ TY +LI GF K+E A LE+M+ P
Sbjct: 446 CKEGTVQAGYDLLVLMLR--RDFVPDMETYNSLIEGFLQKREPGFAYKTLEKMLKSSHLP 503
Query: 683 NRITYNTLIKGL----CEAQRFDKIKEILE 606
T+++++ L C + IK +LE
Sbjct: 504 KTSTFHSILAALVQEGCAHEAASFIKMMLE 533