BLASTX nr result
ID: Ziziphus21_contig00007787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00007787
(1558 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 664 0.0
ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabi... 663 0.0
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 658 0.0
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 658 0.0
ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 650 0.0
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 650 0.0
ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 645 0.0
ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 645 0.0
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 644 0.0
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1 is... 639 e-180
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 629 e-177
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 627 e-177
gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gos... 619 e-174
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 619 e-174
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 619 e-174
ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [G... 613 e-172
ref|XP_010068690.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 606 e-170
ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polyme... 606 e-170
gb|KCW64486.1| hypothetical protein EUGRSUZ_G02092 [Eucalyptus g... 606 e-170
ref|XP_010066561.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 605 e-170
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 664 bits (1713), Expect = 0.0
Identities = 318/478 (66%), Positives = 389/478 (81%), Gaps = 5/478 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGG-RYYAIVQFTSTRDAE 1245
M +T++VSGFPSS +A V+ FLE+HTG GTV A+K+R+ + GG R YAIVQFT+TR AE
Sbjct: 1 MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAE 60
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+SLA RLWYG SYLNAR MD DI+ +PR++LH++E++T+HFG Q SKEKFS +W
Sbjct: 61 QIISLANPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGN 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSV+FG+G+RK++F + AEYKL L +ENIWQIELHRP QTVKYLLIQLYGAPRIY
Sbjct: 121 NVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
E+DVPSS NV+EDP+LN+F+D PD+QWVR TDFTPSC IG SS+LCLELP+ +LPNF E
Sbjct: 181 ERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNE 240
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF YYKE+EG F LE+G FS N DLVPIVGP V+LPY+I+F++N L+Q GCL G L
Sbjct: 241 NFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSML 300
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D FYRLVDP R+ V CIE+AL+KLY+LKECCYEPS W E+Y+KY S PP+SP++SL
Sbjct: 301 DDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSL 360
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
DAGLVYV +VQITPCKV+F GPE+NVSNRVLR Y IDNFLR+SFVDEEL+K++STD+S
Sbjct: 361 DAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDVS 420
Query: 164 P----RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
P RN +T +Y R+LS L++GIVIG+KKFEFLAFSSSQLR+NS WMFA G+T
Sbjct: 421 PRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLT 478
>ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
gi|587864166|gb|EXB53859.1| RNA-dependent RNA polymerase
1 [Morus notabilis]
Length = 1133
Score = 663 bits (1710), Expect = 0.0
Identities = 329/477 (68%), Positives = 387/477 (81%), Gaps = 6/477 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGG-RYYAIVQFTSTRDAE 1245
MG+TIQ+SGFPS VSAE VK+FLE HTG GTVYAIK+R KNGG R YAIVQF + AE
Sbjct: 1 MGKTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGSRSYAIVQFMTVETAE 60
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+ LA RLWYG SYL AR M+ DIV KPR L+SL+N+T+HFGCQISKEKFS LW+
Sbjct: 61 LIIRLANPRLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVG 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSVDFG+GLR++ F+ Y EY+LQL YEN+WQIELHRP QT KYLLIQL GAPR+Y
Sbjct: 121 NVSVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPRVY 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
EK+V S ++ E+P+ N+FKDTPDDQWVRATDFT SC IG SSAL LELP G LP+ +E
Sbjct: 181 EKEVRISFDILENPLFNYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVDLPDLRE 240
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF YYKESE RF LE+G FS NLDLVPIVGPP ++LP++ +FKIN LLQ GCL+GP+L
Sbjct: 241 NFVYYKESEERFILESGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGPTL 300
Query: 524 DAAFYRLVDPRRI-NVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMIS 348
D FYRLVDP+RI NV CI +AL+KL+NLKEC YEP+ WL E+YRKY + RPPK P I+
Sbjct: 301 DVDFYRLVDPQRIRNVDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPAIA 360
Query: 347 LDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDL 168
LD+GLVYVRRVQ+TP KVYF GPEINVSNRVLR Y ++ID FLR+SFVDEEL+K++STDL
Sbjct: 361 LDSGLVYVRRVQVTPSKVYFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFSTDL 420
Query: 167 SPR----NSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDG 9
SPR N +TG+Y+R+LSVLR+GI IG++KFEFLAFSSSQLRDNS WMFA DG
Sbjct: 421 SPRTSNANEDRRTGIYRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDG 477
>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 658 bits (1697), Expect = 0.0
Identities = 317/478 (66%), Positives = 386/478 (80%), Gaps = 5/478 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKN-GGRYYAIVQFTSTRDAE 1245
M +T+QVSGFPSS +A V+ FLE++TG GTV A+K+R+ + G R YAIVQFT+TR E
Sbjct: 1 MSKTVQVSGFPSSATAGAVQVFLESYTGGGTVEALKIRETRTRGARKYAIVQFTTTRATE 60
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+SLA RLWYG SYLNAR MD DI+ +PR+ LH++E++T+HFG Q SKEKFS +W
Sbjct: 61 QIISLANQRLWYGRSYLNARPMDRDIIPQPRSSLHTMESVTLHFGYQTSKEKFSAVWSGN 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSV+FG+G+RK++F + AEYKL L +ENIWQIELHRP QTVKYLLIQLYGAPRIY
Sbjct: 121 NVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
E++VPSS N++EDP+LN+F+D PD+QWVR TDFTPSC IG SS+LCLELPS +LPNF E
Sbjct: 181 EREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNFNE 240
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF YYKE+EG F LE+G FS N DLVPIVGP V+LPY+I+F++N L+Q GCL G L
Sbjct: 241 NFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSML 300
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D FYRLVDP R+ V CIEHAL+KLY+LKECCYEPS W E+YRKY S PP+SP++SL
Sbjct: 301 DDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPVLSL 360
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
DAGLVYV +VQITPCKV+F GPE+N+SNRVLR Y IDNFLR+SFVDEEL+K++STD+S
Sbjct: 361 DAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHSTDVS 420
Query: 164 P----RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
P RN +T +Y R+LS LR+GIVIG+KKFEFLAFSSSQLR+NS WMFA G+T
Sbjct: 421 PRTSSRNELRRTAIYNRILSTLRNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLT 478
>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 658 bits (1697), Expect = 0.0
Identities = 317/478 (66%), Positives = 386/478 (80%), Gaps = 5/478 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKN-GGRYYAIVQFTSTRDAE 1245
M +T+QVSGFPSS +A V+ FLE++TG GTV A+K+R+ + G R YAIVQFT+TR E
Sbjct: 1 MSKTVQVSGFPSSATAGAVQVFLESYTGGGTVEALKIRETRTRGARKYAIVQFTTTRATE 60
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+SLA RLWYG SYLNAR MD DI+ +PR+ LH++E++T+HFG Q SKEKFS +W
Sbjct: 61 QIISLANQRLWYGRSYLNARPMDRDIIPQPRSSLHTMESVTLHFGYQTSKEKFSAVWSGN 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSV+FG+G+RK++F + AEYKL L +ENIWQIELHRP QTVKYLLIQLYGAPRIY
Sbjct: 121 NVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
E++VPSS N++EDP+LN+F+D PD+QWVR TDFTPSC IG SS+LCLELPS +LPNF E
Sbjct: 181 EREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNFNE 240
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF YYKE+EG F LE+G FS N DLVPIVGP V+LPY+I+F++N L+Q GCL G L
Sbjct: 241 NFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSML 300
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D FYRLVDP R+ V CIEHAL+KLY+LKECCYEPS W E+YRKY S PP+SP++SL
Sbjct: 301 DDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPVLSL 360
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
DAGLVYV +VQITPCKV+F GPE+N+SNRVLR Y IDNFLR+SFVDEEL+K++STD+S
Sbjct: 361 DAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHSTDVS 420
Query: 164 P----RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
P RN +T +Y R+LS LR+GIVIG+KKFEFLAFSSSQLR+NS WMFA G+T
Sbjct: 421 PRTSSRNELRRTAIYNRILSTLRNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLT 478
>ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596568|ref|XP_012072322.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596570|ref|XP_012072324.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1127
Score = 650 bits (1677), Expect = 0.0
Identities = 316/478 (66%), Positives = 385/478 (80%), Gaps = 5/478 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRY-YAIVQFTSTRDAE 1245
MG+TIQV GFPS V+ + VKKFLE+H+GEGTV+A+K+R+ KN GR YAIVQF + RDAE
Sbjct: 1 MGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGRRKYAIVQFQTARDAE 60
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+SL RL YGTSYL AR +D DIV KPRT+LHS+++IT+HFGCQISKEKFSVLW
Sbjct: 61 LIISLTNKRLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGT 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSV+FG G+RK+ F + YKL+LSYEN+WQ+ELH P ++VKYLLIQLYGAPRI+
Sbjct: 121 NVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPRIF 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
EK++ ++ NV+E P+ N KDTPD+QWVR DFTP C IG SS LCLE PS +P F+E
Sbjct: 181 EKEI-ATFNVFEIPLFNDLKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQE 239
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF+YYKESEG F LE G FS NLDLVPIVGPP V LP++I+F++N L+Q GCL G +L
Sbjct: 240 NFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCLPGSAL 299
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D++FY LVDP +N+ CIEHAL KL++LKECCY+PS WL E+YRKY KSK P+SP ISL
Sbjct: 300 DSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCHPRSPSISL 359
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
+GLVY+RRVQITPCKVYF GPE+NVSNRV+RHY I+NFLR+SFVDEEL+K+YSTDL
Sbjct: 360 GSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYSKDINNFLRVSFVDEELEKIYSTDLC 419
Query: 164 PR----NSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
PR N +T +YKR+LS L++GIVIGNK+FEFLAFSSSQLR+NS WMFA DG+T
Sbjct: 420 PRASSGNGDRRTAIYKRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGLT 477
>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1144
Score = 650 bits (1677), Expect = 0.0
Identities = 316/478 (66%), Positives = 385/478 (80%), Gaps = 5/478 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRY-YAIVQFTSTRDAE 1245
MG+TIQV GFPS V+ + VKKFLE+H+GEGTV+A+K+R+ KN GR YAIVQF + RDAE
Sbjct: 18 MGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGRRKYAIVQFQTARDAE 77
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+SL RL YGTSYL AR +D DIV KPRT+LHS+++IT+HFGCQISKEKFSVLW
Sbjct: 78 LIISLTNKRLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGT 137
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSV+FG G+RK+ F + YKL+LSYEN+WQ+ELH P ++VKYLLIQLYGAPRI+
Sbjct: 138 NVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPRIF 197
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
EK++ ++ NV+E P+ N KDTPD+QWVR DFTP C IG SS LCLE PS +P F+E
Sbjct: 198 EKEI-ATFNVFEIPLFNDLKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQE 256
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF+YYKESEG F LE G FS NLDLVPIVGPP V LP++I+F++N L+Q GCL G +L
Sbjct: 257 NFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCLPGSAL 316
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D++FY LVDP +N+ CIEHAL KL++LKECCY+PS WL E+YRKY KSK P+SP ISL
Sbjct: 317 DSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCHPRSPSISL 376
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
+GLVY+RRVQITPCKVYF GPE+NVSNRV+RHY I+NFLR+SFVDEEL+K+YSTDL
Sbjct: 377 GSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYSKDINNFLRVSFVDEELEKIYSTDLC 436
Query: 164 PR----NSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
PR N +T +YKR+LS L++GIVIGNK+FEFLAFSSSQLR+NS WMFA DG+T
Sbjct: 437 PRASSGNGDRRTAIYKRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGLT 494
>ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596581|ref|XP_012072328.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1126
Score = 645 bits (1665), Expect = 0.0
Identities = 313/478 (65%), Positives = 383/478 (80%), Gaps = 5/478 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGG-RYYAIVQFTSTRDAE 1245
MG+TI V GFP V+ + VKK LE+H+G+GTV+A+K+R+ KNGG R YAIVQF + RDAE
Sbjct: 1 MGKTIHVYGFPPDVTVDEVKKCLESHSGDGTVFAMKIRETKNGGQRKYAIVQFQTARDAE 60
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+SL K R+ YGTSYL AR++ DIV PRT+LHS+++IT+HFGC+ISKEKFSVLW
Sbjct: 61 LIISLNK-RIRYGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWTGT 119
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSV+FG GLRK+ F ++ +YKL LSYEN+WQIELH P ++VKYLLIQLYGAPRI+
Sbjct: 120 NVSVNFGFGLRKLQFFLSHEQMDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPRIF 179
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
EK++ SS NV+E P+ N+FKDTPD+QWVR DFTP C IG SS LCLE PS +P F+E
Sbjct: 180 EKEIASS-NVFESPLFNYFKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQE 238
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF+YYKESE F LE G FSCNLDLVPIVGPP V LP++I+F++N L+Q GCL G +L
Sbjct: 239 NFSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSGVDLPFEILFRVNLLVQHGCLPGSAL 298
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D++FY+LVDP R+N+ CIEHAL+KL++LKECCYEPS WL E+YRKY SK P+SP ISL
Sbjct: 299 DSSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEPSMWLNEQYRKYLTSKYLPRSPSISL 358
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
D GL YVRR QITPCK YF GPE+NVSNRV+R Y I+NFLR+SFVDEEL K++STDLS
Sbjct: 359 DTGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYSKDINNFLRVSFVDEELGKIHSTDLS 418
Query: 164 PR----NSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
PR N +T +Y R+LS L++GIVIGNK+FEFLAFSSSQLR+NS WMFA DG+T
Sbjct: 419 PRASSGNGDRRTAIYNRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGLT 476
>ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1150
Score = 645 bits (1665), Expect = 0.0
Identities = 313/478 (65%), Positives = 383/478 (80%), Gaps = 5/478 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGG-RYYAIVQFTSTRDAE 1245
MG+TI V GFP V+ + VKK LE+H+G+GTV+A+K+R+ KNGG R YAIVQF + RDAE
Sbjct: 25 MGKTIHVYGFPPDVTVDEVKKCLESHSGDGTVFAMKIRETKNGGQRKYAIVQFQTARDAE 84
Query: 1244 TIVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+SL K R+ YGTSYL AR++ DIV PRT+LHS+++IT+HFGC+ISKEKFSVLW
Sbjct: 85 LIISLNK-RIRYGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWTGT 143
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVSV+FG GLRK+ F ++ +YKL LSYEN+WQIELH P ++VKYLLIQLYGAPRI+
Sbjct: 144 NVSVNFGFGLRKLQFFLSHEQMDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPRIF 203
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
EK++ SS NV+E P+ N+FKDTPD+QWVR DFTP C IG SS LCLE PS +P F+E
Sbjct: 204 EKEIASS-NVFESPLFNYFKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQE 262
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF+YYKESE F LE G FSCNLDLVPIVGPP V LP++I+F++N L+Q GCL G +L
Sbjct: 263 NFSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSGVDLPFEILFRVNLLVQHGCLPGSAL 322
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D++FY+LVDP R+N+ CIEHAL+KL++LKECCYEPS WL E+YRKY SK P+SP ISL
Sbjct: 323 DSSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEPSMWLNEQYRKYLTSKYLPRSPSISL 382
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
D GL YVRR QITPCK YF GPE+NVSNRV+R Y I+NFLR+SFVDEEL K++STDLS
Sbjct: 383 DTGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYSKDINNFLRVSFVDEELGKIHSTDLS 442
Query: 164 PR----NSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
PR N +T +Y R+LS L++GIVIGNK+FEFLAFSSSQLR+NS WMFA DG+T
Sbjct: 443 PRASSGNGDRRTAIYNRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGLT 500
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 644 bits (1660), Expect = 0.0
Identities = 315/473 (66%), Positives = 385/473 (81%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TIQVS FPS+V AE VK FLE +TG+ TVYA+K+R+ KNGGR YAIVQFT + DAE
Sbjct: 1 MGKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAEL 60
Query: 1241 IVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKREN 1062
I+ L RL+YG+SYL AR M+ DIV KPRT+LH++E +T+HFGCQ+S EKF VLW+ +
Sbjct: 61 IIRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVD 120
Query: 1061 VSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIYE 882
V+V+FG+G+RK+ F + EY+L L YENIWQIELHRP QT KYLLIQL+GAPRIYE
Sbjct: 121 VTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIYE 180
Query: 881 KDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKEN 702
KDV SSG V+E+P+LN+F D PDDQWVR TDFT S IGQSS LCLELP +LPNF+EN
Sbjct: 181 KDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFREN 240
Query: 701 FAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSLD 522
FAYYKESEG+F LE+G +S NL+LVPIVGP L + LPY+I+FKIN L+Q GC+ GP+LD
Sbjct: 241 FAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPALD 300
Query: 521 AAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISLD 342
A FYRLV+P RI+ I+HAL+KLY LKECC+EPS WL E+Y+ Y SK+ P SP+ISLD
Sbjct: 301 ANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVISLD 360
Query: 341 AGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLSP 162
GLV VRRVQITP +VYF GPEINVSNRVLRH+ + IDNFLRI+FVDEEL+K++STDL
Sbjct: 361 DGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTDLLT 420
Query: 161 RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
RN T+ +Y R+LS L++GIVIG+K+FEFLAFSSSQLR+NS WMFA +G+T
Sbjct: 421 RNRITE--IYGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLT 471
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Fragaria vesca
subsp. vesca]
Length = 1119
Score = 639 bits (1647), Expect = e-180
Identities = 316/471 (67%), Positives = 377/471 (80%), Gaps = 1/471 (0%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TIQ+ GFPS +AE +K+FLE HTGEG+V+A+KLR K+GGR+YAI+QF S AE
Sbjct: 1 MGKTIQLHGFPSGQTAENIKEFLEKHTGEGSVFALKLRPAKSGGRFYAIIQFQSISQAEK 60
Query: 1241 IVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKREN 1062
I+SLA RLWYG SYLNAR DIV KPRT+LHSL ++ +H GCQ++K+KFSVLW
Sbjct: 61 IISLANARLWYGRSYLNARPAH-DIVPKPRTFLHSLRDLVLHVGCQVAKDKFSVLWGTAE 119
Query: 1061 VSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIYE 882
VSVDFG G+R + F +Y+ Y+LQLSYENIWQIELH ++ KYL+IQLYG PRIY+
Sbjct: 120 VSVDFGFGMRNLQFRLLYRQKVYRLQLSYENIWQIELHHQRGRSAKYLVIQLYGNPRIYQ 179
Query: 881 KDVPSSG-NVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
++V SSG N YED +N+F+D PDD WVR TDFTP IGQSS+LCL L S LP+F+E
Sbjct: 180 QEVCSSGGNGYED--MNYFRD-PDD-WVRTTDFTPGSCIGQSSSLCLVLTSDGELPDFEE 235
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NFAYYK+++G+F LE G FS N DLVPIVG P + LPYDI+FKIN L+QQGCL+GP+L
Sbjct: 236 NFAYYKKTDGQFILENGSTFSRNRDLVPIVGSPAGIDLPYDILFKINLLVQQGCLSGPTL 295
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D FYRLVDPRRI+ CIE ALDKL NLKE CYEP+ WL E YRKY SK+PPK +ISL
Sbjct: 296 DNNFYRLVDPRRISRPCIEFALDKLSNLKESCYEPAVWLNEEYRKYMMSKKPPKPALISL 355
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
D+GLVYVRRVQITP KVYF GPE+NVSNR+LR Y + IDNFLR+SFVDEE++K+YSTDLS
Sbjct: 356 DSGLVYVRRVQITPSKVYFSGPEVNVSNRILRQYSSDIDNFLRVSFVDEEMEKLYSTDLS 415
Query: 164 PRNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSD 12
PR S KT +Y RVLSVLRDGIV+G KKFEFLAFSSSQLR+NS WMFAP+D
Sbjct: 416 PRTSTRKTRIYNRVLSVLRDGIVVGKKKFEFLAFSSSQLRENSLWMFAPTD 466
>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
max] gi|571439308|ref|XP_006574822.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
max] gi|571439310|ref|XP_006574823.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
max] gi|734360586|gb|KHN15461.1| RNA-dependent RNA
polymerase 1 [Glycine soja] gi|947122157|gb|KRH70363.1|
hypothetical protein GLYMA_02G086100 [Glycine max]
Length = 1125
Score = 629 bits (1623), Expect = e-177
Identities = 299/474 (63%), Positives = 383/474 (80%), Gaps = 4/474 (0%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNG-GRYYAIVQFTSTRDAE 1245
MG+TI++ GFP+SV+ VK F+E +TGEGTV+AIKLR K R +AI+QFT+ A
Sbjct: 1 MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTTANSAT 60
Query: 1244 TIVSLAKV---RLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLW 1074
+++S A L YGTSYL AR M+ DIV +PR +LHSL+++ + FGCQISK +FSVLW
Sbjct: 61 SMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLW 120
Query: 1073 KRENVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAP 894
K+++V V+FG G+RKM+F F + +YKL+LSYENIW+IELHRP +T +YLLIQL GAP
Sbjct: 121 KKQDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGAP 180
Query: 893 RIYEKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPN 714
R++E DVP+S N+++DP+ NFFKD PD+QW+RA DFTP RIGQSSA+CLELP+G +LPN
Sbjct: 181 RVFENDVPTSTNIFDDPLFNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQLPN 240
Query: 713 FKENFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTG 534
F+ENFAYY+ESE +++L+TG PFS N LVPIV PPL V + YDI+FK+N+L+Q CL G
Sbjct: 241 FRENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACLAG 300
Query: 533 PSLDAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPM 354
P+LD FYRLVDPRR+ IE+AL+K+Y KE CYEP+ WL ++Y+ Y +SK P+SP
Sbjct: 301 PALDGDFYRLVDPRRMPREFIEYALEKIYYSKEFCYEPTKWLTDQYKTYLESKNHPRSPA 360
Query: 353 ISLDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYST 174
ISLD GLVYVRRVQITPCKVYF GPE+NVSNRVLRH+ HIDNFLR+SFVDEELDK++ST
Sbjct: 361 ISLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDEELDKLFST 420
Query: 173 DLSPRNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSD 12
DLS R+ KT +Y R+LS+L++GIV+G+KKFEFLAFSSSQLR+NS WMFAP++
Sbjct: 421 DLSSRSQNKKTEIYTRILSILKNGIVVGDKKFEFLAFSSSQLRENSLWMFAPTE 474
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 627 bits (1618), Expect = e-177
Identities = 310/482 (64%), Positives = 381/482 (79%), Gaps = 9/482 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNG-GRYYAIVQFTSTRDAE 1245
MG+TIQV GFP+ V+AE VK FLE+ TG GTVYA+KLR K G GR YAIVQFT+ A+
Sbjct: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAAD 60
Query: 1244 TIVSLA--KVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWK 1071
TI+SLA +LWYG SYLNAR M+ D V +PRT++H++E+I +HFGC+IS EKF+VLW+
Sbjct: 61 TIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWR 120
Query: 1070 RENVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPR 891
NV+V+FG G+RK+ F + EY+L+L YENIW+IELH P Q KYLLIQL GAPR
Sbjct: 121 GVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPR 180
Query: 890 IYEKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNF 711
I++K + S +YE P+ NFFK+ PDDQWVR TDFTPS IGQS+ LC+ELP LP+F
Sbjct: 181 IFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDF 240
Query: 710 KENFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGP 531
KENFAYYKESE RF LETG +S +LDLVPIVGPP + LPY+I+FKIN L+Q GC+ GP
Sbjct: 241 KENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGP 300
Query: 530 SLDAAFYRLVDPRR--INVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSP 357
LD+ FYRLVDP R ++++CIEHALDKLY+LKECCYEPS WL ++YRKY S+ P SP
Sbjct: 301 LLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSP 360
Query: 356 MISLDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYS 177
ISLD GLVYV RVQ+TP +VYF GPEINVSNRVLRH+ IDNFLRISF+DE+LDK++S
Sbjct: 361 AISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHS 420
Query: 176 TDLSPRNSA----TKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDG 9
TDLSPR S+ T+T +Y R+LS LR+GI+IG++KFEFLAFSSSQLR++S WMFA G
Sbjct: 421 TDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYG 480
Query: 8 IT 3
+T
Sbjct: 481 LT 482
>gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gossypium arboreum]
gi|728850182|gb|KHG29625.1| RNA-dependent RNA polymerase
1 -like protein [Gossypium arboreum]
Length = 1110
Score = 619 bits (1596), Expect = e-174
Identities = 303/473 (64%), Positives = 374/473 (79%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TIQV GF S VSA VK FLE +TG TVYA+K+R+ K GR YAIVQFT + DA
Sbjct: 1 MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSGRAYAIVQFTRSSDAGL 60
Query: 1241 IVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKREN 1062
I+ LA RL+YG SYL AR M+TDIV KPR +LH++E +TV+FGCQ+S+EKF VLWK +N
Sbjct: 61 IIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADN 120
Query: 1061 VSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIYE 882
V+++FG G+RK+ F Y ++YKL+L YENIWQIEL P QT K+LLIQL+GAPRIYE
Sbjct: 121 VTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIYE 180
Query: 881 KDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKEN 702
+V +S V++DP+LN+FKD PDDQWVR TDFT S IGQSS LCLELP +LPNF+EN
Sbjct: 181 TEVRASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNFREN 240
Query: 701 FAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSLD 522
FAYYKE+EGR LE+G +SCNL LVPIV P + LP++I+FK+N L+Q GC+ GP+LD
Sbjct: 241 FAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPALD 300
Query: 521 AAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISLD 342
FYRLVDP R++ I+HAL+KLY L+ECCYEPS WL+E Y+ + +S++ SP ISLD
Sbjct: 301 DTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLD 360
Query: 341 AGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLSP 162
GLVYVRRVQITP +VYF GPEINVSNRVLR + N IDNFLRISFVDEEL+K++ST++
Sbjct: 361 EGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQA 420
Query: 161 RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
R +TG+YKR+LS LR+GIVIGNK+FEFLAFSSSQLR+NS WMFA G+T
Sbjct: 421 R--GRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLT 471
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 619 bits (1596), Expect = e-174
Identities = 303/473 (64%), Positives = 375/473 (79%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TIQV GF S VSA VK FLE +TG TVYA+K+R+ K GR +AIVQFT + DA
Sbjct: 1 MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGL 60
Query: 1241 IVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKREN 1062
I+ LA RL+YG SYL AR M+TDIV KPR +LH++E +TV+FGCQ+S+EKF VLWK +N
Sbjct: 61 IIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADN 120
Query: 1061 VSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIYE 882
V+++FG G+RK+ F Y ++YKL+L YENIWQIEL P QT K+LLIQL+GAPRIYE
Sbjct: 121 VTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIYE 180
Query: 881 KDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKEN 702
K+VP+S V++DP+LN+FKD PDDQWVR TDFT S IGQSS L LELP +LPNF+EN
Sbjct: 181 KEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQLPNFREN 240
Query: 701 FAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSLD 522
FAYYKE+EGR LE+G +SCNL LVPIV P + LP++I+FK+N L+Q GC+ GP+LD
Sbjct: 241 FAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPALD 300
Query: 521 AAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISLD 342
FYRLVDP R++ I+HAL+KLY L+ECCYEPS WL+E Y+ + +S++ SP ISLD
Sbjct: 301 DTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLD 360
Query: 341 AGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLSP 162
GLVYVRRVQITP +VYF GPEINVSNRVLR + N IDNFLRISFVDEEL+K++ST++
Sbjct: 361 EGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQA 420
Query: 161 RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
R +TG+YKR+LS LR+GIVIGNK+FEFLAFSSSQLR+NS WMFA G+T
Sbjct: 421 R--GRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLT 471
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 619 bits (1595), Expect = e-174
Identities = 302/473 (63%), Positives = 374/473 (79%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TIQV GF S VSA VK FLE +TG TVYA+K+R+ K GR +AIVQFT + DA
Sbjct: 1 MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGL 60
Query: 1241 IVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKREN 1062
I+ LA RL+YG SYL AR M+TDIV KPR +LH++E +TV+F C +S+EKF VLWK +N
Sbjct: 61 IIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKADN 120
Query: 1061 VSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIYE 882
V+++FG G+RK+ F Y ++YKL+L YENIWQIEL P QT K+LLIQL+GAPRIYE
Sbjct: 121 VTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIYE 180
Query: 881 KDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKEN 702
K+VP+S V++DP+LN+FKD PDDQWVR TDFT S IGQSS LCLELP +LPNF+EN
Sbjct: 181 KEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNFREN 240
Query: 701 FAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSLD 522
FAYYKE+EGR LE+G +SCNL LVPIV P + LP++I+FK+N L+Q GC+ GP+LD
Sbjct: 241 FAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPALD 300
Query: 521 AAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISLD 342
FYRLVDP R++ I+HAL+KLY L+ECCYEPS WL+E Y+ + +S++ SP ISLD
Sbjct: 301 DTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLD 360
Query: 341 AGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLSP 162
GLVYVRRVQITP +VYF GPEINVSNRVLR + N IDNFLRISFVDEEL+K++ST++
Sbjct: 361 EGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQA 420
Query: 161 RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
R +TG+YKR+LS LR+GIVIGNK+FEFLAFSSSQLR+NS WMFA G+T
Sbjct: 421 R--GRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLT 471
>ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [Gossypium raimondii]
gi|763812161|gb|KJB79013.1| hypothetical protein
B456_013G029000 [Gossypium raimondii]
Length = 1110
Score = 613 bits (1580), Expect = e-172
Identities = 300/473 (63%), Positives = 373/473 (78%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TIQV GF S+VSA VK FLE +TG TVYA+K+R+ K GGR YAIVQFT + AE
Sbjct: 1 MGKTIQVYGFLSNVSAGEVKTFLEGYTGRETVYALKIRQHKKGGRAYAIVQFTRSSAAEL 60
Query: 1241 IVSLAKVRLWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKREN 1062
I+ LA RL+YG SYL AR M+TDIV KPR +LH++E +TV+FGCQ+S EKF VLWK EN
Sbjct: 61 IIRLANQRLYYGRSYLKAREMETDIVPKPRAFLHTMERVTVNFGCQVSVEKFYVLWKAEN 120
Query: 1061 VSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIYE 882
V+++FG G+RK+ F Y ++YKL+L YENIWQIEL P QT K+LLIQL+GAPRIYE
Sbjct: 121 VTLNFGTGMRKLEFLVSYCRSKYKLELFYENIWQIELRCPDSQTSKHLLIQLFGAPRIYE 180
Query: 881 KDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKEN 702
K+V +S V++DP+LN+FKD PDDQWVR TDFT S IGQSS LCLELP RLPNF+EN
Sbjct: 181 KEVRASELVFDDPLLNYFKDVPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLRLPNFREN 240
Query: 701 FAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSLD 522
FAYYKE+E R LE+G +SCNL LVPIV P + LP++I+FK+N L+Q GC+ GP+LD
Sbjct: 241 FAYYKENESRLVLESGSSYSCNLSLVPIVCPLRVIDLPFEILFKVNLLVQNGCIPGPALD 300
Query: 521 AAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISLD 342
FYRLVDP R++ I+HAL+KLY L+ECCYEPS WL+E Y+ + +S++ SP ISLD
Sbjct: 301 DTFYRLVDPCRMDKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPAISLD 360
Query: 341 AGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLSP 162
GLVYVRRVQITP +VYF GPEINVSNRVLR + N IDNFLRISFVDEEL+K++S ++
Sbjct: 361 EGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSINVQA 420
Query: 161 RNSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
R +T +Y+R+LS LR+G++IG+K+FEFLAFSSSQLR+NS WMFA G+T
Sbjct: 421 R--GRRTSIYERILSTLRNGVLIGDKRFEFLAFSSSQLRENSAWMFASRKGLT 471
>ref|XP_010068690.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Eucalyptus grandis]
Length = 1093
Score = 606 bits (1562), Expect = e-170
Identities = 300/476 (63%), Positives = 363/476 (76%), Gaps = 3/476 (0%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TI V GFPS V+ + V+ LE TG GT+YAIK+R+ K G R YAIVQF + AE
Sbjct: 1 MGKTINVHGFPSLVTVDTVRGCLEQRTGRGTIYAIKVRQDKRGVRSYAIVQFMNAEHAEL 60
Query: 1241 IVSLAKVR-LWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+ LA + LWYG SYL AR ++ DIV +PRT LHS+E IT+HFGCQ+S ++FS LWK
Sbjct: 61 IILLASRKDLWYGRSYLTARRVEHDIVQRPRTLLHSMEGITLHFGCQVSSKRFSTLWKGV 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVS++FG+G+RK F Y EYKL+LSYENIWQIELHR YL+IQLYGAP I
Sbjct: 121 NVSLNFGLGMRKFCFLLSYHNTEYKLKLSYENIWQIELHRARGHKTMYLVIQLYGAPYIR 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
+K V S +V + NFFKD DDQWVRA DFTPS IGQSSA+CLE+P +LPNF+E
Sbjct: 181 KKVVQDSVDVLVSYLYNFFKDGSDDQWVRAIDFTPSACIGQSSAVCLEIPCEYQLPNFQE 240
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF YKE++G S+E G PFSC+ DLVPIVGPP V LPY+IIFKIN L+Q GCL GPSL
Sbjct: 241 NFVNYKETDGTLSMENGSPFSCSADLVPIVGPPRGVDLPYEIIFKINLLVQNGCLAGPSL 300
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D +FYR+VDP + + I ALDKL++LKECCYEPS WL E+++KY S+ K ISL
Sbjct: 301 DLSFYRMVDPGSMEMDIILDALDKLFHLKECCYEPSQWLIEQHKKYLTSRHSTKLSSISL 360
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
DAGLVYV RVQITPC+VYFFGPEINVSN VLR Y +IDNF+RISFVDE+LDKMYSTDLS
Sbjct: 361 DAGLVYVHRVQITPCRVYFFGPEINVSNHVLRRYSKYIDNFIRISFVDEDLDKMYSTDLS 420
Query: 164 PRNSA--TKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
PR ++ +T +Y+R+LS+L++GI IG+K FEFLAFSSSQLR+NS WMFAP+DG T
Sbjct: 421 PRTASGHGRTDIYERILSILKNGIKIGDKHFEFLAFSSSQLRENSAWMFAPTDGTT 476
>ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
Length = 1123
Score = 606 bits (1562), Expect = e-170
Identities = 305/481 (63%), Positives = 373/481 (77%), Gaps = 8/481 (1%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
M +TIQ+ GFPS +SAE V +FLE TG+ +VYA+KLR+ +N YYAIVQF + DAE
Sbjct: 1 MVKTIQLYGFPSGLSAEAVSEFLEPITGKESVYAVKLREAQNKRMYYAIVQFAKSNDAED 60
Query: 1241 IVSLAKVR-LWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+S+A L YG +YLNAR M+ DIV +PRT+LH LE+I +HFGC+I+ EK VLW
Sbjct: 61 IISMANNNALRYGRNYLNARKMERDIVPRPRTFLHRLEDIGLHFGCKIAHEKLHVLWTAN 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRP-SRQTVKYLLIQLYGAPRI 888
+VSVDFGI LRK F Y EYKLQLSYENI++IE+H P R KYLLIQL GAPRI
Sbjct: 121 DVSVDFGIKLRKFIFLLKYHDLEYKLQLSYENIYKIEVHSPRGRTAAKYLLIQLCGAPRI 180
Query: 887 YEKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFK 708
Y+KDV SG VYE+P LN+F+DTPDDQWVR TDFTP IGQS LCLELP G +LP+F+
Sbjct: 181 YKKDVRCSGEVYENPFLNYFRDTPDDQWVRTTDFTPPRAIGQSFTLCLELPYGLKLPDFQ 240
Query: 707 ENFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPS 528
ENF YKES G + LE+G +SCN DL +V PP V +PYDI+FK+N+L+Q G L GP+
Sbjct: 241 ENFPEYKESIGEYILESGSSYSCNPDLGAMVCPPPGVDVPYDILFKVNSLVQHGYLPGPA 300
Query: 527 LDAAFYRLVDPRR--INVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPM 354
LD F+RL+DPRR +N+ACIE AL+KL++LKE C EPS WL E+YRKY SK+PP SP+
Sbjct: 301 LDVTFFRLLDPRRMNMNLACIEFALEKLFHLKESCSEPSVWLKEQYRKYLTSKKPPLSPI 360
Query: 353 ISLDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYST 174
+SLD+GLVYVRRVQIT C+VY GPE+NVSNRVLR+YP IDNF+R+SFVDEELDK++++
Sbjct: 361 MSLDSGLVYVRRVQITSCQVYCCGPEVNVSNRVLRNYPGDIDNFIRVSFVDEELDKLFAS 420
Query: 173 DLSPR----NSATKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGI 6
DLSPR N KT +YKR+LS+LR+GIVIG KKFEFLAFSSSQLR+NS WMFA G+
Sbjct: 421 DLSPRTSNANGENKTDIYKRILSILRNGIVIGEKKFEFLAFSSSQLRENSMWMFASRRGL 480
Query: 5 T 3
T
Sbjct: 481 T 481
>gb|KCW64486.1| hypothetical protein EUGRSUZ_G02092 [Eucalyptus grandis]
Length = 809
Score = 606 bits (1562), Expect = e-170
Identities = 300/476 (63%), Positives = 363/476 (76%), Gaps = 3/476 (0%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TI V GFPS V+ + V+ LE TG GT+YAIK+R+ K G R YAIVQF + AE
Sbjct: 1 MGKTINVHGFPSLVTVDTVRGCLEQRTGRGTIYAIKVRQDKRGVRSYAIVQFMNAEHAEL 60
Query: 1241 IVSLAKVR-LWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+ LA + LWYG SYL AR ++ DIV +PRT LHS+E IT+HFGCQ+S ++FS LWK
Sbjct: 61 IILLASRKDLWYGRSYLTARRVEHDIVQRPRTLLHSMEGITLHFGCQVSSKRFSTLWKGV 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVS++FG+G+RK F Y EYKL+LSYENIWQIELHR YL+IQLYGAP I
Sbjct: 121 NVSLNFGLGMRKFCFLLSYHNTEYKLKLSYENIWQIELHRARGHKTMYLVIQLYGAPYIR 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
+K V S +V + NFFKD DDQWVRA DFTPS IGQSSA+CLE+P +LPNF+E
Sbjct: 181 KKVVQDSVDVLVSYLYNFFKDGSDDQWVRAIDFTPSACIGQSSAVCLEIPCEYQLPNFQE 240
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF YKE++G S+E G PFSC+ DLVPIVGPP V LPY+IIFKIN L+Q GCL GPSL
Sbjct: 241 NFVNYKETDGTLSMENGSPFSCSADLVPIVGPPRGVDLPYEIIFKINLLVQNGCLAGPSL 300
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D +FYR+VDP + + I ALDKL++LKECCYEPS WL E+++KY S+ K ISL
Sbjct: 301 DLSFYRMVDPGSMEMDIILDALDKLFHLKECCYEPSQWLIEQHKKYLTSRHSTKLSSISL 360
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
DAGLVYV RVQITPC+VYFFGPEINVSN VLR Y +IDNF+RISFVDE+LDKMYSTDLS
Sbjct: 361 DAGLVYVHRVQITPCRVYFFGPEINVSNHVLRRYSKYIDNFIRISFVDEDLDKMYSTDLS 420
Query: 164 PRNSA--TKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
PR ++ +T +Y+R+LS+L++GI IG+K FEFLAFSSSQLR+NS WMFAP+DG T
Sbjct: 421 PRTASGHGRTDIYERILSILKNGIKIGDKHFEFLAFSSSQLRENSAWMFAPTDGTT 476
>ref|XP_010066561.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Eucalyptus grandis]
Length = 1130
Score = 605 bits (1560), Expect = e-170
Identities = 301/476 (63%), Positives = 363/476 (76%), Gaps = 3/476 (0%)
Frame = -3
Query: 1421 MGRTIQVSGFPSSVSAELVKKFLENHTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAET 1242
MG+TI V GFPS V+ + V+ LE TG GT+YAIK+R+ K G R YAIVQF + AE+
Sbjct: 1 MGKTINVHGFPSLVTVDTVRGCLEQRTGRGTIYAIKVRQDKRGVRSYAIVQFMNADYAES 60
Query: 1241 IVSLAKVR-LWYGTSYLNARSMDTDIVAKPRTYLHSLENITVHFGCQISKEKFSVLWKRE 1065
I+ LA + LWYG SYL AR ++ DIV +PRT HS+E IT+HFGCQ+S ++FS LWK
Sbjct: 61 IILLASRKDLWYGRSYLTARRVEHDIVQRPRTLSHSMEGITLHFGCQVSSKRFSTLWKGV 120
Query: 1064 NVSVDFGIGLRKMYFHFMYQYAEYKLQLSYENIWQIELHRPSRQTVKYLLIQLYGAPRIY 885
NVS++FG+G+RK F Y EYKL+LSYENIWQIELHR YL+IQLYGAP I
Sbjct: 121 NVSLNFGLGMRKFCFLLSYHNTEYKLELSYENIWQIELHRARGHKTMYLVIQLYGAPYIR 180
Query: 884 EKDVPSSGNVYEDPILNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 705
+K V S +V NFFKD DDQWVRA DFTPS IGQSSA+CLE+P LPNF E
Sbjct: 181 KKVVQYSEDVLVSHFYNFFKDGSDDQWVRAIDFTPSACIGQSSAVCLEIPCEYPLPNFHE 240
Query: 704 NFAYYKESEGRFSLETGFPFSCNLDLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPSL 525
NF YKE++G S+E G PFSC+ DLVPIVGPP V LPY+IIFKIN L+Q GCL GPSL
Sbjct: 241 NFVNYKETDGTLSMENGSPFSCSADLVPIVGPPRGVDLPYEIIFKINLLVQNGCLAGPSL 300
Query: 524 DAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLYERYRKYFKSKRPPKSPMISL 345
D +FYR+VDPRR+++ I ALDKL++LKECCYEPS WL E+++KY S+ K ISL
Sbjct: 301 DLSFYRMVDPRRMDMDIILDALDKLFHLKECCYEPSQWLIEQHKKYLTSRHSTKLSSISL 360
Query: 344 DAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRISFVDEELDKMYSTDLS 165
DAGLVYV RVQITPC+VYFFGPEINVSN VLR Y +IDNF+RISFVDE+LDKMYSTDLS
Sbjct: 361 DAGLVYVHRVQITPCRVYFFGPEINVSNHVLRSYSENIDNFIRISFVDEDLDKMYSTDLS 420
Query: 164 PRNSA--TKTGLYKRVLSVLRDGIVIGNKKFEFLAFSSSQLRDNSTWMFAPSDGIT 3
PR ++ +T +Y+R+LS+L++GI IG+K FEFLAFSSSQLR+NS WMFAP+DG T
Sbjct: 421 PRTASGHGRTDIYERILSILKNGIKIGDKHFEFLAFSSSQLRENSAWMFAPTDGTT 476