BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00006423
         (2036 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010095379.1| CRS2-associated factor 1 [Morus notabilis] g...   755   0.0  
ref|XP_008242551.1| PREDICTED: CRS2-associated factor 1, chlorop...   754   0.0  
ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prun...   754   0.0  
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   727   0.0  
ref|XP_009352524.1| PREDICTED: CRS2-associated factor 1, chlorop...   718   0.0  
ref|XP_008337503.1| PREDICTED: CRS2-associated factor 1, chlorop...   708   0.0  
ref|XP_010060935.1| PREDICTED: CRS2-associated factor 1, chlorop...   707   0.0  
ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing pr...   693   0.0  
ref|XP_008458627.1| PREDICTED: CRS2-associated factor 1, chlorop...   692   0.0  
ref|XP_008387155.1| PREDICTED: CRS2-associated factor 1, chlorop...   692   0.0  
gb|KDO66499.1| hypothetical protein CISIN_1g003220mg [Citrus sin...   686   0.0  
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              685   0.0  
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   685   0.0  
ref|XP_010263189.1| PREDICTED: CRS2-associated factor 1, chlorop...   684   0.0  
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   684   0.0  
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   684   0.0  
gb|KJB64997.1| hypothetical protein B456_010G075200 [Gossypium r...   682   0.0  
ref|XP_012449395.1| PREDICTED: CRS2-associated factor 1, chlorop...   682   0.0  
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   682   0.0  
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   676   0.0  

>ref|XP_010095379.1| CRS2-associated factor 1 [Morus notabilis]
            gi|587870515|gb|EXB59798.1| CRS2-associated factor 1
            [Morus notabilis]
          Length = 792

 Score =  755 bits (1949), Expect = 0.0
 Identities = 398/614 (64%), Positives = 449/614 (73%), Gaps = 2/614 (0%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK PIPFPIF                 +HR P E+RFSRWNNANAEKFNERRR  Q  
Sbjct: 1    MALKLPIPFPIFAPHLNPSPP-------QYHRLPTELRFSRWNNANAEKFNERRRTLQQI 53

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA RI                   G+ FKSIGTPS PSRPSIPGKKSKY
Sbjct: 54   EDDIRRQRRFDSATRISDIPDSASPSTAGSA---TGEFFKSIGTPSSPSRPSIPGKKSKY 110

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMK-ISNLPRENNPPINRQANVSVGEDGLSYVIDG 1305
                               RR  K ++K +S LP++    + R+A+V VGEDG+SYVIDG
Sbjct: 111  SKNPNPSFDSRSHPAFRPLRRVRKIAVKELSGLPKDKRD-VERKADVRVGEDGVSYVIDG 169

Query: 1304 SPFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPP 1125
            +PFEFKYSYTETPKA+P+KLRE PYAPFGPTTMPRPWTGRAPLPPSKKK++EFDSFRL P
Sbjct: 170  APFEFKYSYTETPKAQPVKLREAPYAPFGPTTMPRPWTGRAPLPPSKKKLKEFDSFRLSP 229

Query: 1124 PHKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDG 945
            PHKKGVKPVQAPGPFLPGSGPKYVMSREEILG PLTEEEIKDLI GC K+KRQ+NMGRDG
Sbjct: 230  PHKKGVKPVQAPGPFLPGSGPKYVMSREEILGEPLTEEEIKDLIEGCRKTKRQMNMGRDG 289

Query: 944  LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGR 765
            LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV++QLEERTGGKIIY KGGVI+LFRGR
Sbjct: 290  LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKEQLEERTGGKIIYGKGGVIFLFRGR 349

Query: 764  NYNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVY 585
            NYNY+TRPRFPLMLWKPVTP+YPRLV+RVPEGLTLEEA EMRKKG  L+PICKLGKNGVY
Sbjct: 350  NYNYRTRPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEAKEMRKKGHKLMPICKLGKNGVY 409

Query: 584  IDLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDW 405
             +LVK+VREAFEECE+VRINCQGMN SDYRKIGAKLKDL+PCVL+SF  EHIL+WRG DW
Sbjct: 410  HNLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLLSFAFEHILIWRGCDW 469

Query: 404  KSSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPSTT-TP 228
            KSSLPKL KD  E  A +S V    SV+PS+EG+E + S+     VN+ S E+ STT T 
Sbjct: 470  KSSLPKLVKDRDE--AKESDVQIVTSVAPSVEGEEVAMSTGS---VNDASLELISTTSTL 524

Query: 227  HXXXXXXXXXXXXXXSIIECVDPLAATDAVSTAGMTYGAKNVPNVQSPADDVLEAIRNAG 48
            +              S +E V+P + T  VS    T+  + + +VQ P DD L    N  
Sbjct: 525  NRSHEVIGTEGREDSSSVEYVEPCSTTGDVSNEIKTFATEKISDVQIPVDDRLGDTSNTS 584

Query: 47   YSAAGRSDDPGYAG 6
            Y+    S++ G  G
Sbjct: 585  YNGT-TSENSGSNG 597


>ref|XP_008242551.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Prunus mume]
          Length = 748

 Score =  754 bits (1948), Expect = 0.0
 Identities = 382/594 (64%), Positives = 443/594 (74%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MAL  P   PIF                + +RPP EVRF+RWNNANAEKFN+RRRAQQ  
Sbjct: 1    MALNLPTSCPIFAPLLNLNPNHNP----TPNRPPTEVRFARWNNANAEKFNQRRRAQQEI 56

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA RI                    +TFKSIGTPS PS PSIPGKKSKY
Sbjct: 57   EDDIRRQRRFDSATRIATIYDSATDTTT------TSETFKSIGTPSFPSSPSIPGKKSKY 110

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFRR  + + K+S +P++  P ++R+AN+SVG+DGLSYVIDG+
Sbjct: 111  SKNPNPNESHP------AFRRIIRPT-KLSKIPKDKGPTVDRKANISVGDDGLSYVIDGA 163

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETP+ KP+KLREP YAPFGPTTM RPWTGRAPLPPSKKK++EFDSF+LPPP
Sbjct: 164  PFEFKYSYTETPRVKPLKLREPAYAPFGPTTMARPWTGRAPLPPSKKKLKEFDSFQLPPP 223

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            HKKGVKPVQ+PGP+LPGSGPKYV SR+EILG PLT EE+K+L+ GCIK++RQLNMGRDG 
Sbjct: 224  HKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKELVKGCIKTRRQLNMGRDGF 283

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV +Q+EE+TGGKIIY KGGVIYLFRGRN
Sbjct: 284  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGKIIYRKGGVIYLFRGRN 343

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRP+FPLMLW+P+TP+YPRLVQR PEGLTLEEATEMRKKGR+LIPICKLGKNGVY 
Sbjct: 344  YNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRKKGRNLIPICKLGKNGVYS 403

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            +L KNVREAFEECE+VRINC GMN SDYRKIGAKLKDL+PCVLISFE EHILMWRG++WK
Sbjct: 404  ELAKNVREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCVLISFELEHILMWRGREWK 463

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPSTTTPHX 222
            SSLP  + D +EV  SD  VD++ S++P LEGQEES S    V V + S E+ +T+TP  
Sbjct: 464  SSLPNPENDLKEVKGSD--VDDSTSIAPPLEGQEESTSCASTVSVKDASLEILNTSTPSI 521

Query: 221  XXXXXXXXXXXXXSIIECVDPLAATDAVSTAGMTYGAKNVPNVQSPADDVLEAI 60
                         S  + V+P A  D VS  G T+  + + +V+   DD  +AI
Sbjct: 522  GSEVVGAEGSGDLSPSQYVEPCATVDRVSAVGGTHVTETISDVE---DDESKAI 572


>ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
            gi|462399316|gb|EMJ04984.1| hypothetical protein
            PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  754 bits (1946), Expect = 0.0
 Identities = 381/594 (64%), Positives = 442/594 (74%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MAL  P   PIF                + +RPP EVRF+RWNNANAEKFNERRRAQQ  
Sbjct: 1    MALNLPTSCPIFAPLLNLNPNHNP----TPNRPPTEVRFARWNNANAEKFNERRRAQQEI 56

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA RI                    +TFKS+GTPS PS PSIPGKKSKY
Sbjct: 57   EDDIRRERRFDSATRIATIYDSATDTTT------TSETFKSVGTPSFPSSPSIPGKKSKY 110

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFRR  + + K+S +P++  P ++R+AN+SVG+DGLSYVIDG+
Sbjct: 111  SKNPNPKESHP------AFRRIIRPT-KLSKIPKDKGPTVDRKANISVGDDGLSYVIDGA 163

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETPK KP+KLREP YAPFGPTTM RPWTGRAPLPPSKKK++EFDSF+LPPP
Sbjct: 164  PFEFKYSYTETPKVKPLKLREPAYAPFGPTTMARPWTGRAPLPPSKKKLKEFDSFQLPPP 223

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            HKKGVKPVQ+PGP+LPGSGPKYV SR+EILG PLT EE+K+L+ GCIK++RQLNMGRDG 
Sbjct: 224  HKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKELVKGCIKTRRQLNMGRDGF 283

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV +Q+EE+TGGKIIY KGGVIYLFRGRN
Sbjct: 284  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGKIIYRKGGVIYLFRGRN 343

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRP+FPLMLW+P+TP+YPRLVQR PEGLTLEEATEMRKKGR+LIPICKLGKNGVY 
Sbjct: 344  YNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRKKGRNLIPICKLGKNGVYS 403

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            +L KN REAFEECE+VRINC GMN SDYRKIGAKLKDL+PCVLISFE EHILMWRG++WK
Sbjct: 404  ELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCVLISFELEHILMWRGREWK 463

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPSTTTPHX 222
            SS+P  + D +EV  SD  VD++ S++P LEGQEES S    V V + S E+ +T+TP  
Sbjct: 464  SSIPYPENDLKEVKGSD--VDDSTSIAPPLEGQEESTSCASTVSVKDASLEILNTSTPSI 521

Query: 221  XXXXXXXXXXXXXSIIECVDPLAATDAVSTAGMTYGAKNVPNVQSPADDVLEAI 60
                         S  + V+P A  D VS  G T+  + + +V+   DD  +AI
Sbjct: 522  GSEVVGAEESGDLSPSQYVEPCATVDGVSAVGGTHVTETISDVE---DDESKAI 572


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Fragaria vesca
            subsp. vesca]
          Length = 804

 Score =  727 bits (1876), Expect = 0.0
 Identities = 380/613 (61%), Positives = 440/613 (71%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MAL  P   PIF                 H RPP EVRF+RWNNANAEKFN+RRRAQQ  
Sbjct: 1    MALNLPTSCPIFAPPVNPNPAHNPI----HTRPPTEVRFARWNNANAEKFNQRRRAQQEI 56

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA RI                      FKSIGTPS PSRPSIPGKKSKY
Sbjct: 57   EDDFRRERRFDSATRIATVSVAGSSTSDAET------AFKSIGTPSSPSRPSIPGKKSKY 110

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFRR  K + K+S++ RE  P ++R+AN+S+G+DGLSYVIDG+
Sbjct: 111  SENPNPNPSSHP-----AFRRVIKPT-KLSSITREK-PEVDRKANISIGDDGLSYVIDGA 163

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETPK KPIKLREPPYAPFGPTTM RPWTGRAPLP SKKKM+EFDSF+LPPP
Sbjct: 164  PFEFKYSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGRAPLPASKKKMKEFDSFQLPPP 223

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            HKKGV+PVQ+PGP+LPGSGPKYV SREEILG PLT++E+KDL+NGCIK++RQLNMGRDGL
Sbjct: 224  HKKGVRPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEVKDLVNGCIKTRRQLNMGRDGL 283

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDM+NV QQLEERTGGKIIY +GGVI+LFRGRN
Sbjct: 284  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEERTGGKIIYRRGGVIFLFRGRN 343

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRPRFPLMLW+P+TP+YPRL+QR PEGLT+EEATEMRKKGR LIPI KLGKNGVY 
Sbjct: 344  YNYKTRPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATEMRKKGRDLIPIRKLGKNGVYS 403

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DLV NVREAFEECE+VRI+CQGMN SDYRKIGAKLKDL+PCVLISFERE ILMWRG++WK
Sbjct: 404  DLVDNVREAFEECELVRIDCQGMNGSDYRKIGAKLKDLVPCVLISFERESILMWRGREWK 463

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPSTTTPHX 222
            SSL   + + +EV   +S VD++ S++ SLEG++ S        V + + E+  T+    
Sbjct: 464  SSLVNPESNLKEV--KESNVDDSPSIALSLEGEDASTVCAFTGSVKDANPEMIDTSISSS 521

Query: 221  XXXXXXXXXXXXXSIIECVDPLAATDAVSTAGMTYGAKNVPNVQSPADDVLEAIRNAGYS 42
                         S    ++P A  D VS  G T     + +++   DD  E +    YS
Sbjct: 522  IAEVVGAEGTEDPSPSPYIEPPAIIDTVSDVGSTCETVTISDIKGFRDDEAE-LNMKAYS 580

Query: 41   AAGRSDDPGYAGD 3
            +    +D  YA D
Sbjct: 581  SLVIPEDTSYADD 593


>ref|XP_009352524.1| PREDICTED: CRS2-associated factor 1, chloroplastic isoform X1 [Pyrus
            x bretschneideri] gi|694322847|ref|XP_009352526.1|
            PREDICTED: CRS2-associated factor 1, chloroplastic
            isoform X2 [Pyrus x bretschneideri]
          Length = 773

 Score =  718 bits (1853), Expect = 0.0
 Identities = 376/615 (61%), Positives = 438/615 (71%), Gaps = 2/615 (0%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MAL  P   PIF                + HRPP EVRF+RWNNANAEKFN+RRRAQQ  
Sbjct: 1    MALNLPTSCPIFAPLLNPSPTNNP----NQHRPPTEVRFARWNNANAEKFNQRRRAQQEI 56

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXS-NGQTFKSIGTPSLPSRPSIPGKKSK 1485
                    RF+SA RI                 + + +T+KSIGTPS PS PSI GKKSK
Sbjct: 57   QDDIRRERRFESATRIATLSDSTTDTTTAAANATTSSETYKSIGTPSYPSSPSIQGKKSK 116

Query: 1484 YXXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDG 1305
            Y                 AFRR  + + K+S +PRE  P ++R+A++S+G+DGLSYVIDG
Sbjct: 117  YSKNPNPTDSHP------AFRRIIRPT-KLSKIPREKKPAVDRKADISIGDDGLSYVIDG 169

Query: 1304 SPFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPP 1125
            +PFEFKYSYTETPK KPIKLREPP+APFGPTTM RPWTGRAPLP SKKK++EFDSF+LPP
Sbjct: 170  APFEFKYSYTETPKIKPIKLREPPFAPFGPTTMDRPWTGRAPLPASKKKLKEFDSFQLPP 229

Query: 1124 PHKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDG 945
            PHKKGVKPVQ+PGP+LPGSGPKYV SREEILG PLT EE+K+L+ GCIK+KRQLNMGRDG
Sbjct: 230  PHKKGVKPVQSPGPYLPGSGPKYVKSREEILGDPLTVEEVKELVKGCIKTKRQLNMGRDG 289

Query: 944  LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGR 765
            LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDM+NV +QLEERTGGKIIY KGGVIYLFRGR
Sbjct: 290  LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVSEQLEERTGGKIIYRKGGVIYLFRGR 349

Query: 764  NYNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVY 585
            NYNYKTRP+FPLMLW+P+TP+YPRL+QR PEGLT+EEA+EMRKKGR+LIPICKLGKNGVY
Sbjct: 350  NYNYKTRPKFPLMLWRPITPVYPRLIQRAPEGLTVEEASEMRKKGRNLIPICKLGKNGVY 409

Query: 584  IDLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDW 405
             +LVKNVREAFEECE+VRINCQGMN SDYRKIG KLKDL+PCVL+SFE EHIL+WRG +W
Sbjct: 410  SELVKNVREAFEECELVRINCQGMNASDYRKIGGKLKDLVPCVLLSFELEHILLWRGWEW 469

Query: 404  KSSLPKLDKDCREVMASD-SGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPSTTTP 228
            KSSLP  + D +EV  SD +G  + AS S + E            +V  E S+  S +  
Sbjct: 470  KSSLPNPENDLKEVKESDVNGSTSFASTSCASE------------VVGAEGSKDLSPS-- 515

Query: 227  HXXXXXXXXXXXXXXSIIECVDPLAATDAVSTAGMTYGAKNVPNVQSPADDVLEAIRNAG 48
                              + V P A  D VST G T   + + +V+    +  EA  NA 
Sbjct: 516  ------------------QYVGPHATVDGVSTVGGTCETEPISDVEGYVSNESEAKMNAD 557

Query: 47   YSAAGRSDDPGYAGD 3
             S+    D+  YA D
Sbjct: 558  NSST-IPDNIHYAAD 571


>ref|XP_008337503.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Malus
            domestica]
          Length = 772

 Score =  708 bits (1828), Expect = 0.0
 Identities = 372/613 (60%), Positives = 435/613 (70%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MAL  P   PIF                + HRPP EVRF+RWNNANAEKFN+RR AQQ  
Sbjct: 1    MALNLPTSCPIFAPLLNPSPTHNNP---NQHRPPTEVRFARWNNANAEKFNQRRXAQQEI 57

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RF+SA RI                  + +T+KSIGTPS PS PSIPGKKSKY
Sbjct: 58   EDDIRRERRFESATRIATLSDSATDTAAANAXT-SSETYKSIGTPSYPSSPSIPGKKSKY 116

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFRR  + + K+S +PRE  P ++R+A++S+G+DGLSYVIDG+
Sbjct: 117  XKNPNPTDSHP------AFRRXIRPT-KLSKIPREKKPAVDRKADISIGDDGLSYVIDGA 169

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETPK  PIKLREPP+ PFGPTTM RPWTGRAPLP SKKK++EFDSF+LPPP
Sbjct: 170  PFEFKYSYTETPKIXPIKLREPPFXPFGPTTMDRPWTGRAPLPASKKKLKEFDSFQLPPP 229

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            HKKGVKPVQ+PGP+LPGSGPKYV SREEILG PLT EE+K+L+ GCIK+KRQLNMGRDGL
Sbjct: 230  HKKGVKPVQSPGPYLPGSGPKYVKSREEILGDPLTVEEVKELVKGCIKTKRQLNMGRDGL 289

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDM+NV +QLEERTGGKIIY KGGVIYLFRGRN
Sbjct: 290  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCEQLEERTGGKIIYRKGGVIYLFRGRN 349

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRP+FPLMLW+P+TP+YPRL+Q  PEGLT+E A+EMRKKGR+LIPICKLGKNGVY 
Sbjct: 350  YNYKTRPKFPLMLWRPITPVYPRLIQXAPEGLTVEAASEMRKKGRNLIPICKLGKNGVYS 409

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            +LV NVREAFEECE+VRINCQGMN SDYRKIG KLKDL+PCVL+SFE EHIL+WRG++WK
Sbjct: 410  ELVXNVREAFEECELVRINCQGMNASDYRKIGGKLKDLVPCVLMSFELEHILLWRGREWK 469

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPSTTTPHX 222
            SSLP  + D +EV  SD  VD + S++ +    E         +V  E SE  S +    
Sbjct: 470  SSLPNPENDLKEVKESD--VDCSTSIASTSCASE---------VVGAEGSEDLSPS---- 514

Query: 221  XXXXXXXXXXXXXSIIECVDPLAATDAVSTAGMTYGAKNVPNVQSPADDVLEAIRNAGYS 42
                            + V P A  D VST G T   + + +V+   ++  EA   A  S
Sbjct: 515  ----------------QYVGPRATVDGVSTVGGTSETEPISDVEGYINNESEAKMTADNS 558

Query: 41   AAGRSDDPGYAGD 3
            +    D+  YA D
Sbjct: 559  ST-IPDNIHYAAD 570


>ref|XP_010060935.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Eucalyptus
            grandis]
          Length = 800

 Score =  707 bits (1824), Expect = 0.0
 Identities = 375/616 (60%), Positives = 424/616 (68%), Gaps = 9/616 (1%)
 Frame = -1

Query: 1886 LASSTLQFAEPVPEKMALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPG-----EVRFS 1722
            L  S L    P  E+MALK+ +PFPIF                + HRPP      +VRFS
Sbjct: 64   LGPSELSAPGPSREEMALKFALPFPIFAPPSPLNPGPAPGPNAAPHRPPPTLTPTQVRFS 123

Query: 1721 RWNNANAEKFNERRRAQQXXXXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFK 1542
            RWNN NAE+FNERRRAQQ          RF+SA RI                  + +TF 
Sbjct: 124  RWNNTNAERFNERRRAQQEIEDDIRRERRFNSATRISQVDDPAAVGGDAAVSG-SPETFH 182

Query: 1541 SIGTPSLPSRPSIPGKKSKYXXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPI 1362
            S GTPS PS  SIPGKKSKY                 AFRR  +              P+
Sbjct: 183  SRGTPSSPSTSSIPGKKSKYSKDRHP-----------AFRRISQIRRTQEEKIDARGDPM 231

Query: 1361 NRQANVSVGEDGLSYVIDGSPFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRA 1182
            +R+ANV + EDGLSYVIDG+PFEFKYSYTETPK KP+KLRE PYAPFGPTTM RPWTGRA
Sbjct: 232  DRKANVVLSEDGLSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPTTMSRPWTGRA 291

Query: 1181 PLPPSKKKMREFDSFRLPPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIK 1002
            PLPP KKK++EFDSFRLPPP KKGVKPVQ+PGPFLPG GP+YV +REEILG PLTEEE++
Sbjct: 292  PLPPCKKKLKEFDSFRLPPPGKKGVKPVQSPGPFLPGRGPRYVKTREEILGEPLTEEEVR 351

Query: 1001 DLINGCIKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEER 822
            DL+NGC+KSKRQ+NMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV+QQLEER
Sbjct: 352  DLVNGCLKSKRQMNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLEER 411

Query: 821  TGGKIIYSKGGVIYLFRGRNYNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEM 642
            TGGKIIYSKGGV+YLFRGRNYNY+TRPRFPLMLWKP+TP+YPRL++RVPEGLTLE+ATEM
Sbjct: 412  TGGKIIYSKGGVLYLFRGRNYNYRTRPRFPLMLWKPITPVYPRLIKRVPEGLTLEKATEM 471

Query: 641  RKKGRSLIPICKLGKNGVYIDLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIP 462
            RKKGR+L PICKLGKNGVY DLV+NVREAFEECE+VRINC+GMN SDYRKIGAKLKDL+P
Sbjct: 472  RKKGRALAPICKLGKNGVYCDLVQNVREAFEECELVRINCKGMNGSDYRKIGAKLKDLVP 531

Query: 461  CVLISFEREHILMWRGKDWKSSLPKLDKDCREVMASD--SGVDNAASVSPSLEGQEESPS 288
            CVLISFE EHILMWRG++WKSS P       EV   D  S VD A   SP          
Sbjct: 532  CVLISFEDEHILMWRGREWKSSFP-----TPEVYYKDYPSSVDRAREGSPL--------- 577

Query: 287  SDPVVLVNNESSEVPSTTTPHXXXXXXXXXXXXXXSIIECVD--PLAATDAVSTAGMTYG 114
              PV+   +E  EVP  T P               SI+  VD   +      S A  + G
Sbjct: 578  --PVISEQDEKQEVPGKTGPPFVQENEVYGVTDEDSILGEVDGNKITVGGESSEADESEG 635

Query: 113  AKNVPNVQSPADDVLE 66
            AK++    +  D V E
Sbjct: 636  AKSIDAAVAMPDVVAE 651


>ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao] gi|508783438|gb|EOY30694.1| RNA-binding
            CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  693 bits (1789), Expect = 0.0
 Identities = 346/522 (66%), Positives = 396/522 (75%), Gaps = 5/522 (0%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK PI FPIF                  HRPP E+RFSRWNNANAEKFN+R+RAQQ  
Sbjct: 1    MALKLPISFPIFAPPLPNPYPNPNEPA---HRPPTEIRFSRWNNANAEKFNQRQRAQQEI 57

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA +I                    +T+KS+G+PS PS PSIPGKKSKY
Sbjct: 58   EDDIRRYRRFDSATKIAITIDPSSASPRPT------ETYKSLGSPSSPSNPSIPGKKSKY 111

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+F KT+      P +  P     ANVS+G+DG+S+VIDG+
Sbjct: 112  SKPPNHP----------AFRKFSKTANPPPPTPLDKKP-----ANVSIGDDGISFVIDGA 156

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETPK KPIKLREPPY+PFGP+TMPRPWTGRAPLPPSKKKM+EFDSF LPPP
Sbjct: 157  PFEFKYSYTETPKVKPIKLREPPYSPFGPSTMPRPWTGRAPLPPSKKKMKEFDSFVLPPP 216

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            +KKGVKP+Q PGP+LPG+GP+YV SREEILG PL  EE+K+L+NGC+KSKRQLNMGRDGL
Sbjct: 217  NKKGVKPIQKPGPYLPGTGPRYVQSREEILGEPLNAEEVKELVNGCLKSKRQLNMGRDGL 276

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV +QLEERTGGK+IY +GGV++LFRGRN
Sbjct: 277  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQLEERTGGKVIYRRGGVLFLFRGRN 336

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRPRFPLMLWKPVTP+YPRL+Q+ PEGLT+EE +EMRKKGR L+PICKL KNGVY 
Sbjct: 337  YNYKTRPRFPLMLWKPVTPMYPRLIQKAPEGLTVEEMSEMRKKGRKLMPICKLAKNGVYS 396

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DLVKNVREAFEECE+VR+NC+G+  SDYRKIGAKLK+L+PCVLISFE E ILMWRG++WK
Sbjct: 397  DLVKNVREAFEECELVRVNCEGIKGSDYRKIGAKLKELVPCVLISFENESILMWRGRNWK 456

Query: 401  SSLPKLDKDCREVMASDSGV-----DNAASVSPSLEGQEESP 291
            SS  K         A +SGV     +NA S+   LEGQE SP
Sbjct: 457  SSFLK--------PAFNSGVEERDAENATSILGQLEGQELSP 490


>ref|XP_008458627.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Cucumis melo]
          Length = 738

 Score =  692 bits (1786), Expect = 0.0
 Identities = 348/511 (68%), Positives = 393/511 (76%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK P PFPIF                  HR   E+RFSRWNNANAEKF +RRR+QQ  
Sbjct: 1    MALKLPFPFPIFTPQFNPNSTPS-------HRTLTEIRFSRWNNANAEKFEQRRRSQQEI 53

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RF SA  I                    +TF+S+GTPS PSRPSIPG+KSKY
Sbjct: 54   EDEIRRERRFSSATNIVDLCDSDSPSSAIDRT----ETFRSVGTPSSPSRPSIPGRKSKY 109

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                              FR+  KT  K  N P+E +  I  +ANVS+ EDG+S+VIDG+
Sbjct: 110  SKNPNPGSPSP-------FRQVSKTK-KTMNAPKERH--IGVEANVSLSEDGVSFVIDGA 159

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETPK KPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKK+ EFDSF+LPP 
Sbjct: 160  PFEFKYSYTETPKLKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKLPEFDSFQLPPK 219

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            +KKGVKPVQAPGPFL GSGPKYVMSREEILG PLTEEEIK LI GCIKS RQLN+GRDGL
Sbjct: 220  NKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTEEEIKMLIRGCIKSNRQLNIGRDGL 279

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNML+NIHAHWKRRRVCKIKCKGVCTVDMDNV+QQLEE+TGGKIIYS+GG +YL+RGRN
Sbjct: 280  THNMLENIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRGRN 339

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRPRFPLMLWKP TP+YPRL++ +P+GLTLEEATEMR+KGR LIPICKLGKNGVY 
Sbjct: 340  YNYKTRPRFPLMLWKPATPVYPRLIKHIPDGLTLEEATEMRRKGRKLIPICKLGKNGVYS 399

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
             LVK+VREAFEECE+VRINCQGMN SD+RKIGAKLKDL+PCVLISFE EHIL+WRG+DWK
Sbjct: 400  TLVKHVREAFEECELVRINCQGMNGSDFRKIGAKLKDLVPCVLISFESEHILLWRGRDWK 459

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLE 309
            SSLP ++++     A   G++    V+PS+E
Sbjct: 460  SSLPYIERNPEGAKA--HGMNETTIVAPSIE 488


>ref|XP_008387155.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Malus
            domestica]
          Length = 777

 Score =  692 bits (1786), Expect = 0.0
 Identities = 346/508 (68%), Positives = 398/508 (78%), Gaps = 1/508 (0%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MAL  P   PIF                + +R P EV  +RWNNANAEKFN+RRRAQQ  
Sbjct: 1    MALNLPTSCPIFAPLLNPSPTHNA----AQNRXPTEVXXARWNNANAEKFNQRRRAQQEI 56

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXS-NGQTFKSIGTPSLPSRPSIPGKKSK 1485
                    RF+SA RI                 + + +TF SIGTPS PS PSIPGKKSK
Sbjct: 57   EDDIRRERRFESATRIATLSDSATDTTXAAANATTSSETFXSIGTPSYPSSPSIPGKKSK 116

Query: 1484 YXXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDG 1305
            Y                 AFRR  + + K+S + RE  P ++R+A++S+ +DGLSYVIDG
Sbjct: 117  YSKNPNPNDSHP------AFRRXIRPT-KVSKILREKKPAVDRKADISIRDDGLSYVIDG 169

Query: 1304 SPFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPP 1125
            +PFEFKYSYTETPK KPIKLREPP+ PFGPTTM RPWTGRAPLP SKKK++EFDSF+LPP
Sbjct: 170  APFEFKYSYTETPKIKPIKLREPPFXPFGPTTMDRPWTGRAPLPASKKKLKEFDSFQLPP 229

Query: 1124 PHKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDG 945
            PHKKGVKPVQ+PGP+L GSGPKYV SREEILG PLT EE+K+L+ GCIK+KRQLNMGRDG
Sbjct: 230  PHKKGVKPVQSPGPYLAGSGPKYVKSREEILGEPLTVEEVKELVKGCIKTKRQLNMGRDG 289

Query: 944  LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGR 765
            LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDM+NV +QLEERTGGKIIY KGGVIYLFRGR
Sbjct: 290  LTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCEQLEERTGGKIIYRKGGVIYLFRGR 349

Query: 764  NYNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVY 585
            NYNYKTRP+FPLMLW+P+TP+YPRLVQR PEGLT+EEA+EMRKKGR+LIPICKLGKNGVY
Sbjct: 350  NYNYKTRPKFPLMLWRPITPVYPRLVQRAPEGLTVEEASEMRKKGRNLIPICKLGKNGVY 409

Query: 584  IDLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDW 405
             +LVKNVREAFEECE+VRINCQGMN SDYRKIGAKLKDL+PCVL+SFE EHIL+WRG++W
Sbjct: 410  SELVKNVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLMSFELEHILLWRGREW 469

Query: 404  KSSLPKLDKDCREVMASDSGVDNAASVS 321
            KSSL   + D +EV  SD  VD++ S++
Sbjct: 470  KSSLLNPENDLKEVNGSD--VDDSTSIA 495


>gb|KDO66499.1| hypothetical protein CISIN_1g003220mg [Citrus sinensis]
          Length = 838

 Score =  686 bits (1769), Expect = 0.0
 Identities = 343/529 (64%), Positives = 396/529 (74%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK  IPFPIF                 +HRP  E+RFSRWNNANAE+FN+RRRAQQ  
Sbjct: 1    MALKLIIPFPIFSPPPNHNPNLNPNPP--NHRPATEIRFSRWNNANAEEFNQRRRAQQEI 58

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA +I                  NG  FKS GTPS PSRPSIPG+KSKY
Sbjct: 59   EDDIRRHRRFDSATKITQSYDSSTSTAT------NGVAFKSAGTPSSPSRPSIPGRKSKY 112

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+  K     +  P +   P   ++N+S+ EDGLSYVIDG+
Sbjct: 113  SKPATNSSVDHP-----AFRKISKREKTTNKSPEK---PAASKSNISITEDGLSYVIDGA 164

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTE PKAKP+KLRE  ++PFGPTTM RPWTGRAPLPPSKKK++EFDSF+LPPP
Sbjct: 165  PFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQLPPP 224

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            +KKGVKPVQ PGP+LPG+GP+YV +REEILG PLT +E+++L+    +S RQLNMGRDGL
Sbjct: 225  NKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTADEVRELVESAKRSSRQLNMGRDGL 284

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRR CKIKCKGVCTVDMDNV +QLEERTGGKIIY +GGV+YLFRGRN
Sbjct: 285  THNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRN 344

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNY++RPRFPLMLWKPVTP+YPRL+Q+VP+GLTLEEATEMRKKGR LIPICKLGKNGVY 
Sbjct: 345  YNYRSRPRFPLMLWKPVTPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYC 404

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DL KNVREAFE CE+VRINCQGMN SDYRKIGAKL+DL+PCVLISFEREHILMWRG++WK
Sbjct: 405  DLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWK 464

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNES 255
            SS+ K   D  +  A +S VD + SV+P   G   +PS   ++LV   S
Sbjct: 465  SSILKPGNDSED--AKESKVDGSISVAPPTAGNGSAPSLTQMLLVEGGS 511


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  685 bits (1768), Expect = 0.0
 Identities = 349/535 (65%), Positives = 389/535 (72%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK  IPFPI                   HRP  EVRFSRWNNANAE+F  R RAQ+  
Sbjct: 1    MALKTLIPFPILAPSNPS------------HRPASEVRFSRWNNANAERFTLRERAQKEI 48

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA RI                     TFKS GTPS PS+PSIPGK SKY
Sbjct: 49   EDNIRRERRFDSATRIADIDDAGTSKEAAAAG-----TFKSTGTPSSPSKPSIPGKSSKY 103

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+  + +     LP  N  P   +  +S+GEDG+SY++ G 
Sbjct: 104  SKNSKTSHP--------AFRQISRRT----KLPGPNISP-EAKRGISIGEDGVSYMVPGV 150

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFE +YSYTETPK KPI LREPP+ PFGP TMPRPWTGRAPLPPSKKK++EFDSF+LPPP
Sbjct: 151  PFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFDSFQLPPP 210

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
             KK VKPVQAPGPFLPGSGP+YV SREEILG PLTEEEIK+L+ GC+KSKRQLNMGRDGL
Sbjct: 211  GKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGL 270

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEE+TGGK+IY KGGV++LFRGRN
Sbjct: 271  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRN 330

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNY+ RPRFPLMLWKPVTP+YPRLVQR PEGLTLEEA  MRKKGR LIPICKL KNGVY 
Sbjct: 331  YNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYT 390

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DLV NVREAFEECE+VRINCQG+N SDYRKIGAKLKDL+PCVLISFE EHILMWRG DWK
Sbjct: 391  DLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWK 450

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPST 237
               PK +  C+E   SD+  ++ AS+ P  EGQE S S    + V + S ++  T
Sbjct: 451  FLHPKPEDGCKEAKESDN--NSEASIPPPFEGQELSASCSSKISVKDTSLDMLDT 503


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  685 bits (1768), Expect = 0.0
 Identities = 349/535 (65%), Positives = 389/535 (72%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK  IPFPI                   HRP  EVRFSRWNNANAE+F  R RAQ+  
Sbjct: 1    MALKTLIPFPILAPSNPS------------HRPASEVRFSRWNNANAERFTLRERAQKEI 48

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA RI                     TFKS GTPS PS+PSIPGK SKY
Sbjct: 49   EDNIRRERRFDSATRIADIDDAGTSKEAAAAG-----TFKSTGTPSSPSKPSIPGKSSKY 103

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+  + +     LP  N  P   +  +S+GEDG+SY++ G 
Sbjct: 104  SKNSKTSHP--------AFRQISRRT----KLPGPNISP-EAKRGISIGEDGVSYMVPGV 150

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFE +YSYTETPK KPI LREPP+ PFGP TMPRPWTGRAPLPPSKKK++EFDSF+LPPP
Sbjct: 151  PFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFDSFQLPPP 210

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
             KK VKPVQAPGPFLPGSGP+YV SREEILG PLTEEEIK+L+ GC+KSKRQLNMGRDGL
Sbjct: 211  GKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGL 270

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEE+TGGK+IY KGGV++LFRGRN
Sbjct: 271  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRN 330

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNY+ RPRFPLMLWKPVTP+YPRLVQR PEGLTLEEA  MRKKGR LIPICKL KNGVY 
Sbjct: 331  YNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYT 390

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DLV NVREAFEECE+VRINCQG+N SDYRKIGAKLKDL+PCVLISFE EHILMWRG DWK
Sbjct: 391  DLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWK 450

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPST 237
               PK +  C+E   SD+  ++ AS+ P  EGQE S S    + V + S ++  T
Sbjct: 451  FLHPKPEDGCKEAKESDN--NSEASIPPPFEGQELSASCSSKISVKDTSLDMLDT 503


>ref|XP_010263189.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Nelumbo nucifera]
          Length = 750

 Score =  684 bits (1765), Expect = 0.0
 Identities = 347/535 (64%), Positives = 393/535 (73%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            M+LK   PFPIF                  HRP  EVRFSRWNNANAE+F  R RAQ+  
Sbjct: 1    MSLKTTFPFPIFAPQVPS------------HRPATEVRFSRWNNANAERFLRRERAQKEI 48

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA+RI                 +  + FKSIGTPS PSR SIPGK SKY
Sbjct: 49   EDEIRRERRFDSASRIADDYDNEATNTSIIATTTGNENFKSIGTPSSPSRSSIPGKASKY 108

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFRR  K    +S LPR    P   +  V+VGE+G+SY    +
Sbjct: 109  SKNPNSDSKFSHP----AFRRVSK----VSRLPRV---PPETETGVTVGENGVSYTFPNA 157

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEF+YSYTETPK KP+ LREPP+ PFGP+TMPRPWTGR PLPPSKKK+ EFDSFRLPPP
Sbjct: 158  PFEFQYSYTETPKVKPLALREPPFVPFGPSTMPRPWTGRKPLPPSKKKLPEFDSFRLPPP 217

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            HKKGVKPVQ+PGPFL GSGPKYV SRE+ILG PLTEEEIKDL+ GC+KSKRQLNMGRDGL
Sbjct: 218  HKKGVKPVQSPGPFLAGSGPKYVRSREDILGEPLTEEEIKDLVQGCLKSKRQLNMGRDGL 277

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEE+TGG+IIYS+GGV+ LFRGRN
Sbjct: 278  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGRIIYSRGGVLLLFRGRN 337

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNY+TRPRFPLMLWKPVTP+YPRL+QRVPEGLTLEEA+EMRKKG +L PICKLGKNGVY 
Sbjct: 338  YNYRTRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEASEMRKKGWNLPPICKLGKNGVYS 397

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DL KNVREAFEECE+VRINCQGMN+SDY+KIGAKLKDL+PCVLISFE EHILMWRG+DWK
Sbjct: 398  DLAKNVREAFEECELVRINCQGMNKSDYQKIGAKLKDLVPCVLISFENEHILMWRGRDWK 457

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNESSEVPST 237
            SSL   + D  E   S+   D   +  PS +        + + L ++ESS + ++
Sbjct: 458  SSLVNPEDDSEEARQSEK--DCVTATPPSNDSVLLGEHQETLDLCDSESSNMDAS 510


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  684 bits (1765), Expect = 0.0
 Identities = 342/529 (64%), Positives = 394/529 (74%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK  IPFPIF                 +HRP  E+RFSRWNNANAE+FN+RRRAQQ  
Sbjct: 1    MALKLIIPFPIFSPPPNHNPNLNPNPP--NHRPATEIRFSRWNNANAEEFNQRRRAQQEI 58

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA +I                  NG  FKS GTPS PSRPSIPG+KSKY
Sbjct: 59   EDDIRRHRRFDSATKITQSYDSSTSTAT------NGVAFKSAGTPSSPSRPSIPGRKSKY 112

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+  K     +  P +   P   ++N+S+ EDGLSYVIDG+
Sbjct: 113  SKPATNSSVDHP-----AFRKISKREKTTNKSPEK---PAASKSNISITEDGLSYVIDGA 164

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTE PKAKP+KLRE  ++PFGPTTM RPWTGRAPLPPSKKK++EFDSF+LPPP
Sbjct: 165  PFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQLPPP 224

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            +KKGVKPVQ PGP+LPG+GP+YV +REEILG PLT EE+++L+    +S RQLNMGRDGL
Sbjct: 225  NKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVESVKRSSRQLNMGRDGL 284

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRR CKIKCKGVCTVDMDNV +QLEERTGGKIIY +GGV+YLFRGRN
Sbjct: 285  THNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRN 344

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNY+ RP FPLMLWKP+TP+YPRL+Q+VP+GLTLEEATEMRKKGR LIPICKLGKNGVY 
Sbjct: 345  YNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYC 404

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DL KNVREAFE CE+VRINCQGMN SDYRKIGAKL+DL+PCVLISFEREHILMWRG++WK
Sbjct: 405  DLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWK 464

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNES 255
            SS+ K   D  +  A +S VD + SV+P   G   +PS   ++LV   S
Sbjct: 465  SSILKPGNDSED--AKESKVDGSISVAPPTAGNGSAPSHTQMLLVEGGS 511


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  684 bits (1765), Expect = 0.0
 Identities = 342/529 (64%), Positives = 394/529 (74%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK  IPFPIF                 +HRP  E+RFSRWNNANAE+FN+RRRAQQ  
Sbjct: 7    MALKLIIPFPIFSPPPNHNPNLNPNPP--NHRPATEIRFSRWNNANAEEFNQRRRAQQEI 64

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA +I                  NG  FKS GTPS PSRPSIPG+KSKY
Sbjct: 65   EDDIRRHRRFDSATKITQSYDSSTSTAT------NGVAFKSAGTPSSPSRPSIPGRKSKY 118

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+  K     +  P +   P   ++N+S+ EDGLSYVIDG+
Sbjct: 119  SKPATNSSVDHP-----AFRKISKREKTTNKSPEK---PAASKSNISITEDGLSYVIDGA 170

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTE PKAKP+KLRE  ++PFGPTTM RPWTGRAPLPPSKKK++EFDSF+LPPP
Sbjct: 171  PFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQLPPP 230

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
            +KKGVKPVQ PGP+LPG+GP+YV +REEILG PLT EE+++L+    +S RQLNMGRDGL
Sbjct: 231  NKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVESVKRSSRQLNMGRDGL 290

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRR CKIKCKGVCTVDMDNV +QLEERTGGKIIY +GGV+YLFRGRN
Sbjct: 291  THNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRN 350

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNY+ RP FPLMLWKP+TP+YPRL+Q+VP+GLTLEEATEMRKKGR LIPICKLGKNGVY 
Sbjct: 351  YNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYC 410

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DL KNVREAFE CE+VRINCQGMN SDYRKIGAKL+DL+PCVLISFEREHILMWRG++WK
Sbjct: 411  DLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWK 470

Query: 401  SSLPKLDKDCREVMASDSGVDNAASVSPSLEGQEESPSSDPVVLVNNES 255
            SS+ K   D  +  A +S VD + SV+P   G   +PS   ++LV   S
Sbjct: 471  SSILKPGNDSED--AKESKVDGSISVAPPTAGNGSAPSHTQMLLVEGGS 517


>gb|KJB64997.1| hypothetical protein B456_010G075200 [Gossypium raimondii]
          Length = 732

 Score =  682 bits (1759), Expect = 0.0
 Identities = 341/522 (65%), Positives = 393/522 (75%), Gaps = 4/522 (0%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK PI FPIF                  HRPP E+RFSRWNNANAEKFN+RRRAQQ  
Sbjct: 1    MALKLPISFPIFSPPSPTPYTNTNEPG---HRPPTEIRFSRWNNANAEKFNQRRRAQQEI 57

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA +I                    +T+KS G+PS PS PSIPGKKSKY
Sbjct: 58   EDDIRRYRRFDSATKIATTVEPSSSSTPQPT-----ETYKSFGSPSSPSSPSIPGKKSKY 112

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+F K +      P +  P     ANV++GEDG+S+VIDG+
Sbjct: 113  SKPPNHP----------AFRKFSKAANPPPPSPLDKKP-----ANVAIGEDGVSFVIDGA 157

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETPK KP+KLREPPY+PFGPTTMPRPWTGRAPLPPSKKKM+EFDSF LPPP
Sbjct: 158  PFEFKYSYTETPKVKPVKLREPPYSPFGPTTMPRPWTGRAPLPPSKKKMKEFDSFVLPPP 217

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
             KKGVK +Q PGP+LPG+GP+YV SREEILG PLT EE+K+L+N C+KS+RQLNMGRDGL
Sbjct: 218  EKKGVKSIQKPGPYLPGTGPRYVQSREEILGEPLTAEEVKELVNSCLKSQRQLNMGRDGL 277

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDM+N+ +QLEERTGGK+I+ +GGV++LFRGRN
Sbjct: 278  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMNNICEQLEERTGGKVIFRRGGVLFLFRGRN 337

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRPRFPLMLWKPVTP+YPRL+ RVPEGLT +EATEMRKKGR L+PI KL KNGVY 
Sbjct: 338  YNYKTRPRFPLMLWKPVTPVYPRLIPRVPEGLTPQEATEMRKKGRKLMPIRKLAKNGVYA 397

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DLVKNVREAFEECE+VRINCQG+  SDY+KIGAKLK+L+PCVLISFE EHILMWRG +WK
Sbjct: 398  DLVKNVREAFEECELVRINCQGIKGSDYKKIGAKLKELVPCVLISFEDEHILMWRGNNWK 457

Query: 401  SSLPKLDKDCREVMASDSGVD----NAASVSPSLEGQEESPS 288
            SS  K         +S+SG++    +  S++  LEGQE SP+
Sbjct: 458  SSFSK--------PSSNSGIEKTNADTVSITGQLEGQELSPT 491


>ref|XP_012449395.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Gossypium
            raimondii] gi|763798041|gb|KJB64996.1| hypothetical
            protein B456_010G075200 [Gossypium raimondii]
          Length = 765

 Score =  682 bits (1759), Expect = 0.0
 Identities = 341/522 (65%), Positives = 393/522 (75%), Gaps = 4/522 (0%)
 Frame = -1

Query: 1841 MALKWPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQXX 1662
            MALK PI FPIF                  HRPP E+RFSRWNNANAEKFN+RRRAQQ  
Sbjct: 1    MALKLPISFPIFSPPSPTPYTNTNEPG---HRPPTEIRFSRWNNANAEKFNQRRRAQQEI 57

Query: 1661 XXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSKY 1482
                    RFDSA +I                    +T+KS G+PS PS PSIPGKKSKY
Sbjct: 58   EDDIRRYRRFDSATKIATTVEPSSSSTPQPT-----ETYKSFGSPSSPSSPSIPGKKSKY 112

Query: 1481 XXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVIDGS 1302
                             AFR+F K +      P +  P     ANV++GEDG+S+VIDG+
Sbjct: 113  SKPPNHP----------AFRKFSKAANPPPPSPLDKKP-----ANVAIGEDGVSFVIDGA 157

Query: 1301 PFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRLPPP 1122
            PFEFKYSYTETPK KP+KLREPPY+PFGPTTMPRPWTGRAPLPPSKKKM+EFDSF LPPP
Sbjct: 158  PFEFKYSYTETPKVKPVKLREPPYSPFGPTTMPRPWTGRAPLPPSKKKMKEFDSFVLPPP 217

Query: 1121 HKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGRDGL 942
             KKGVK +Q PGP+LPG+GP+YV SREEILG PLT EE+K+L+N C+KS+RQLNMGRDGL
Sbjct: 218  EKKGVKSIQKPGPYLPGTGPRYVQSREEILGEPLTAEEVKELVNSCLKSQRQLNMGRDGL 277

Query: 941  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFRGRN 762
            THNMLDNIHAHWKRRRVCKIKCKGVCTVDM+N+ +QLEERTGGK+I+ +GGV++LFRGRN
Sbjct: 278  THNMLDNIHAHWKRRRVCKIKCKGVCTVDMNNICEQLEERTGGKVIFRRGGVLFLFRGRN 337

Query: 761  YNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNGVYI 582
            YNYKTRPRFPLMLWKPVTP+YPRL+ RVPEGLT +EATEMRKKGR L+PI KL KNGVY 
Sbjct: 338  YNYKTRPRFPLMLWKPVTPVYPRLIPRVPEGLTPQEATEMRKKGRKLMPIRKLAKNGVYA 397

Query: 581  DLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGKDWK 402
            DLVKNVREAFEECE+VRINCQG+  SDY+KIGAKLK+L+PCVLISFE EHILMWRG +WK
Sbjct: 398  DLVKNVREAFEECELVRINCQGIKGSDYKKIGAKLKELVPCVLISFEDEHILMWRGNNWK 457

Query: 401  SSLPKLDKDCREVMASDSGVD----NAASVSPSLEGQEESPS 288
            SS  K         +S+SG++    +  S++  LEGQE SP+
Sbjct: 458  SSFSK--------PSSNSGIEKTNADTVSITGQLEGQELSPT 491


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  682 bits (1759), Expect = 0.0
 Identities = 369/616 (59%), Positives = 422/616 (68%), Gaps = 6/616 (0%)
 Frame = -1

Query: 1841 MALK-WPIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQX 1665
            MALK +P PFPIF                  HRP  EV FSRW NANA+KFN+R R+QQ 
Sbjct: 1    MALKLFPTPFPIFAPPSPNPS----------HRPSTEVHFSRWFNANADKFNQRYRSQQE 50

Query: 1664 XXXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKSIGTPSLPSRPSIPGKKSK 1485
                     RF SA  I                      FKS GTPS PS PSIPGKKSK
Sbjct: 51   IEEDISRRRRFTSANNIVTNYDPKNAAEVDISF------FKSTGTPSSPSSPSIPGKKSK 104

Query: 1484 YXXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENN---PPINRQANVSVGEDGLSYV 1314
            Y                   +  P    KI+ +P   N   PPI+R+A++ + EDG+SYV
Sbjct: 105  YSKPLK--------------KTHPAFLPKITRVPLPRNNAKPPIDRKADIKLSEDGVSYV 150

Query: 1313 IDGSPFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFR 1134
            IDG+PFEFKYSYTETPK KP+KLRE PYAPFGP TMPRPWTGRAPLPPSKKK+REFDSF 
Sbjct: 151  IDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLPPSKKKLREFDSFV 210

Query: 1133 LPPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMG 954
            LPPP KKGVKPVQAPGPFLPG+GP+Y  +REEILG PLT+EEI++L++GC+K+KRQLNMG
Sbjct: 211  LPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELVDGCLKAKRQLNMG 270

Query: 953  RDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLF 774
            RDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV QQLEERTGGKIIY KGGV+YLF
Sbjct: 271  RDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKIIYRKGGVLYLF 330

Query: 773  RGRNYNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKN 594
            RGRNYNY+ RPRFPLMLWKPVTP+YPRL+QR PEGLTL+EA+ MR KGR LIPICKLGKN
Sbjct: 331  RGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNKGRKLIPICKLGKN 390

Query: 593  GVYIDLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRG 414
            GVY DLV+NVREAFEECE+VRINCQGMN SD+RKIGAKL+DL+PCVLISFE EHILMWRG
Sbjct: 391  GVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLISFECEHILMWRG 450

Query: 413  KDWKSSLPKLDKDCREVMASDSGVDNAASVSPSLEG-QEESPSSDPVVLVNNESSEVPST 237
            +DWKSS  K   D  E  A +S +D A S +P LEG Q E+ S      +N ++S + + 
Sbjct: 451  RDWKSSFTKPVNDGDE--AKNSSIDGATSATPLLEGLQNETFSVKDASTLNLKTSRMDAE 508

Query: 236  TTPHXXXXXXXXXXXXXXSIIECVDPLAATDAVSTAGMTYGAKNVP-NVQSPADDVLEAI 60
                                 +  +  AA   +ST+   Y +K  P N  S A    EA+
Sbjct: 509  DQGEDLSQK------------DIDETFAAKIFISTSTEIYESKTTPDNDDSSAVTKSEAM 556

Query: 59   RNAGYSAAGRSDDPGY 12
            R A  S     DD GY
Sbjct: 557  RIASGSEV-ILDDRGY 571


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  676 bits (1744), Expect = 0.0
 Identities = 341/516 (66%), Positives = 394/516 (76%), Gaps = 3/516 (0%)
 Frame = -1

Query: 1841 MALKW-PIPFPIFXXXXXXXXXXXXXXXPSHHRPPGEVRFSRWNNANAEKFNERRRAQQX 1665
            MALK+ P+ FP+F                 HHRPP ++ FSRWNNANA +FN+RRRAQ+ 
Sbjct: 1    MALKFFPVQFPVFSPPLNPNLLSQT----QHHRPPSDIHFSRWNNANAREFNDRRRAQKE 56

Query: 1664 XXXXXXXXXRFDSAARIXXXXXXXXXXXXXXXXXSNGQTFKS--IGTPSLPSRPSIPGKK 1491
                     RF+SAA I                  + + FKS  IGTPS PS PSIPG+K
Sbjct: 57   IEEDIRRNRRFNSAANIIDNYDSAT----------SNENFKSKSIGTPSSPSAPSIPGRK 106

Query: 1490 SKYXXXXXXXXXXXXXXXXPAFRRFPKTSMKISNLPRENNPPINRQANVSVGEDGLSYVI 1311
            SKY                 AFR   K + K   LP +   PI+R A+V + EDGLS+V+
Sbjct: 107  SKYSKPESPTSHHP------AFRSISKITKK--PLPEK---PIDRNADVKLSEDGLSFVV 155

Query: 1310 DGSPFEFKYSYTETPKAKPIKLREPPYAPFGPTTMPRPWTGRAPLPPSKKKMREFDSFRL 1131
            DG+PFEFKYSYTETPKAKPIKLRE P++PFGPTTM RPWTGRAPLPPSKKK+REFDSF+L
Sbjct: 156  DGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPSKKKLREFDSFKL 215

Query: 1130 PPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGAPLTEEEIKDLINGCIKSKRQLNMGR 951
            PPP KKGVKPVQ PGPFLPG+GP+YV SREEILG PLT EE+K LI GC+K++RQLNMGR
Sbjct: 216  PPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEGCLKTRRQLNMGR 275

Query: 950  DGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEERTGGKIIYSKGGVIYLFR 771
            DGLTHNMLDNIHAHWKRRRVCKIKC GVCTVDMDNV QQLEERTGGK+IY KGGV+YLFR
Sbjct: 276  DGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRKGGVVYLFR 335

Query: 770  GRNYNYKTRPRFPLMLWKPVTPLYPRLVQRVPEGLTLEEATEMRKKGRSLIPICKLGKNG 591
            GRNYNY+TRPRFPLMLWKPVTP+YPRL++R PEGLTLEEA+EMR+KGR LIPICKL KNG
Sbjct: 336  GRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKLIPICKLAKNG 395

Query: 590  VYIDLVKNVREAFEECEIVRINCQGMNRSDYRKIGAKLKDLIPCVLISFEREHILMWRGK 411
            VY +LVK VREAFEECE+VRI+CQG+N SDYRK+GAKLK+L+PC+LISFE EHILMWRG+
Sbjct: 396  VYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHEHILMWRGR 455

Query: 410  DWKSSLPKLDKDCREVMASDSGVDNAASVSPSLEGQ 303
            DWKSS+ K   D  E + SD  V++A S++  LE Q
Sbjct: 456  DWKSSMIKPVNDSVEAIGSD--VNSATSIASVLEDQ 489