BLASTX nr result
ID: Ziziphus21_contig00007704
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00007704
(1062 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010098733.1| RNA polymerase sigma factor rpoD [Morus nota... 79 8e-12
ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC ... 78 1e-11
gb|KCW79184.1| hypothetical protein EUGRSUZ_C00620 [Eucalyptus g... 78 1e-11
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ... 78 1e-11
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas] 78 1e-11
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 78 1e-11
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-... 77 3e-11
ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-... 77 3e-11
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 77 3e-11
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC ... 76 5e-11
ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ... 75 1e-10
ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ... 75 1e-10
ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-... 75 1e-10
ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-... 73 3e-10
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 72 8e-10
ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-... 72 1e-09
ref|XP_012450466.1| PREDICTED: RNA polymerase sigma factor sigC-... 72 1e-09
ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-... 72 1e-09
ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-... 72 1e-09
gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium r... 72 1e-09
>ref|XP_010098733.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587886865|gb|EXB75636.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 476
Score = 78.6 bits (192), Expect = 8e-12
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T SKA+NQIQK K+I+ + K PDD+EIAKL GLSL KIRSA CLRVVGS+ H G
Sbjct: 319 TLSKAINQIQKTRKAISNSQRKPPDDNEIAKLTGLSLDKIRSAGNCLRVVGSIDHKIGDC 378
Query: 879 FSG 871
FSG
Sbjct: 379 FSG 381
>ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC [Eucalyptus grandis]
gi|629114510|gb|KCW79185.1| hypothetical protein
EUGRSUZ_C00620 [Eucalyptus grandis]
Length = 556
Score = 78.2 bits (191), Expect = 1e-11
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -1
Query: 1062 STFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGG 883
+T + A+NQIQKA KS+N + KYPDD EIAKL G S+AK+RSASQCLRVVGS+ G
Sbjct: 397 TTLATAVNQIQKAQKSLNNHRRKYPDDMEIAKLTGFSVAKVRSASQCLRVVGSIDQKIGD 456
Query: 882 LFSGNYI 862
+ Y+
Sbjct: 457 CINAKYM 463
Score = 52.8 bits (125), Expect(2) = 3e-06
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = -3
Query: 508 VPVLHYGFKNCQPKSLEEIRRLLRVNEERIRIMENKALKKLSDEEIGRNLSQY 350
V +L YG K+ Q KSLEEI RL V++E IR +E KA++KL D+++ +LS Y
Sbjct: 501 VLILRYGLKDNQVKSLEEIGRLFNVSKEWIRRIERKAMEKLRDKDVYSSLSHY 553
Score = 27.3 bits (59), Expect(2) = 3e-06
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 588 KFNPNTSIMSPAETVTRQDMRKGI 517
+F P+ S+ SP ETV RQ+M I
Sbjct: 464 EFTPDRSLRSPEETVLRQNMSSQI 487
>gb|KCW79184.1| hypothetical protein EUGRSUZ_C00620 [Eucalyptus grandis]
Length = 501
Score = 78.2 bits (191), Expect = 1e-11
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -1
Query: 1062 STFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGG 883
+T + A+NQIQKA KS+N + KYPDD EIAKL G S+AK+RSASQCLRVVGS+ G
Sbjct: 397 TTLATAVNQIQKAQKSLNNHRRKYPDDMEIAKLTGFSVAKVRSASQCLRVVGSIDQKIGD 456
Query: 882 LFSGNYI 862
+ Y+
Sbjct: 457 CINAKYM 463
>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
Length = 606
Score = 77.8 bits (190), Expect = 1e-11
Identities = 37/69 (53%), Positives = 52/69 (75%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+NQIQKA K+++ + KYPDD++IA+ GLSLAKI SAS+CLRVVGS+ G
Sbjct: 448 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRVVGSIDQKMGDC 507
Query: 879 FSGNYIVWL 853
F+ Y+ ++
Sbjct: 508 FNAKYLEFI 516
>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
Length = 564
Score = 77.8 bits (190), Expect = 1e-11
Identities = 37/69 (53%), Positives = 52/69 (75%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+NQIQKA K+++ + KYPDD++IA+ GLSLAKI SAS+CLRVVGS+ G
Sbjct: 406 TLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRVVGSIDQKMGDC 465
Query: 879 FSGNYIVWL 853
F+ Y+ ++
Sbjct: 466 FNAKYLEFI 474
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 77.8 bits (190), Expect = 1e-11
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+ QIQKA K++ T+ KYPDDDEIAK GLSLAKI SAS+CLRVVGS+ G
Sbjct: 402 TLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGES 461
Query: 879 FSGNYIVWL 853
+ Y+ +L
Sbjct: 462 LNAKYLEFL 470
>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
Length = 553
Score = 76.6 bits (187), Expect = 3e-11
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T SKA+NQIQKA K+ + KYPDD+EIAK+ GLSLA+IRSAS CLRVVGSV H
Sbjct: 395 TLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWES 454
Query: 879 FSGNYI 862
G Y+
Sbjct: 455 SDGTYM 460
>ref|XP_008220143.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
Length = 175
Score = 76.6 bits (187), Expect = 3e-11
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T SKA+NQIQKA K+ + KYPDD+EIAK+ GLSLA+IRSAS CLRVVGSV H
Sbjct: 17 TLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWES 76
Query: 879 FSGNYI 862
G Y+
Sbjct: 77 SDGTYM 82
>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
gi|462419859|gb|EMJ24122.1| hypothetical protein
PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 76.6 bits (187), Expect = 3e-11
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T SKA+NQIQKA K+ + KYPDD+EIAK+ GLSLA+IRSAS CLRVVGSV H
Sbjct: 397 TLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWES 456
Query: 879 FSGNYI 862
G Y+
Sbjct: 457 SDGTYM 462
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC [Fragaria vesca subsp.
vesca]
Length = 545
Score = 75.9 bits (185), Expect = 5e-11
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = -1
Query: 1062 STFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGG 883
+T SKA+N+IQKA K+ + KYPDD+EIAK+ GLSLAKI SAS+CLRVVGSV H
Sbjct: 385 NTLSKAINRIQKARKANYNSHMKYPDDEEIAKITGLSLAKISSASRCLRVVGSVDHKIWE 444
Query: 882 LFSGNYI 862
+G Y+
Sbjct: 445 CSAGTYM 451
>ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
indicum]
Length = 388
Score = 74.7 bits (182), Expect = 1e-10
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T SK +NQ+Q+A K+++T+ KYPDD +IAK GLS+AKI SAS+CLRVVGS+ G
Sbjct: 229 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEA 288
Query: 879 FSGNYI 862
S Y+
Sbjct: 289 ISAKYM 294
>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
indicum]
Length = 556
Score = 74.7 bits (182), Expect = 1e-10
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T SK +NQ+Q+A K+++T+ KYPDD +IAK GLS+AKI SAS+CLRVVGS+ G
Sbjct: 397 TLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEA 456
Query: 879 FSGNYI 862
S Y+
Sbjct: 457 ISAKYM 462
>ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-like [Malus domestica]
Length = 559
Score = 74.7 bits (182), Expect = 1e-10
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSV 901
T SKA+NQIQKA K+ + KYPDDDEIAK+ GLSLA+I+SAS CLRVVGS+
Sbjct: 400 TLSKAINQIQKARKATYNSQMKYPDDDEIAKITGLSLARIKSASTCLRVVGSI 452
>ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-like [Pyrus x
bretschneideri]
Length = 556
Score = 73.2 bits (178), Expect = 3e-10
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSV 901
T SKA+NQIQKA K+ + +YPDDDEIAK+ GLSL +IRSAS CLRVVGSV
Sbjct: 398 TLSKAINQIQKARKATYNSHMRYPDDDEIAKITGLSLVRIRSASTCLRVVGSV 450
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 72.0 bits (175), Expect = 8e-10
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+ QIQKA K+++ + KYPD+D IAK GLSLAKIRSA++C+RVVGS+ G
Sbjct: 690 TLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDC 749
Query: 879 FSGNYIVWL 853
+ Y+ ++
Sbjct: 750 MNAKYLEFI 758
Score = 63.5 bits (153), Expect = 3e-07
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -3
Query: 508 VPVLHYGFKNCQPKSLEEIRRLLRVNEERIRIMENKALKKLSDEEIGRNLSQYLES 341
V VL YG K PKSLEEI RL V++E IR +E KA+KKL D+E RNLS YL+S
Sbjct: 793 VMVLRYGLKGSPPKSLEEIGRLFHVSKEWIRRIEMKAMKKLRDKETCRNLSHYLDS 848
>ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X6
[Gossypium raimondii]
Length = 471
Score = 71.6 bits (174), Expect = 1e-09
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+ QIQKA K+++ + KYP++DEIAK+ GLSL+KIRSA++C RVVGS+ G
Sbjct: 313 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDC 372
Query: 879 FSGNYIVWL 853
+ Y+ ++
Sbjct: 373 INAKYLEFI 381
Score = 60.8 bits (146), Expect = 2e-06
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -3
Query: 508 VPVLHYGFKNCQPKSLEEIRRLLRVNEERIRIMENKALKKLSDEEIGRNLSQYLES 341
V VL YG PKSLEEI RL RV++E IR +E KA+ KL D+E RNLS YL+S
Sbjct: 416 VMVLRYGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLDS 471
>ref|XP_012450466.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X5
[Gossypium raimondii]
Length = 547
Score = 71.6 bits (174), Expect = 1e-09
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+ QIQKA K+++ + KYP++DEIAK+ GLSL+KIRSA++C RVVGS+ G
Sbjct: 389 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDC 448
Query: 879 FSGNYIVWL 853
+ Y+ ++
Sbjct: 449 INAKYLEFI 457
Score = 60.8 bits (146), Expect = 2e-06
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -3
Query: 508 VPVLHYGFKNCQPKSLEEIRRLLRVNEERIRIMENKALKKLSDEEIGRNLSQYLES 341
V VL YG PKSLEEI RL RV++E IR +E KA+ KL D+E RNLS YL+S
Sbjct: 492 VMVLRYGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLDS 547
>ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
[Gossypium raimondii]
Length = 576
Score = 71.6 bits (174), Expect = 1e-09
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+ QIQKA K+++ + KYP++DEIAK+ GLSL+KIRSA++C RVVGS+ G
Sbjct: 418 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDC 477
Query: 879 FSGNYIVWL 853
+ Y+ ++
Sbjct: 478 INAKYLEFI 486
Score = 60.8 bits (146), Expect = 2e-06
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -3
Query: 508 VPVLHYGFKNCQPKSLEEIRRLLRVNEERIRIMENKALKKLSDEEIGRNLSQYLES 341
V VL YG PKSLEEI RL RV++E IR +E KA+ KL D+E RNLS YL+S
Sbjct: 521 VMVLRYGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLDS 576
>ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
[Gossypium raimondii]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+ QIQKA K+++ + KYP++DEIAK+ GLSL+KIRSA++C RVVGS+ G
Sbjct: 419 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDC 478
Query: 879 FSGNYIVWL 853
+ Y+ ++
Sbjct: 479 INAKYLEFI 487
Score = 60.8 bits (146), Expect = 2e-06
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -3
Query: 508 VPVLHYGFKNCQPKSLEEIRRLLRVNEERIRIMENKALKKLSDEEIGRNLSQYLES 341
V VL YG PKSLEEI RL RV++E IR +E KA+ KL D+E RNLS YL+S
Sbjct: 522 VMVLRYGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLDS 577
>gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium raimondii]
Length = 458
Score = 71.6 bits (174), Expect = 1e-09
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = -1
Query: 1059 TFSKALNQIQKA*KSINTNLSKYPDDDEIAKLIGLSLAKIRSASQCLRVVGSVGH*TGGL 880
T S+A+ QIQKA K+++ + KYP++DEIAK+ GLSL+KIRSA++C RVVGS+ G
Sbjct: 300 TLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDC 359
Query: 879 FSGNYIVWL 853
+ Y+ ++
Sbjct: 360 INAKYLEFI 368
Score = 60.8 bits (146), Expect = 2e-06
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -3
Query: 508 VPVLHYGFKNCQPKSLEEIRRLLRVNEERIRIMENKALKKLSDEEIGRNLSQYLES 341
V VL YG PKSLEEI RL RV++E IR +E KA+ KL D+E RNLS YL+S
Sbjct: 403 VMVLRYGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKETCRNLSHYLDS 458